| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is osmC [C]
Identifier: 145300446
GI number: 145300446
Start: 3862212
End: 3862658
Strand: Direct
Name: osmC [C]
Synonym: ASA_3572
Alternate gene names: 145300446
Gene position: 3862212-3862658 (Clockwise)
Preceding gene: 145300442
Following gene: 145300447
Centisome position: 82.13
GC content: 63.76
Gene sequence:
>447_bases GTGAAAACACTCTATCGCACACAGGCCATCGCCCAGGCAGGCCGCAACGGCGAAGTTCACACCCTGGACAACAGCCTGCA ACTGGCACTGGCCCTGCCAACCGCCCTCGGCGGCAACGGCAAGGGCAACAATCCGGAGCAACTGCTGGCCGCTGGCTACG CCGCCTGTTTCTCCAACGCCCTGATCCACGTGGCCCAGAAACTCGGCGCACCCATCACCAGCGCGCCGGTCACGGCCAGC GTCGAGTTGCTGGCACTGGCCGATGGCCGCTTCAACTTTGCCATCACGCTGGACGTGGCGCTCGCCGCAGCGCAGCCTGA ACAGATGGCGCAGGCCGAGCAGCTAGTGCGGCTGGCCCACCAGACCTGCCCCTTCTCAAATGCCATTCGGGGCAATGTCG TCACCCGCCTGCGGCTAAACGATATCGAACTGGAGGAAAAACAATGA
Upstream 100 bases:
>100_bases ATTCACTCATGGGGGCACCTCATTGGCAAGTGGGGCCAGTATACCCCAGCAAGGTGGAGGGAAAAATGATTTGCACACAA AACAAATCAGAGCACCCGAC
Downstream 100 bases:
>100_bases GTCTGCTCAGTCATCAAATCCAGCTGCTGCGCCGCCCGGTCGGTATGCCCAGTCAGGACGATTTCATCCAGGCCGAGGTC GCGCTGCCCGAGTTACAGGA
Product: osmotically inducible protein C
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKTLYRTQAIAQAGRNGEVHTLDNSLQLALALPTALGGNGKGNNPEQLLAAGYAACFSNALIHVAQKLGAPITSAPVTAS VELLALADGRFNFAITLDVALAAAQPEQMAQAEQLVRLAHQTCPFSNAIRGNVVTRLRLNDIELEEKQ
Sequences:
>Translated_148_residues MKTLYRTQAIAQAGRNGEVHTLDNSLQLALALPTALGGNGKGNNPEQLLAAGYAACFSNALIHVAQKLGAPITSAPVTAS VELLALADGRFNFAITLDVALAAAQPEQMAQAEQLVRLAHQTCPFSNAIRGNVVTRLRLNDIELEEKQ >Mature_148_residues MKTLYRTQAIAQAGRNGEVHTLDNSLQLALALPTALGGNGKGNNPEQLLAAGYAACFSNALIHVAQKLGAPITSAPVTAS VELLALADGRFNFAITLDVALAAAQPEQMAQAEQLVRLAHQTCPFSNAIRGNVVTRLRLNDIELEEKQ
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
None
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR019953 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 15658; Mature: 15658
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLYRTQAIAQAGRNGEVHTLDNSLQLALALPTALGGNGKGNNPEQLLAAGYAACFSNA CCCHHHHHHHHHCCCCCCEEEECCCEEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHH LIHVAQKLGAPITSAPVTASVELLALADGRFNFAITLDVALAAAQPEQMAQAEQLVRLAH HHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHH QTCPFSNAIRGNVVTRLRLNDIELEEKQ HCCCCCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MKTLYRTQAIAQAGRNGEVHTLDNSLQLALALPTALGGNGKGNNPEQLLAAGYAACFSNA CCCHHHHHHHHHCCCCCCEEEECCCEEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHH LIHVAQKLGAPITSAPVTASVELLALADGRFNFAITLDVALAAAQPEQMAQAEQLVRLAH HHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHH QTCPFSNAIRGNVVTRLRLNDIELEEKQ HCCCCCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA