| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is dbpA [H]
Identifier: 146284217
GI number: 146284217
Start: 4234665
End: 4236203
Strand: Direct
Name: dbpA [H]
Synonym: PST_3905
Alternate gene names: 146284217
Gene position: 4234665-4236203 (Clockwise)
Preceding gene: 146284212
Following gene: 146284218
Centisome position: 92.71
GC content: 66.21
Gene sequence:
>1539_bases ATGGACAGTTTTCGATCAGCCGCCCCCCGCTGGGTTCAGTCTTCGCGCCTTTCAAAACGTTTCACCAGGCAGGCAGATAG CCATGCCGACCGCGCCGAACGCTCCTGCCGGCAGCCTGATAGACTGCAGACCGATTTCCATCCGAAGGCTCCAACCGTGT CCAGTCCCGCCTTTTCCACCCTGCCCCTTTCCGCCGCCATGCTGGCCAACCTCGAAGCCCTCGGCTACGCGACGATGACG CCGATCCAGGCGCAGAGCCTGCCGCTGATGCTCAAGGGGCACGACCTGATCGCCCAGGCCAAGACCGGTAGCGGCAAGAC CGCAGCCTTCGGCATCGCCCTGCTCGACCCGCTCAATCCACGCTATTTCGGCTGCCAGGCGCTGGTACTTTGCCCGACCC GCGAGCTGGCCGATCAGGTCGCCAAGGAGCTGCGCCGACTGGCGCGGGCAGCGGACAACATCAAGATCCTCACGCTGTGC GGCGGCGTCTCCATCGGCCCGCAGATCGCATCGCTGGAGCATGGCGCCCATGTGATCGTCGGTACGCCGGGGCGGGTGCA GGAGCACCTGAAGAAAGGCACCCTCAAGCTCGACGGCCTCAACACCCTGGTGCTCGATGAAGCCGACCGCATGCTGGACA TGGGCTTCTACGACGCCATCGCCGAGATCATCGGCCAGACCCCGGCCAAGCGGCAGACGCTGCTGTTCTCGGCCACCTAC CCCGCCAGCATCGAGCAGCTTGCCGCCAGTTTCATGCGTGCGCCGCAGCAGGTGCGGGTCGAGTCACTGCACACGGACTC GCAGATCGAGCAGCGCTTCTACGAGATCGACCCCGAGCAGCGTCTGGATGCGGTGGCGCGCCTGTTGGCCAGCTTCCGCC CGGAAAGCTGCGTGGCCTTCTGCTTCACCAAGCAGCAATGCCAGGAGCTGGTCGAGTACCTCAACGGCAAGGGCATCTCG GCAGCGGCGCTCAATGGCGATCTGGAGCAGCGTGATCGTGATCAGGTCCTGGCGATGTTCGCCAACCGCAGCCTGTCGGT GCTGGTGGCTACCGATGTCGCCGCCCGCGGGCTGGATATCGACGCATTGGACATGGTGATCAATGTCGAGCTGGCCCGCG ATCCGGAAATCCACGTCCACCGCATCGGCCGGACCGGACGCGCCGGCAACCAGGGCCTGGCCGCGAGCCTGGTGGCCCCA GCCGAAGCCCATCGTGCCCAGGCCATCGAGAAGCTGCAGAAGTCGCCGCTCAACTGGCATTCCCTGGACGAGCTGAAAGC CGGCGCGGGTGCGCCGCTGCAACCACCGATGGTGACGCTGTGCATCGCGGCCGGGCGCAAGGACAAGCTGCGCCCGGGCG ACATCCTGGGCGCCCTGACCGGCGACGCCGGCCTGCCGGGCAGCCAGGTCGGCAAGATCGCCATCTTCGACTTCCAGGCG TTCGTGGCGGTCGAACGCGATGCGGCCAAACAGGCCCTCAAGCGCCTGAACGAAGGTAAGATCAAGGGCCGCTCGCTGAA GGTCCGCGTGCTGCGCTGA
Upstream 100 bases:
>100_bases GTAGCGGCCATAAAGGGTGGGTTCGGCCGCGAACGCCGGTAGCGCCAACAGCCCGGCAAGGAAAAGAACGCGAGACAAAA CAACCTCCTGGGAGCGAATG
Downstream 100 bases:
>100_bases AGCCAGCCGCCGCCAAGCCGATAGCAAGCAGGCCAGCATCAGGCGGCCGGAGGGTTGAGCCCCGGCCGCGGCCGTGACAG CGTATGCACTGGCGCTGCCC
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MDSFRSAAPRWVQSSRLSKRFTRQADSHADRAERSCRQPDRLQTDFHPKAPTVSSPAFSTLPLSAAMLANLEALGYATMT PIQAQSLPLMLKGHDLIAQAKTGSGKTAAFGIALLDPLNPRYFGCQALVLCPTRELADQVAKELRRLARAADNIKILTLC GGVSIGPQIASLEHGAHVIVGTPGRVQEHLKKGTLKLDGLNTLVLDEADRMLDMGFYDAIAEIIGQTPAKRQTLLFSATY PASIEQLAASFMRAPQQVRVESLHTDSQIEQRFYEIDPEQRLDAVARLLASFRPESCVAFCFTKQQCQELVEYLNGKGIS AAALNGDLEQRDRDQVLAMFANRSLSVLVATDVAARGLDIDALDMVINVELARDPEIHVHRIGRTGRAGNQGLAASLVAP AEAHRAQAIEKLQKSPLNWHSLDELKAGAGAPLQPPMVTLCIAAGRKDKLRPGDILGALTGDAGLPGSQVGKIAIFDFQA FVAVERDAAKQALKRLNEGKIKGRSLKVRVLR
Sequences:
>Translated_512_residues MDSFRSAAPRWVQSSRLSKRFTRQADSHADRAERSCRQPDRLQTDFHPKAPTVSSPAFSTLPLSAAMLANLEALGYATMT PIQAQSLPLMLKGHDLIAQAKTGSGKTAAFGIALLDPLNPRYFGCQALVLCPTRELADQVAKELRRLARAADNIKILTLC GGVSIGPQIASLEHGAHVIVGTPGRVQEHLKKGTLKLDGLNTLVLDEADRMLDMGFYDAIAEIIGQTPAKRQTLLFSATY PASIEQLAASFMRAPQQVRVESLHTDSQIEQRFYEIDPEQRLDAVARLLASFRPESCVAFCFTKQQCQELVEYLNGKGIS AAALNGDLEQRDRDQVLAMFANRSLSVLVATDVAARGLDIDALDMVINVELARDPEIHVHRIGRTGRAGNQGLAASLVAP AEAHRAQAIEKLQKSPLNWHSLDELKAGAGAPLQPPMVTLCIAAGRKDKLRPGDILGALTGDAGLPGSQVGKIAIFDFQA FVAVERDAAKQALKRLNEGKIKGRSLKVRVLR >Mature_512_residues MDSFRSAAPRWVQSSRLSKRFTRQADSHADRAERSCRQPDRLQTDFHPKAPTVSSPAFSTLPLSAAMLANLEALGYATMT PIQAQSLPLMLKGHDLIAQAKTGSGKTAAFGIALLDPLNPRYFGCQALVLCPTRELADQVAKELRRLARAADNIKILTLC GGVSIGPQIASLEHGAHVIVGTPGRVQEHLKKGTLKLDGLNTLVLDEADRMLDMGFYDAIAEIIGQTPAKRQTLLFSATY PASIEQLAASFMRAPQQVRVESLHTDSQIEQRFYEIDPEQRLDAVARLLASFRPESCVAFCFTKQQCQELVEYLNGKGIS AAALNGDLEQRDRDQVLAMFANRSLSVLVATDVAARGLDIDALDMVINVELARDPEIHVHRIGRTGRAGNQGLAASLVAP AEAHRAQAIEKLQKSPLNWHSLDELKAGAGAPLQPPMVTLCIAAGRKDKLRPGDILGALTGDAGLPGSQVGKIAIFDFQA FVAVERDAAKQALKRLNEGKIKGRSLKVRVLR
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI45446747, Length=366, Percent_Identity=38.2513661202186, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI45446743, Length=366, Percent_Identity=38.2513661202186, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI7661920, Length=388, Percent_Identity=32.7319587628866, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI301171467, Length=366, Percent_Identity=38.2513661202186, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI87196351, Length=366, Percent_Identity=38.2513661202186, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI301171475, Length=366, Percent_Identity=38.2513661202186, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI50659095, Length=412, Percent_Identity=35.4368932038835, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI164664518, Length=386, Percent_Identity=31.0880829015544, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI148613856, Length=343, Percent_Identity=37.6093294460641, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI38201710, Length=343, Percent_Identity=37.6093294460641, Blast_Score=223, Evalue=4e-58, Organism=Homo sapiens, GI31542656, Length=378, Percent_Identity=37.3015873015873, Blast_Score=221, Evalue=9e-58, Organism=Homo sapiens, GI169881239, Length=365, Percent_Identity=38.0821917808219, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI13514809, Length=365, Percent_Identity=38.0821917808219, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI4758138, Length=399, Percent_Identity=33.5839598997494, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI13129006, Length=431, Percent_Identity=33.4106728538283, Blast_Score=216, Evalue=6e-56, Organism=Homo sapiens, GI262118318, Length=372, Percent_Identity=35.752688172043, Blast_Score=212, Evalue=6e-55, Organism=Homo sapiens, GI216548263, Length=372, Percent_Identity=35.752688172043, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI262231852, Length=372, Percent_Identity=35.752688172043, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI13518015, Length=372, Percent_Identity=35.752688172043, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI21071032, Length=360, Percent_Identity=37.2222222222222, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI224593278, Length=371, Percent_Identity=37.7358490566038, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI41327773, Length=357, Percent_Identity=36.9747899159664, Blast_Score=209, Evalue=6e-54, Organism=Homo sapiens, GI164419743, Length=353, Percent_Identity=35.9773371104816, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI51094101, Length=353, Percent_Identity=35.9773371104816, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI41327771, Length=436, Percent_Identity=32.7981651376147, Blast_Score=205, Evalue=7e-53, Organism=Homo sapiens, GI20149629, Length=372, Percent_Identity=34.4086021505376, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI222352149, Length=353, Percent_Identity=35.9773371104816, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI13514831, Length=377, Percent_Identity=35.5437665782493, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI4503529, Length=370, Percent_Identity=33.7837837837838, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI55749865, Length=374, Percent_Identity=31.283422459893, Blast_Score=193, Evalue=4e-49, Organism=Homo sapiens, GI83700235, Length=369, Percent_Identity=33.8753387533875, Blast_Score=192, Evalue=9e-49, Organism=Homo sapiens, GI4758112, Length=352, Percent_Identity=30.1136363636364, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI18375623, Length=352, Percent_Identity=30.1136363636364, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI21040371, Length=352, Percent_Identity=30.1136363636364, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI41327779, Length=383, Percent_Identity=31.5926892950392, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI188035877, Length=360, Percent_Identity=32.5, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI256223453, Length=355, Percent_Identity=30.1408450704225, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI38327634, Length=377, Percent_Identity=32.6259946949602, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI41327776, Length=368, Percent_Identity=30.9782608695652, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI6005743, Length=380, Percent_Identity=31.5789473684211, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI8922886, Length=418, Percent_Identity=30.1435406698565, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI164419732, Length=419, Percent_Identity=31.980906921241, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI17505907, Length=416, Percent_Identity=30.2884615384615, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=29.8245614035088, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI62241022, Length=379, Percent_Identity=30.3430079155673, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI38569503, Length=349, Percent_Identity=31.5186246418338, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI38569505, Length=349, Percent_Identity=31.5186246418338, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=31.044776119403, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI62241024, Length=357, Percent_Identity=29.9719887955182, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI9966805, Length=330, Percent_Identity=33.030303030303, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI20336298, Length=358, Percent_Identity=29.0502793296089, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI256773275, Length=409, Percent_Identity=29.3398533007335, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI154759257, Length=406, Percent_Identity=24.8768472906404, Blast_Score=102, Evalue=8e-22, Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=56.6739606126915, Blast_Score=496, Evalue=1e-141, Organism=Escherichia coli, GI87082221, Length=359, Percent_Identity=42.3398328690808, Blast_Score=281, Evalue=6e-77, Organism=Escherichia coli, GI1787016, Length=368, Percent_Identity=42.6630434782609, Blast_Score=265, Evalue=7e-72, Organism=Escherichia coli, GI1790214, Length=389, Percent_Identity=35.2185089974293, Blast_Score=209, Evalue=4e-55, Organism=Escherichia coli, GI1788930, Length=372, Percent_Identity=35.4838709677419, Blast_Score=193, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71995724, Length=389, Percent_Identity=33.9331619537275, Blast_Score=242, Evalue=4e-64, Organism=Caenorhabditis elegans, GI17507121, Length=389, Percent_Identity=33.6760925449871, Blast_Score=239, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=39.344262295082, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=39.4520547945205, Blast_Score=224, Evalue=8e-59, Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=39.344262295082, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI71987143, Length=363, Percent_Identity=33.8842975206612, Blast_Score=222, Evalue=3e-58, Organism=Caenorhabditis elegans, GI115533224, Length=343, Percent_Identity=38.4839650145773, Blast_Score=215, Evalue=5e-56, Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=36.6576819407008, Blast_Score=214, Evalue=6e-56, Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=36.7567567567568, Blast_Score=211, Evalue=9e-55, Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=36.3636363636364, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71995718, Length=367, Percent_Identity=37.3297002724796, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17507881, Length=374, Percent_Identity=34.7593582887701, Blast_Score=209, Evalue=4e-54, Organism=Caenorhabditis elegans, GI86570094, Length=345, Percent_Identity=38.5507246376812, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17552114, Length=354, Percent_Identity=30.225988700565, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71999646, Length=372, Percent_Identity=33.8709677419355, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71999644, Length=353, Percent_Identity=34.8441926345609, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17510559, Length=413, Percent_Identity=34.3825665859564, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17507945, Length=339, Percent_Identity=39.2330383480826, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI115532548, Length=388, Percent_Identity=33.5051546391753, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI115532546, Length=386, Percent_Identity=33.6787564766839, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17552642, Length=401, Percent_Identity=34.9127182044888, Blast_Score=199, Evalue=4e-51, Organism=Caenorhabditis elegans, GI32565321, Length=366, Percent_Identity=33.0601092896175, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI71982858, Length=352, Percent_Identity=30.3977272727273, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17509811, Length=380, Percent_Identity=33.4210526315789, Blast_Score=187, Evalue=8e-48, Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=29.3103448275862, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17537549, Length=376, Percent_Identity=32.7127659574468, Blast_Score=181, Evalue=8e-46, Organism=Caenorhabditis elegans, GI17505370, Length=365, Percent_Identity=32.0547945205479, Blast_Score=177, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17536099, Length=380, Percent_Identity=30.2631578947368, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17536101, Length=380, Percent_Identity=30.2631578947368, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI193208216, Length=379, Percent_Identity=31.9261213720317, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17536103, Length=380, Percent_Identity=30.2631578947368, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17553716, Length=374, Percent_Identity=28.3422459893048, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71990816, Length=379, Percent_Identity=29.5514511873351, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI25148203, Length=454, Percent_Identity=25.9911894273128, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17508543, Length=378, Percent_Identity=29.8941798941799, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17556951, Length=369, Percent_Identity=28.4552845528455, Blast_Score=134, Evalue=8e-32, Organism=Caenorhabditis elegans, GI17507641, Length=391, Percent_Identity=27.6214833759591, Blast_Score=131, Evalue=7e-31, Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=33.3333333333333, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25148291, Length=362, Percent_Identity=28.1767955801105, Blast_Score=126, Evalue=3e-29, Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=27.3458445040214, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI25148205, Length=340, Percent_Identity=25.2941176470588, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI71987152, Length=91, Percent_Identity=38.4615384615385, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6324217, Length=398, Percent_Identity=36.9346733668342, Blast_Score=236, Evalue=7e-63, Organism=Saccharomyces cerevisiae, GI6321360, Length=363, Percent_Identity=38.8429752066116, Blast_Score=225, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6325138, Length=361, Percent_Identity=37.6731301939058, Blast_Score=223, Evalue=7e-59, Organism=Saccharomyces cerevisiae, GI6320224, Length=369, Percent_Identity=32.7913279132791, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6324778, Length=375, Percent_Identity=36, Blast_Score=221, Evalue=3e-58, Organism=Saccharomyces cerevisiae, GI6323021, Length=359, Percent_Identity=35.3760445682451, Blast_Score=213, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6320041, Length=355, Percent_Identity=30.7042253521127, Blast_Score=209, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6321856, Length=378, Percent_Identity=36.2433862433862, Blast_Score=207, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6320449, Length=359, Percent_Identity=33.7047353760446, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6319618, Length=423, Percent_Identity=31.4420803782506, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6323947, Length=391, Percent_Identity=34.5268542199489, Blast_Score=189, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6322427, Length=385, Percent_Identity=32.987012987013, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6322912, Length=362, Percent_Identity=32.8729281767956, Blast_Score=187, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6322323, Length=362, Percent_Identity=32.8729281767956, Blast_Score=187, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=395, Percent_Identity=31.1392405063291, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=36.2666666666667, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=27.8089887640449, Blast_Score=173, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=30.2452316076294, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=411, Percent_Identity=29.1970802919708, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6320173, Length=209, Percent_Identity=36.8421052631579, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6321267, Length=344, Percent_Identity=29.3604651162791, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6320400, Length=369, Percent_Identity=26.5582655826558, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6323306, Length=454, Percent_Identity=25.3303964757709, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6322876, Length=464, Percent_Identity=26.5086206896552, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6324366, Length=361, Percent_Identity=23.8227146814404, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI24645031, Length=389, Percent_Identity=32.6478149100257, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI28574962, Length=343, Percent_Identity=39.9416909620991, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI21355075, Length=440, Percent_Identity=34.0909090909091, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI28575014, Length=370, Percent_Identity=37.8378378378378, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644479, Length=364, Percent_Identity=35.7142857142857, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI24644483, Length=364, Percent_Identity=35.7142857142857, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI281361218, Length=364, Percent_Identity=35.7142857142857, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24644481, Length=364, Percent_Identity=35.7142857142857, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24644487, Length=364, Percent_Identity=35.7142857142857, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI45551833, Length=364, Percent_Identity=35.7142857142857, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24644485, Length=364, Percent_Identity=35.7142857142857, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24584399, Length=396, Percent_Identity=34.8484848484849, Blast_Score=216, Evalue=4e-56, Organism=Drosophila melanogaster, GI24662330, Length=361, Percent_Identity=39.0581717451524, Blast_Score=215, Evalue=5e-56, Organism=Drosophila melanogaster, GI18857967, Length=375, Percent_Identity=36, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI17985987, Length=375, Percent_Identity=36.8, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI21356161, Length=356, Percent_Identity=36.7977528089888, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI24642151, Length=357, Percent_Identity=34.733893557423, Blast_Score=205, Evalue=6e-53, Organism=Drosophila melanogaster, GI24585582, Length=374, Percent_Identity=34.4919786096257, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI17977678, Length=397, Percent_Identity=33.2493702770781, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI17136814, Length=378, Percent_Identity=34.6560846560847, Blast_Score=198, Evalue=7e-51, Organism=Drosophila melanogaster, GI24582080, Length=362, Percent_Identity=32.8729281767956, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24582078, Length=362, Percent_Identity=32.8729281767956, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI17136248, Length=362, Percent_Identity=32.8729281767956, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24582075, Length=362, Percent_Identity=32.8729281767956, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI24583281, Length=354, Percent_Identity=29.9435028248588, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI24583279, Length=354, Percent_Identity=29.9435028248588, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24584994, Length=364, Percent_Identity=33.2417582417582, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI281365720, Length=322, Percent_Identity=36.9565217391304, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI28571808, Length=390, Percent_Identity=32.5641025641026, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI28571809, Length=390, Percent_Identity=32.5641025641026, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=30.8781869688385, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=30.8781869688385, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=30.8781869688385, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI21355559, Length=385, Percent_Identity=33.7662337662338, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI17647335, Length=367, Percent_Identity=30.2452316076294, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=33.1288343558282, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=29.3333333333333, Blast_Score=151, Evalue=8e-37, Organism=Drosophila melanogaster, GI28571338, Length=443, Percent_Identity=27.5395033860045, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI18859659, Length=443, Percent_Identity=27.5395033860045, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI24666101, Length=374, Percent_Identity=30.4812834224599, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI24643725, Length=401, Percent_Identity=26.9326683291771, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI19920478, Length=362, Percent_Identity=28.4530386740331, Blast_Score=128, Evalue=8e-30, Organism=Drosophila melanogaster, GI20130173, Length=439, Percent_Identity=27.1070615034169, Blast_Score=126, Evalue=4e-29, Organism=Drosophila melanogaster, GI24640164, Length=347, Percent_Identity=22.1902017291066, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI17136666, Length=209, Percent_Identity=29.6650717703349, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 55534; Mature: 55534
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSFRSAAPRWVQSSRLSKRFTRQADSHADRAERSCRQPDRLQTDFHPKAPTVSSPAFST CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC LPLSAAMLANLEALGYATMTPIQAQSLPLMLKGHDLIAQAKTGSGKTAAFGIALLDPLNP CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCEEEEEEEECCCCC RYFGCQALVLCPTRELADQVAKELRRLARAADNIKILTLCGGVSIGPQIASLEHGAHVIV CEECCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHCCCCCCEEEE GTPGRVQEHLKKGTLKLDGLNTLVLDEADRMLDMGFYDAIAEIIGQTPAKRQTLLFSATY ECCHHHHHHHHHCCEEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC PASIEQLAASFMRAPQQVRVESLHTDSQIEQRFYEIDPEQRLDAVARLLASFRPESCVAF CHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH CFTKQQCQELVEYLNGKGISAAALNGDLEQRDRDQVLAMFANRSLSVLVATDVAARGLDI HHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCC DALDMVINVELARDPEIHVHRIGRTGRAGNQGLAASLVAPAEAHRAQAIEKLQKSPLNWH HHEEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCC SLDELKAGAGAPLQPPMVTLCIAAGRKDKLRPGDILGALTGDAGLPGSQVGKIAIFDFQA CHHHHHCCCCCCCCCCCEEHEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHH FVAVERDAAKQALKRLNEGKIKGRSLKVRVLR HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC >Mature Secondary Structure MDSFRSAAPRWVQSSRLSKRFTRQADSHADRAERSCRQPDRLQTDFHPKAPTVSSPAFST CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC LPLSAAMLANLEALGYATMTPIQAQSLPLMLKGHDLIAQAKTGSGKTAAFGIALLDPLNP CCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCEEEEEEEECCCCC RYFGCQALVLCPTRELADQVAKELRRLARAADNIKILTLCGGVSIGPQIASLEHGAHVIV CEECCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHCCCCCCEEEE GTPGRVQEHLKKGTLKLDGLNTLVLDEADRMLDMGFYDAIAEIIGQTPAKRQTLLFSATY ECCHHHHHHHHHCCEEECCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC PASIEQLAASFMRAPQQVRVESLHTDSQIEQRFYEIDPEQRLDAVARLLASFRPESCVAF CHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH CFTKQQCQELVEYLNGKGISAAALNGDLEQRDRDQVLAMFANRSLSVLVATDVAARGLDI HHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECHHHCCCCC DALDMVINVELARDPEIHVHRIGRTGRAGNQGLAASLVAPAEAHRAQAIEKLQKSPLNWH HHEEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCC SLDELKAGAGAPLQPPMVTLCIAAGRKDKLRPGDILGALTGDAGLPGSQVGKIAIFDFQA CHHHHHCCCCCCCCCCCEEHEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEEHHH FVAVERDAAKQALKRLNEGKIKGRSLKVRVLR HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]