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The map label for this gene is yibP [H]

Identifier: 145300953

GI number: 145300953

Start: 4392776

End: 4394182

Strand: Direct

Name: yibP [H]

Synonym: ASA_4105

Alternate gene names: 145300953

Gene position: 4392776-4394182 (Clockwise)

Preceding gene: 145300952

Following gene: 145300955

Centisome position: 93.42

GC content: 60.27

Gene sequence:

>1407_bases
ATGCGGGGATGCGAAGTTATTTCAAACAAAACCAGTCGCGTCGGCCTGTTGGCCGGCGCGCTGTTTTTTTGCCTGTCGTT
TATCGCGGGCAAGGCCCTGGCTGCCAACCAGCAGCTCGGCAACATGCAGTCCCAGATAAAGGAACAGCAGAAAACCATCA
AGCTCAGCAAGCAAGAGCTGACCAAACTCAATACTCAGCTCAAGGCTGACGAGCAGGCCATTTCGGCCGCAGCGGCCAAG
CTCGAGCAGACCAGGCAACAGCTGAAAAAAAACCAGCAAAAGCTGGTAAGCCTGCAACAGGACAAGCTGGATCTGGAACA
ACAGGCAAAGCATCAGAAGCAGTTGCTGGCCAAGCAGGCGGAAAGCGCCTTCCAGGCGGGCAACCACGATTACCTCAAAC
TACTGCTCAACCAGCAGGATCCGGCCAAACTGAGCCGCTCTCTCGACTACTACGACTATCTCAACAAGGCCCGCATCGAG
GCCATCGAAGCCCTGCGCGCGACCCGCACCAAGCTGGCCAAAAACCAGCAGGCCACCAAAGAGACCGAGAGCAAGCTGCA
ATCCTTGCTGAGCGAACAGCAACAGCATCACCAGAGCCTGTTGGCCAGCCAGCAGAGCCGTGCCAAGGTGCGCAACCAGT
TGCAACAATCGGTGCAAAACGACGAGCTGAAGCTGACCAAGCTGGTCAAGGCGGAAAAAGCCCTGAAAGCCAGGCTGGAA
GAGCTTCGCCGCCAGCGGGAAGAGCAGGAGCGTCGCGAGCGGGCAGAGCGGGAACGGCTGGCCAAGCTGAAAGCCGAGCA
GGAACGCCAGCGCCGTCTGGAGGCCCAACGACTGGCCGCCGAACAGAAACGGATTGCAGAACAACAGCGGATCGCGGCTC
AACAACAGAAGGTCGGCGAGCAGCAACGACTCGCCGCCGAGCAGCAGAGAGTCGCCGAACAACAAGACAGGGTGGCTGAT
CAGCAAGCCGCTGCGCGCAGCAGCAGCGCCAAGGCAAGCAGTGGCGGCTACGGCGGTCTCAAGACCAACGGCAGCCTGCG
CTGGCCGGTGCAGGGGCCCATCCTCATCTCCTATGGCTCGCCGCGCACCGCCCAGCTCAAGTGGAAGGGCACTCTGATCG
GTGCCAGCGAAGGTACCCAGGTCAAGGCGGTCGCACCGGGCCAGATAGTCTACGCCGACTGGCTGGACGGTTTCGGCATG
TTGCTGGTGATCGACCATGGCCGTGGCTATATGAGCCTCTATGGTCACAATCAGTCGCTGCTGCGCCAGGTTGGCCAGAA
TGTGGAACAGGGCGAACCTGTGGCTCTGGTCGGCGACAGTGGCGGCCAGGACAGACCCGGCCTCTACTTCGAGATCCGCT
ATCAGGGTGAGGCCATCAACCCGACAAAATGGTTGGCCAAGGGCTGA

Upstream 100 bases:

>100_bases
ACTGTCCGATCTGGCCCCGACCATGCTGACCCTGATGGGTCTTCCTGTGCCGCCGGAAATGACTGGCAAGCCCCTGATGA
TTCTGAAATAATCCTTCCCC

Downstream 100 bases:

>100_bases
TCAGATATGCCGGATAATGCATTGATCCCCTCAAAGGGGATTGACCAAGAGCCGACTGATCACTGGTCAGCCAAAATGAC
AAAAAGCCTGCATTACGCAG

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MRGCEVISNKTSRVGLLAGALFFCLSFIAGKALAANQQLGNMQSQIKEQQKTIKLSKQELTKLNTQLKADEQAISAAAAK
LEQTRQQLKKNQQKLVSLQQDKLDLEQQAKHQKQLLAKQAESAFQAGNHDYLKLLLNQQDPAKLSRSLDYYDYLNKARIE
AIEALRATRTKLAKNQQATKETESKLQSLLSEQQQHHQSLLASQQSRAKVRNQLQQSVQNDELKLTKLVKAEKALKARLE
ELRRQREEQERRERAERERLAKLKAEQERQRRLEAQRLAAEQKRIAEQQRIAAQQQKVGEQQRLAAEQQRVAEQQDRVAD
QQAAARSSSAKASSGGYGGLKTNGSLRWPVQGPILISYGSPRTAQLKWKGTLIGASEGTQVKAVAPGQIVYADWLDGFGM
LLVIDHGRGYMSLYGHNQSLLRQVGQNVEQGEPVALVGDSGGQDRPGLYFEIRYQGEAINPTKWLAKG

Sequences:

>Translated_468_residues
MRGCEVISNKTSRVGLLAGALFFCLSFIAGKALAANQQLGNMQSQIKEQQKTIKLSKQELTKLNTQLKADEQAISAAAAK
LEQTRQQLKKNQQKLVSLQQDKLDLEQQAKHQKQLLAKQAESAFQAGNHDYLKLLLNQQDPAKLSRSLDYYDYLNKARIE
AIEALRATRTKLAKNQQATKETESKLQSLLSEQQQHHQSLLASQQSRAKVRNQLQQSVQNDELKLTKLVKAEKALKARLE
ELRRQREEQERRERAERERLAKLKAEQERQRRLEAQRLAAEQKRIAEQQRIAAQQQKVGEQQRLAAEQQRVAEQQDRVAD
QQAAARSSSAKASSGGYGGLKTNGSLRWPVQGPILISYGSPRTAQLKWKGTLIGASEGTQVKAVAPGQIVYADWLDGFGM
LLVIDHGRGYMSLYGHNQSLLRQVGQNVEQGEPVALVGDSGGQDRPGLYFEIRYQGEAINPTKWLAKG
>Mature_468_residues
MRGCEVISNKTSRVGLLAGALFFCLSFIAGKALAANQQLGNMQSQIKEQQKTIKLSKQELTKLNTQLKADEQAISAAAAK
LEQTRQQLKKNQQKLVSLQQDKLDLEQQAKHQKQLLAKQAESAFQAGNHDYLKLLLNQQDPAKLSRSLDYYDYLNKARIE
AIEALRATRTKLAKNQQATKETESKLQSLLSEQQQHHQSLLASQQSRAKVRNQLQQSVQNDELKLTKLVKAEKALKARLE
ELRRQREEQERRERAERERLAKLKAEQERQRRLEAQRLAAEQKRIAEQQRIAAQQQKVGEQQRLAAEQQRVAEQQDRVAD
QQAAARSSSAKASSGGYGGLKTNGSLRWPVQGPILISYGSPRTAQLKWKGTLIGASEGTQVKAVAPGQIVYADWLDGFGM
LLVIDHGRGYMSLYGHNQSLLRQVGQNVEQGEPVALVGDSGGQDRPGLYFEIRYQGEAINPTKWLAKG

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=452, Percent_Identity=34.2920353982301, Blast_Score=218, Evalue=7e-58,
Organism=Escherichia coli, GI1789099, Length=120, Percent_Identity=36.6666666666667, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI87082174, Length=119, Percent_Identity=35.2941176470588, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87081989, Length=125, Percent_Identity=31.2, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 52501; Mature: 52501

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHCCC
>Mature Secondary Structure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HHHHCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]