| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is gpmI
Identifier: 145300952
GI number: 145300952
Start: 4391237
End: 4392766
Strand: Direct
Name: gpmI
Synonym: ASA_4104
Alternate gene names: 145300952
Gene position: 4391237-4392766 (Clockwise)
Preceding gene: 145300948
Following gene: 145300953
Centisome position: 93.38
GC content: 60.98
Gene sequence:
>1530_bases ATGTCAACAGCTAAGAAACCTTTGGTTCTGGTCATCATGGACGGTTGGGGCTACAGCACCAAGCAAGAGCACAACGCCGT CGCTGCCGCCAAAACTCCCAACCTCGACCGTCTCGCCCGTGACTACACCAGCACCCTGATCTCCGGCTCCGGCCTGGATG TGGGTCTGCCGGATGGTCAGATGGGTAACTCCGAAGTGGGCCACGTCAACATAGGTGCCGGTCGCATCGTCTATCAGGAG CTGACCCGTATCTCCAAAGAGATCAAGGACGGCGACTTCTTCCAGAACGTCGAACTGGCCAAGGCTCTCGATTCTGCCGT GACCAAGGGCAAAGCCGTTCACATCATGGGTCTGATGTCCCCGGGTGGCGTACACAGCCACGAAGAGCACATCATGGGCA TGATCGAGATGGCCGCCAAGCGTGGCGCCGAGCAGATCTACTTCCACGCCTTCCTGGATGGCCGCGACGTTCCGCCGCGC TCCGCCCAGTCCTCCATCGAACAGTTCGATGCCCTGTTTGCCCGTCTGGGCAAGGGTCGTTTCGCCTCCATGATCGGCCG CTACTTCGCCATGGATCGTGACAACCGCTGGGATCGCGTGCAGCAAGCTTATGACCTGATGACTCAGGGCAAGGGCGAGT TCACCGCCGACAGCGCCAGCGAAGCCCTGGCCGCCGCCTATGCCCGCGACGAGAACGACGAGTTCGTCAAGGCCACCCGC ATCGGTGCTGCCGCCCCCATGCAGGATGGCGATGCCCTGATCTTCATGAACTTCCGTGCCGACCGCGCCCGTGAAATCAC CCGCGCCTTCGTTGACAGTGACTTCACCGGCTTTGCCCGTGCCGCCACCCCTGCGCTGAACTTCGTGATGCTGACCGAAT ACGCGGCCGACATCAAAACTGCCTGTGCCTACCCGCCGACTGCCCTGGTGAACACCCTGGGTGAGTGGCTGGCCAAGCAG GGCAAGACCCAGCTGCGCATCTCCGAAACCGAGAAGTACGCCCACGTCACCTTCTTCTTCAACGGTGGCGAAGAGTCCTG CTTCACCGGTGAAGACCGCGAGATCGTTGCCAGCCCGAAAGTGGCGACTTATGACCTGCAGCCGGAAATGAGCTCCGAAG AGCTGACCGACAAGCTGGTCGCTGCCATCAAGAGTGGCAAGTACGACACCATCATCTGCAACTACCCGAACGGCGACATG GTCGGCCACACCGGCGTATTCGATGCGGCCGTCAAAGCCTGTGAAGCCGTTGACCACTGCGTCGGTCGCGTCACCGAGGC CCTGGCCGAAGTAGGCGGCGAATGCCTGATCACCGCCGACCACGGCAACGCCGAGAAGATGCTGGACGAAGAGACCGGTC AGGCTCACACAGCCCACACCAACCTGCCGGTTCCCCTCATCTATTTCGGTCGCAAGGCCGAGGTGCTTGAAGGTGGCAAA CTGTCCGATCTGGCCCCGACCATGCTGACCCTGATGGGTCTTCCTGTGCCGCCGGAAATGACTGGCAAGCCCCTGATGAT TCTGAAATAA
Upstream 100 bases:
>100_bases GGCAAGGGCTTGGCTATCAGGTGACTATTTCGGCAGATGTAGTAATATTACGCTAGTTTCACTTCCCGCAATTCATTCCT ATCCGAGAGGACATAGCCTT
Downstream 100 bases:
>100_bases TCCTTCCCCATGCGGGGATGCGAAGTTATTTCAAACAAAACCAGTCGCGTCGGCCTGTTGGCCGGCGCGCTGTTTTTTTG CCTGTCGTTTATCGCGGGCA
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MSTAKKPLVLVIMDGWGYSTKQEHNAVAAAKTPNLDRLARDYTSTLISGSGLDVGLPDGQMGNSEVGHVNIGAGRIVYQE LTRISKEIKDGDFFQNVELAKALDSAVTKGKAVHIMGLMSPGGVHSHEEHIMGMIEMAAKRGAEQIYFHAFLDGRDVPPR SAQSSIEQFDALFARLGKGRFASMIGRYFAMDRDNRWDRVQQAYDLMTQGKGEFTADSASEALAAAYARDENDEFVKATR IGAAAPMQDGDALIFMNFRADRAREITRAFVDSDFTGFARAATPALNFVMLTEYAADIKTACAYPPTALVNTLGEWLAKQ GKTQLRISETEKYAHVTFFFNGGEESCFTGEDREIVASPKVATYDLQPEMSSEELTDKLVAAIKSGKYDTIICNYPNGDM VGHTGVFDAAVKACEAVDHCVGRVTEALAEVGGECLITADHGNAEKMLDEETGQAHTAHTNLPVPLIYFGRKAEVLEGGK LSDLAPTMLTLMGLPVPPEMTGKPLMILK
Sequences:
>Translated_509_residues MSTAKKPLVLVIMDGWGYSTKQEHNAVAAAKTPNLDRLARDYTSTLISGSGLDVGLPDGQMGNSEVGHVNIGAGRIVYQE LTRISKEIKDGDFFQNVELAKALDSAVTKGKAVHIMGLMSPGGVHSHEEHIMGMIEMAAKRGAEQIYFHAFLDGRDVPPR SAQSSIEQFDALFARLGKGRFASMIGRYFAMDRDNRWDRVQQAYDLMTQGKGEFTADSASEALAAAYARDENDEFVKATR IGAAAPMQDGDALIFMNFRADRAREITRAFVDSDFTGFARAATPALNFVMLTEYAADIKTACAYPPTALVNTLGEWLAKQ GKTQLRISETEKYAHVTFFFNGGEESCFTGEDREIVASPKVATYDLQPEMSSEELTDKLVAAIKSGKYDTIICNYPNGDM VGHTGVFDAAVKACEAVDHCVGRVTEALAEVGGECLITADHGNAEKMLDEETGQAHTAHTNLPVPLIYFGRKAEVLEGGK LSDLAPTMLTLMGLPVPPEMTGKPLMILK >Mature_508_residues STAKKPLVLVIMDGWGYSTKQEHNAVAAAKTPNLDRLARDYTSTLISGSGLDVGLPDGQMGNSEVGHVNIGAGRIVYQEL TRISKEIKDGDFFQNVELAKALDSAVTKGKAVHIMGLMSPGGVHSHEEHIMGMIEMAAKRGAEQIYFHAFLDGRDVPPRS AQSSIEQFDALFARLGKGRFASMIGRYFAMDRDNRWDRVQQAYDLMTQGKGEFTADSASEALAAAYARDENDEFVKATRI GAAAPMQDGDALIFMNFRADRAREITRAFVDSDFTGFARAATPALNFVMLTEYAADIKTACAYPPTALVNTLGEWLAKQG KTQLRISETEKYAHVTFFFNGGEESCFTGEDREIVASPKVATYDLQPEMSSEELTDKLVAAIKSGKYDTIICNYPNGDMV GHTGVFDAAVKACEAVDHCVGRVTEALAEVGGECLITADHGNAEKMLDEETGQAHTAHTNLPVPLIYFGRKAEVLEGGKL SDLAPTMLTLMGLPVPPEMTGKPLMILK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family
Homologues:
Organism=Escherichia coli, GI1790041, Length=514, Percent_Identity=71.5953307392996, Blast_Score=761, Evalue=0.0, Organism=Caenorhabditis elegans, GI17507741, Length=511, Percent_Identity=45.0097847358121, Blast_Score=430, Evalue=1e-121, Organism=Caenorhabditis elegans, GI32564249, Length=511, Percent_Identity=45.0097847358121, Blast_Score=430, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GPMI_AERS4 (A4ST23)
Other databases:
- EMBL: CP000644 - RefSeq: YP_001143793.1 - ProteinModelPortal: A4ST23 - SMR: A4ST23 - STRING: A4ST23 - GeneID: 4997160 - GenomeReviews: CP000644_GR - KEGG: asa:ASA_4104 - eggNOG: COG0696 - HOGENOM: HBG613255 - OMA: DNKTDEF - PhylomeDB: A4ST23 - ProtClustDB: PRK05434 - BioCyc: ASAL382245:ASA_4104-MONOMER - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_01038 - InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 - Gene3D: G3DSA:3.40.720.10 - Gene3D: G3DSA:3.40.1450.10 - PIRSF: PIRSF001492 - TIGRFAMs: TIGR01307
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core; SSF64158 BPG-indep_PGM_N
EC number: =5.4.2.1
Molecular weight: Translated: 55276; Mature: 55145
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: ACT_SITE 64-64
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAKKPLVLVIMDGWGYSTKQEHNAVAAAKTPNLDRLARDYTSTLISGSGLDVGLPDGQ CCCCCCCEEEEEECCCCCCCCHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC MGNSEVGHVNIGAGRIVYQELTRISKEIKDGDFFQNVELAKALDSAVTKGKAVHIMGLMS CCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECC PGGVHSHEEHIMGMIEMAAKRGAEQIYFHAFLDGRDVPPRSAQSSIEQFDALFARLGKGR CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCH FASMIGRYFAMDRDNRWDRVQQAYDLMTQGKGEFTADSASEALAAAYARDENDEFVKATR HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH IGAAAPMQDGDALIFMNFRADRAREITRAFVDSDFTGFARAATPALNFVMLTEYAADIKT CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ACAYPPTALVNTLGEWLAKQGKTQLRISETEKYAHVTFFFNGGEESCFTGEDREIVASPK HCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCEEEECCC VATYDLQPEMSSEELTDKLVAAIKSGKYDTIICNYPNGDMVGHTGVFDAAVKACEAVDHC EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH VGRVTEALAEVGGECLITADHGNAEKMLDEETGQAHTAHTNLPVPLIYFGRKAEVLEGGK HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEECCCCCEEEEEECCCHHHCCCCC LSDLAPTMLTLMGLPVPPEMTGKPLMILK CCHHHHHHHHHHCCCCCCCCCCCCEEEEC >Mature Secondary Structure STAKKPLVLVIMDGWGYSTKQEHNAVAAAKTPNLDRLARDYTSTLISGSGLDVGLPDGQ CCCCCCEEEEEECCCCCCCCHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC MGNSEVGHVNIGAGRIVYQELTRISKEIKDGDFFQNVELAKALDSAVTKGKAVHIMGLMS CCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECC PGGVHSHEEHIMGMIEMAAKRGAEQIYFHAFLDGRDVPPRSAQSSIEQFDALFARLGKGR CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCH FASMIGRYFAMDRDNRWDRVQQAYDLMTQGKGEFTADSASEALAAAYARDENDEFVKATR HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH IGAAAPMQDGDALIFMNFRADRAREITRAFVDSDFTGFARAATPALNFVMLTEYAADIKT CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ACAYPPTALVNTLGEWLAKQGKTQLRISETEKYAHVTFFFNGGEESCFTGEDREIVASPK HCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEEECCCCCCCCCCCCEEEECCC VATYDLQPEMSSEELTDKLVAAIKSGKYDTIICNYPNGDMVGHTGVFDAAVKACEAVDHC EEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH VGRVTEALAEVGGECLITADHGNAEKMLDEETGQAHTAHTNLPVPLIYFGRKAEVLEGGK HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEECCCCCEEEEEECCCHHHCCCCC LSDLAPTMLTLMGLPVPPEMTGKPLMILK CCHHHHHHHHHHCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA