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The map label for this gene is bkdR [H]

Identifier: 145300442

GI number: 145300442

Start: 3860327

End: 3860803

Strand: Direct

Name: bkdR [H]

Synonym: ASA_3568

Alternate gene names: 145300442

Gene position: 3860327-3860803 (Clockwise)

Preceding gene: 145300441

Following gene: 145300446

Centisome position: 82.09

GC content: 60.38

Gene sequence:

>477_bases
ATGCTGAAACTTGATCGCATAGACAGGCATATTCTGGAGTTGATGCAGGAGAATGGCCGCATCAGCAACCTGGAGCTGGC
CGAGCTGGTCGGGCTCTCCCCCTCCCCCTGCTCCCGCCGGGTCAAGGCGCTGGAGGATGCCGGTCTCATCGATACCCACG
TCACCCTGCTCAACGCCCGCCAGCTGGGACTCACCCTCACCGCTTATATCCATATCTCCATGGACAGACACACGCCGGAA
CGGTTCGAGAACTTCGACAAGGCCATCAAGGAGCTGCCCGAAGTGCTGGAGTGCGACCTCATCACGGGCAACGATGCCGA
CTATCAGCTCAAGGTAGTGGTGCGGGACATGGAGCACTACCAGCACTTCCTGCTGGACAAGCTGACCCACATACCGGGCG
TGACCGGCGTCCGTTCCAGCTTCGTGCTGCGCCGCATCAAGCACAAGACGGCACTGCCGCTGAACCATCTGGGGTAA

Upstream 100 bases:

>100_bases
GGTGAGTGGTTGCGAAGTAGCATGCATTTTCAGTTGTTTTTGCAATAGTTCACCCTTAATCTAGGAAAAGTGAATTAATA
ATTGCAACGAGGAACGGAGA

Downstream 100 bases:

>100_bases
GGGATCAGCATGCTGCCATGTGTCCACCTCGACACGCGAGGTGAGGCGGATTGGAGCATGAGAGACCCCTGACGAAGAGA
GGAGGCCCCGGGGCCTCCTC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MLKLDRIDRHILELMQENGRISNLELAELVGLSPSPCSRRVKALEDAGLIDTHVTLLNARQLGLTLTAYIHISMDRHTPE
RFENFDKAIKELPEVLECDLITGNDADYQLKVVVRDMEHYQHFLLDKLTHIPGVTGVRSSFVLRRIKHKTALPLNHLG

Sequences:

>Translated_158_residues
MLKLDRIDRHILELMQENGRISNLELAELVGLSPSPCSRRVKALEDAGLIDTHVTLLNARQLGLTLTAYIHISMDRHTPE
RFENFDKAIKELPEVLECDLITGNDADYQLKVVVRDMEHYQHFLLDKLTHIPGVTGVRSSFVLRRIKHKTALPLNHLG
>Mature_158_residues
MLKLDRIDRHILELMQENGRISNLELAELVGLSPSPCSRRVKALEDAGLIDTHVTLLNARQLGLTLTAYIHISMDRHTPE
RFENFDKAIKELPEVLECDLITGNDADYQLKVVVRDMEHYQHFLLDKLTHIPGVTGVRSSFVLRRIKHKTALPLNHLG

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=149, Percent_Identity=43.6241610738255, Blast_Score=130, Evalue=4e-32,
Organism=Escherichia coli, GI87081742, Length=152, Percent_Identity=38.8157894736842, Blast_Score=115, Evalue=1e-27,
Organism=Escherichia coli, GI1790182, Length=150, Percent_Identity=28, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18037; Mature: 18037

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLDRIDRHILELMQENGRISNLELAELVGLSPSPCSRRVKALEDAGLIDTHVTLLNAR
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
QLGLTLTAYIHISMDRHTPERFENFDKAIKELPEVLECDLITGNDADYQLKVVVRDMEHY
HHCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEHHHHHHHHHH
QHFLLDKLTHIPGVTGVRSSFVLRRIKHKTALPLNHLG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLKLDRIDRHILELMQENGRISNLELAELVGLSPSPCSRRVKALEDAGLIDTHVTLLNAR
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
QLGLTLTAYIHISMDRHTPERFENFDKAIKELPEVLECDLITGNDADYQLKVVVRDMEHY
HHCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEHHHHHHHHHH
QHFLLDKLTHIPGVTGVRSSFVLRRIKHKTALPLNHLG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]