| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146298533
Identifier: 146298533
GI number: 146298533
Start: 848781
End: 849329
Strand: Direct
Name: 146298533
Synonym: Fjoh_0771
Alternate gene names: NA
Gene position: 848781-849329 (Clockwise)
Preceding gene: 146298528
Following gene: 146298545
Centisome position: 13.92
GC content: 30.42
Gene sequence:
>549_bases ATGAGTTTTTTTGATATTATTGTAGCCGCACTTTTAGGTTATAGTTTATATAAAGGCATTAAAAACGGACTTTTTGTTGA AGTCGCTTCTTTTATTTCTTTGCTATTAGGAATTTATCTTGCCATAAAGTTTTCTTCATTAATGAGCGAAATGATTTCAA AACATGTTTCTTGGAATCCTACCAATATCCAGATTACGGCTTTTATTCTAACTTTTATTCTGGTTGTAATTGGCGTTTAT TTTCTGGCAAAAATATTAACCGGAATTGCCGATTTTGCCATGCTTGGCTGGATGAACAAACTTGGAGGCGGATTTTTCAG GGTTCTAAAAACTATTCTTATTCTAAGTATATTTATTGCTTTGTTTGAGAAAATTAATTTCAATAATACTTTCGCCAAAA AGGAAACTTTAGATAATACTATTTTTTATAATCCGGTTAAAAAAGTCGCTGCTTTTGTATATCCGTCAATTGAAAAATGG TACGACACTTTTAAAAAAGAACATTCTGAAAAAGCAGAAGAAAAAGAGCAAGCTACAAACAAGGAATAA
Upstream 100 bases:
>100_bases CAAAAATACTACTACAAAAACCTCTCAACCTTTGTCACTATCAAGCATTGAACCTGAAAAAAGATATATCTTTGCGCCTC ATTAAACACCAAACCAAAAC
Downstream 100 bases:
>100_bases TGCATTTTGTCAGGCTGAGCGAAGTCGAAGCCTCTCGTTTACAAATCAACAAACCCGACAGGTTTCAAAAACCTGTCAGG TTTATTATTAGAAAATCTCA
Product: colicin V production protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSFFDIIVAALLGYSLYKGIKNGLFVEVASFISLLLGIYLAIKFSSLMSEMISKHVSWNPTNIQITAFILTFILVVIGVY FLAKILTGIADFAMLGWMNKLGGGFFRVLKTILILSIFIALFEKINFNNTFAKKETLDNTIFYNPVKKVAAFVYPSIEKW YDTFKKEHSEKAEEKEQATNKE
Sequences:
>Translated_182_residues MSFFDIIVAALLGYSLYKGIKNGLFVEVASFISLLLGIYLAIKFSSLMSEMISKHVSWNPTNIQITAFILTFILVVIGVY FLAKILTGIADFAMLGWMNKLGGGFFRVLKTILILSIFIALFEKINFNNTFAKKETLDNTIFYNPVKKVAAFVYPSIEKW YDTFKKEHSEKAEEKEQATNKE >Mature_181_residues SFFDIIVAALLGYSLYKGIKNGLFVEVASFISLLLGIYLAIKFSSLMSEMISKHVSWNPTNIQITAFILTFILVVIGVYF LAKILTGIADFAMLGWMNKLGGGFFRVLKTILILSIFIALFEKINFNNTFAKKETLDNTIFYNPVKKVAAFVYPSIEKWY DTFKKEHSEKAEEKEQATNKE
Specific function: Unknown
COG id: COG1286
COG function: function code R; Uncharacterized membrane protein, required for colicin V production
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20683; Mature: 20552
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFDIIVAALLGYSLYKGIKNGLFVEVASFISLLLGIYLAIKFSSLMSEMISKHVSWNP CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TNIQITAFILTFILVVIGVYFLAKILTGIADFAMLGWMNKLGGGFFRVLKTILILSIFIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFEKINFNNTFAKKETLDNTIFYNPVKKVAAFVYPSIEKWYDTFKKEHSEKAEEKEQATN HHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KE CC >Mature Secondary Structure SFFDIIVAALLGYSLYKGIKNGLFVEVASFISLLLGIYLAIKFSSLMSEMISKHVSWNP CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TNIQITAFILTFILVVIGVYFLAKILTGIADFAMLGWMNKLGGGFFRVLKTILILSIFIA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFEKINFNNTFAKKETLDNTIFYNPVKKVAAFVYPSIEKWYDTFKKEHSEKAEEKEQATN HHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA