| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298546
Identifier: 146298546
GI number: 146298546
Start: 874925
End: 875662
Strand: Direct
Name: 146298546
Synonym: Fjoh_0784
Alternate gene names: NA
Gene position: 874925-875662 (Clockwise)
Preceding gene: 146298545
Following gene: 146298548
Centisome position: 14.35
GC content: 35.5
Gene sequence:
>738_bases ATGGCAATATCATCATCTAAAAAAAACTCACAAACAAACAGCTGCATTGCCGCCAATACTGTAACACCCGAAATTGATGG TATTTCAGTTGACTGCGTAATTTTTGGTTTCAAAAAAGAAAGCCTTGAAGTACTTTTAGTACAGCATGCCGGAGGAGAAA GCGAAGGAAGCTGGGGACTTCTTGGAGGCTGGATGAAAAGACAAGAAAGTGCCGATGATGCCGCTCACCGAATTATTTAT GAGCTTACAAGCCTCGATAACATTTATCTTGAGCAGTTAAAAGCATTTACAAATCCGAGTCGTGTTTTAGACCGCCGAAT TGTAACAATTGGATATTATACTCTCGTAAATCAGGAAGATTATAATGTAAAAGCCAGTTTAGATGTTCGAGAAGCAAAAT GGTGTAAGATTAAAGAAATCCCAAATTTAATTTTTGACCATAACGAAATTTTAAATTTCAGTTTATTACAGCTTCAAAAT CGTGTGCGCCAGGCACCAATTGGTTTTAATCTCCTGCCAGAAAAATTTACTTTATTGCAATTGATGCATTTGTATGAAGA AATTCTTGGAATTGAATTGGACAAATCAAACTTTCGACGAAAAATTCTGCACATGAAATTATTAGTCGCTCTAGACGAAA AACAACAGGACGTATCGCACAGAGCCGCAAAACTGTACAAATTTGATCCTGATATTTATAAAAAACTGACTGAAAAAGGA TTTAATTTTGAGTTTTAA
Upstream 100 bases:
>100_bases AGAGCAGCTAAACTATATAAGTTTGATCCGGATATTTATAAAAAACTGACTGAAAAAGGATTCAATTTTGAATTTTAAAA ACCGCTTATAAAAGCATACA
Downstream 100 bases:
>100_bases AACACAAATGGGCATCGATAATTGATGCCCATTTTTTATTTGAATTCAATTGGGTTATAAACAAGTCAAAACACAAGTAT AACCATCAAGCATAGGATAA
Product: NUDIX hydrolase
Products: NA
Alternate protein names: DNA Hydrolase; NUDIX Family Hydrolase; Nudix Hydrolase; Hydrolase NUDIX Family; ADP-Ribose Pyrophosphatase; Hydrolase; MutT/Nudix Family Protein; Hydrolase NUDIX Family Protein; Phosphohydrolase; NUDIX Domain-Containing Protein; Hydrolase Nudix Family; MutT/NUDIX Family DNA Hydrolase; Nudix Hydrolase Family Protein; MutT/Nudix Family DNA Hydrolase; NTP Pyrophosphohydrolase; Hydrolase MutT/Nudix Family Protein; Protein Containing NUDIX Domain; DNA Hydrolase Protein MutT/Nudix Family; Acetohydroxy Acid Isomeroreductase
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MAISSSKKNSQTNSCIAANTVTPEIDGISVDCVIFGFKKESLEVLLVQHAGGESEGSWGLLGGWMKRQESADDAAHRIIY ELTSLDNIYLEQLKAFTNPSRVLDRRIVTIGYYTLVNQEDYNVKASLDVREAKWCKIKEIPNLIFDHNEILNFSLLQLQN RVRQAPIGFNLLPEKFTLLQLMHLYEEILGIELDKSNFRRKILHMKLLVALDEKQQDVSHRAAKLYKFDPDIYKKLTEKG FNFEF
Sequences:
>Translated_245_residues MAISSSKKNSQTNSCIAANTVTPEIDGISVDCVIFGFKKESLEVLLVQHAGGESEGSWGLLGGWMKRQESADDAAHRIIY ELTSLDNIYLEQLKAFTNPSRVLDRRIVTIGYYTLVNQEDYNVKASLDVREAKWCKIKEIPNLIFDHNEILNFSLLQLQN RVRQAPIGFNLLPEKFTLLQLMHLYEEILGIELDKSNFRRKILHMKLLVALDEKQQDVSHRAAKLYKFDPDIYKKLTEKG FNFEF >Mature_244_residues AISSSKKNSQTNSCIAANTVTPEIDGISVDCVIFGFKKESLEVLLVQHAGGESEGSWGLLGGWMKRQESADDAAHRIIYE LTSLDNIYLEQLKAFTNPSRVLDRRIVTIGYYTLVNQEDYNVKASLDVREAKWCKIKEIPNLIFDHNEILNFSLLQLQNR VRQAPIGFNLLPEKFTLLQLMHLYEEILGIELDKSNFRRKILHMKLLVALDEKQQDVSHRAAKLYKFDPDIYKKLTEKGF NFEF
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28171; Mature: 28040
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISSSKKNSQTNSCIAANTVTPEIDGISVDCVIFGFKKESLEVLLVQHAGGESEGSWGL CCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCH LGGWMKRQESADDAAHRIIYELTSLDNIYLEQLKAFTNPSRVLDRRIVTIGYYTLVNQED HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEEECCCC YNVKASLDVREAKWCKIKEIPNLIFDHNEILNFSLLQLQNRVRQAPIGFNLLPEKFTLLQ CCEEEEEECCCCCCEEHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LMHLYEEILGIELDKSNFRRKILHMKLLVALDEKQQDVSHRAAKLYKFDPDIYKKLTEKG HHHHHHHHHCCEECHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHCC FNFEF CCCCC >Mature Secondary Structure AISSSKKNSQTNSCIAANTVTPEIDGISVDCVIFGFKKESLEVLLVQHAGGESEGSWGL CCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCH LGGWMKRQESADDAAHRIIYELTSLDNIYLEQLKAFTNPSRVLDRRIVTIGYYTLVNQED HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEEEECCCC YNVKASLDVREAKWCKIKEIPNLIFDHNEILNFSLLQLQNRVRQAPIGFNLLPEKFTLLQ CCEEEEEECCCCCCEEHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LMHLYEEILGIELDKSNFRRKILHMKLLVALDEKQQDVSHRAAKLYKFDPDIYKKLTEKG HHHHHHHHHCCEECHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHCC FNFEF CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA