| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300441
Identifier: 145300441
GI number: 145300441
Start: 3859395
End: 3860018
Strand: Direct
Name: 145300441
Synonym: ASA_3567
Alternate gene names: NA
Gene position: 3859395-3860018 (Clockwise)
Preceding gene: 145300438
Following gene: 145300442
Centisome position: 82.07
GC content: 64.1
Gene sequence:
>624_bases ATGAACGCCAGCACCGACAAGATACTGTTTCTGCTCAAGAGTCACGGCCCCCAGAGCGCAGCCGCGCTGGGGGAGCAGTT GCAGATGACCTCCATGGGCGCCCGCCAGCATCTGATCGCGCTGGAATCCGACGGCTGGGTGGGTTTTAGCGATGAAACGC GCGGCCGTGGCCGCCCCGTGCGCCTGTGGCATCTGACCGAACAGGCCTGGCAGCGCTTCCCCGATACCCACAGCGAACTG ACCTTGCAGCTTATCGACAATATCCAGCAGCTGTTTGGCGAGGTGGGCATGGAGCGACTGATCCAGCAGCGTGAGCAGCA ACAGCTGGGCCGTTATCAGGCACAGCTGACCCAGCCTACGCTGGCAGACAGGCTGGCCACGTTGAAAGAGCAGCGCACGC GAGAGGGCTATATGGCAGATATGCGCCAGGAGGAGGACGGCAGCTGGTTGCTATGGGAGAGCCACTGCCCCATCTGCGCC GCGGCGCGGGCCTGTCGGGGCTTTTGTCGCAGCGAGCTGGAGATGTTTCGCCAGTTGCTGGCACCGGCCAGGGTGGAGCG GGAACAATACCTGCTGGACGGGGATCACCGCTGCCTCTACCGCATCACGCCGCCGACCCCGTGA
Upstream 100 bases:
>100_bases CGGCCGCTATCCATAATGATCCCATGAACATCCGTACTGACAAGATCCTCTTCCGATACCCTGAATCCTTGGCGTACCTG TCGATAACGGGAAGCCCTCA
Downstream 100 bases:
>100_bases TCGCCGAATGCCAGAAACAACAAAGCAGGCGCCGGGATGCCTGCTTTGTTGCCTTCGGGGAGGAGGTGCTCTCGTTCCAG CCCGTCGTTTCCCGATAAGG
Product: transcriptional regulator
Products: NA
Alternate protein names: HTH Domain Family; Transcriptional Regulatory Protein; DeoR Family Transcriptional Regulator; Transcription Regulator Protein; MarR Family Transcriptional Regulator; Regulatory Protein ArsR; Regulatory Proteins AsnC Family Protein; Transcriptional Regulator DeoR Family; Transcriptional Regulator Protein; ArsR Family Transcriptional Regulator; Transcriptional Regulator ArsR Family; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator; Sugar-Specific Transcriptional Regulator TrmB; HTH Domain Family Protein; Transcriptional Regulator TrmB
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNASTDKILFLLKSHGPQSAAALGEQLQMTSMGARQHLIALESDGWVGFSDETRGRGRPVRLWHLTEQAWQRFPDTHSEL TLQLIDNIQQLFGEVGMERLIQQREQQQLGRYQAQLTQPTLADRLATLKEQRTREGYMADMRQEEDGSWLLWESHCPICA AARACRGFCRSELEMFRQLLAPARVEREQYLLDGDHRCLYRITPPTP
Sequences:
>Translated_207_residues MNASTDKILFLLKSHGPQSAAALGEQLQMTSMGARQHLIALESDGWVGFSDETRGRGRPVRLWHLTEQAWQRFPDTHSEL TLQLIDNIQQLFGEVGMERLIQQREQQQLGRYQAQLTQPTLADRLATLKEQRTREGYMADMRQEEDGSWLLWESHCPICA AARACRGFCRSELEMFRQLLAPARVEREQYLLDGDHRCLYRITPPTP >Mature_207_residues MNASTDKILFLLKSHGPQSAAALGEQLQMTSMGARQHLIALESDGWVGFSDETRGRGRPVRLWHLTEQAWQRFPDTHSEL TLQLIDNIQQLFGEVGMERLIQQREQQQLGRYQAQLTQPTLADRLATLKEQRTREGYMADMRQEEDGSWLLWESHCPICA AARACRGFCRSELEMFRQLLAPARVEREQYLLDGDHRCLYRITPPTP
Specific function: Unknown
COG id: COG2345
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23880; Mature: 23880
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASTDKILFLLKSHGPQSAAALGEQLQMTSMGARQHLIALESDGWVGFSDETRGRGRPV CCCCHHHHEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCE RLWHLTEQAWQRFPDTHSELTLQLIDNIQQLFGEVGMERLIQQREQQQLGRYQAQLTQPT EEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LADRLATLKEQRTREGYMADMRQEEDGSWLLWESHCPICAAARACRGFCRSELEMFRQLL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH APARVEREQYLLDGDHRCLYRITPPTP HHHHHHHHHHHCCCCCEEEEEECCCCC >Mature Secondary Structure MNASTDKILFLLKSHGPQSAAALGEQLQMTSMGARQHLIALESDGWVGFSDETRGRGRPV CCCCHHHHEEEECCCCCHHHHHHHHHHHHHHHCCHHHEEEEECCCCCCCCCCCCCCCCCE RLWHLTEQAWQRFPDTHSELTLQLIDNIQQLFGEVGMERLIQQREQQQLGRYQAQLTQPT EEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LADRLATLKEQRTREGYMADMRQEEDGSWLLWESHCPICAAARACRGFCRSELEMFRQLL HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH APARVEREQYLLDGDHRCLYRITPPTP HHHHHHHHHHHCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA