| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is ada [H]
Identifier: 145300151
GI number: 145300151
Start: 3519175
End: 3520743
Strand: Direct
Name: ada [H]
Synonym: ASA_3254
Alternate gene names: 145300151
Gene position: 3519175-3520743 (Clockwise)
Preceding gene: 145300149
Following gene: 145300152
Centisome position: 74.84
GC content: 65.84
Gene sequence:
>1569_bases ATGACCCCACAGCCCGTCAGTGACAACCCTCAGGATGAAGGGATCCCGAGCCTCAGCCGCGAACAGTGCCATGCAGCCCG CCTCGCCCGCGATGCGCGCTTCGATGGCCGTTTCTTTACCGGCGTGCTCTCCACCGGCATCTACTGCCGCCCCGTCTGCC CCGCTCGGCCACCGCACGAGCACAACGTGCGCTACTTCCGAAGCGCAGCCGCCGCCGAGCAGCATGGTCTGCGCCCATGT CTGCGCTGTCGCCCCGAGCTGGCCCCTTCCGCCAGCGGCGATCTGCCGCCCGGACTCGCCCGTTTGCTGGCGCGGATCGA ACGTGGCGAGCTGGCAGACACAACGCTCGCAATGCTCGCGCAGCAGGCCGGGATCACGGAGCGCACGCTGCGCCGCCAGT TCGAACAGCACCTTGGTGCCTCGCCAAAACAGGTGGAGCAGACGCGCCGCCTGCTGCTCGCGAAACGGCTGCTGACCGAA ACTGCACTGCCCATCACGGATATCGCATTTGCGGCAGGCTTTGCGAGCATCCGCCGCTTCAACGATGCCTGGAGCCAGGC GTATGGCCTCGCGCCCAGAGCCCTGCGACAACAGCAAGGGAATGAGGGGGCGGCGGAAGGTGGCGCTGCACTCACGCTGC AATTGCCGTATCGCCCGCCCTACGATGTGGCGGCCATGCTGGCGTTCTATCGGCTACGGGCCATCCCCGGGCTGGAGCGG GTTGATGGAAATGTGTATGAACGGCGCCACAGGGTCGGCGATCAGTCTGGATGGATCCGCATCGAGCAGGGCAAGGGCCA TAGCATCAGGCTCACAGTGCATGATCTGCCGCCCGCTGCACTGCCTGATCTCTTGTATCGCGTGCGCCGCATGTGGGATC TCGATGCCGACATGCAGCGCATCGGCGAGCGGCTCGGCCAGGATCCGCTGCTGGCCCGCTTGCAGTCACGCTGGCCCGGG GTGCGACTGCCCGCCGGTTGGGATGAGTACGAGGTGATGTTGCGCGCCATTGTTGGCCAGCAGGTATCGGTCAAGGGCGC CATCACCATCATGGGTCGGCTGCTGGCGCGTACCGAGGCGCAATTCGGCGTGGCCCAACTGCCCACACCAGCGCAGCTGT GTGCACTGGATCTCGACGGCATCGGCATGCCCGGCAGTCGCATCCGCACGCTGCAAGGGCTCGCCGCTGCGCTTGCAAGC GGTACGCTTTCCCTGAACACGGCCAGCGACGAACAATTATTGGCCTTGCCGGGCATAGGCCCCTGGACGGTCGCCTACTG GCGGCTACGCTGCGGGCAGGATCCGGACGCCTTCCCCGCCTCCGATCTGGTGCTGCAAAAGGCGCTGGGGGGCGGCGACA AGCTGCCAGTGAAGGAGGTGCTGGTACAAAGCGAAGCATGGCAACCCTGGCGCGGCTATGCCGCGAGCTGGCTGTGGCAC GCCATGAGCGAACAACCGGCACTGCTCATCAAGCAGCCATCGACCCCCACTGCGAGCCTGGTTTCACCCACAACGGGGAG CAATCCGCCCCAACGCTATGACGAGGAGATAACCCATGATCCGCTATGA
Upstream 100 bases:
>100_bases CCGACGACAATTTTATTTCAATTCCTGTCCGTTTCTGGCTAGTCACTGCGCCCACTCCCCCTTACTCTCAGCCATACACC CAATGCAGAGCTTGCATCCC
Downstream 100 bases:
>100_bases CGTGTTGCCAACAGACTGCGGCGAACTGCTGGTCGCCATCAACGCCCGCGGCCTGGTGCACGTGGACTTTGTGGCTGGCC TGCGGGCACTGCCCGATATG
Product: DNA methylation and regulatory protein
Products: NA
Alternate protein names: Regulatory protein of adaptative response; Methylated-DNA--protein-cysteine methyltransferase; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MTPQPVSDNPQDEGIPSLSREQCHAARLARDARFDGRFFTGVLSTGIYCRPVCPARPPHEHNVRYFRSAAAAEQHGLRPC LRCRPELAPSASGDLPPGLARLLARIERGELADTTLAMLAQQAGITERTLRRQFEQHLGASPKQVEQTRRLLLAKRLLTE TALPITDIAFAAGFASIRRFNDAWSQAYGLAPRALRQQQGNEGAAEGGAALTLQLPYRPPYDVAAMLAFYRLRAIPGLER VDGNVYERRHRVGDQSGWIRIEQGKGHSIRLTVHDLPPAALPDLLYRVRRMWDLDADMQRIGERLGQDPLLARLQSRWPG VRLPAGWDEYEVMLRAIVGQQVSVKGAITIMGRLLARTEAQFGVAQLPTPAQLCALDLDGIGMPGSRIRTLQGLAAALAS GTLSLNTASDEQLLALPGIGPWTVAYWRLRCGQDPDAFPASDLVLQKALGGGDKLPVKEVLVQSEAWQPWRGYAASWLWH AMSEQPALLIKQPSTPTASLVSPTTGSNPPQRYDEEITHDPL
Sequences:
>Translated_522_residues MTPQPVSDNPQDEGIPSLSREQCHAARLARDARFDGRFFTGVLSTGIYCRPVCPARPPHEHNVRYFRSAAAAEQHGLRPC LRCRPELAPSASGDLPPGLARLLARIERGELADTTLAMLAQQAGITERTLRRQFEQHLGASPKQVEQTRRLLLAKRLLTE TALPITDIAFAAGFASIRRFNDAWSQAYGLAPRALRQQQGNEGAAEGGAALTLQLPYRPPYDVAAMLAFYRLRAIPGLER VDGNVYERRHRVGDQSGWIRIEQGKGHSIRLTVHDLPPAALPDLLYRVRRMWDLDADMQRIGERLGQDPLLARLQSRWPG VRLPAGWDEYEVMLRAIVGQQVSVKGAITIMGRLLARTEAQFGVAQLPTPAQLCALDLDGIGMPGSRIRTLQGLAAALAS GTLSLNTASDEQLLALPGIGPWTVAYWRLRCGQDPDAFPASDLVLQKALGGGDKLPVKEVLVQSEAWQPWRGYAASWLWH AMSEQPALLIKQPSTPTASLVSPTTGSNPPQRYDEEITHDPL >Mature_521_residues TPQPVSDNPQDEGIPSLSREQCHAARLARDARFDGRFFTGVLSTGIYCRPVCPARPPHEHNVRYFRSAAAAEQHGLRPCL RCRPELAPSASGDLPPGLARLLARIERGELADTTLAMLAQQAGITERTLRRQFEQHLGASPKQVEQTRRLLLAKRLLTET ALPITDIAFAAGFASIRRFNDAWSQAYGLAPRALRQQQGNEGAAEGGAALTLQLPYRPPYDVAAMLAFYRLRAIPGLERV DGNVYERRHRVGDQSGWIRIEQGKGHSIRLTVHDLPPAALPDLLYRVRRMWDLDADMQRIGERLGQDPLLARLQSRWPGV RLPAGWDEYEVMLRAIVGQQVSVKGAITIMGRLLARTEAQFGVAQLPTPAQLCALDLDGIGMPGSRIRTLQGLAAALASG TLSLNTASDEQLLALPGIGPWTVAYWRLRCGQDPDAFPASDLVLQKALGGGDKLPVKEVLVQSEAWQPWRGYAASWLWHA MSEQPALLIKQPSTPTASLVSPTTGSNPPQRYDEEITHDPL
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus [H]
COG id: COG0122
COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788383, Length=290, Percent_Identity=32.7586206896552, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1788542, Length=174, Percent_Identity=32.7586206896552, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR010316 - InterPro: IPR011257 - InterPro: IPR003265 - InterPro: IPR003583 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR023170 - InterPro: IPR012294 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF06029 AlkA_N; PF00730 HhH-GPD [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 57413; Mature: 57282
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQPVSDNPQDEGIPSLSREQCHAARLARDARFDGRFFTGVLSTGIYCRPVCPARPPHE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCCC HNVRYFRSAAAAEQHGLRPCLRCRPELAPSASGDLPPGLARLLARIERGELADTTLAMLA CCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH QQAGITERTLRRQFEQHLGASPKQVEQTRRLLLAKRLLTETALPITDIAFAAGFASIRRF HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NDAWSQAYGLAPRALRQQQGNEGAAEGGAALTLQLPYRPPYDVAAMLAFYRLRAIPGLER HHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHH VDGNVYERRHRVGDQSGWIRIEQGKGHSIRLTVHDLPPAALPDLLYRVRRMWDLDADMQR HCCHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHH IGERLGQDPLLARLQSRWPGVRLPAGWDEYEVMLRAIVGQQVSVKGAITIMGRLLARTEA HHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH QFGVAQLPTPAQLCALDLDGIGMPGSRIRTLQGLAAALASGTLSLNTASDEQLLALPGIG HCCHHCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCC PWTVAYWRLRCGQDPDAFPASDLVLQKALGGGDKLPVKEVLVQSEAWQPWRGYAASWLWH HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH AMSEQPALLIKQPSTPTASLVSPTTGSNPPQRYDEEITHDPL HHCCCCEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure TPQPVSDNPQDEGIPSLSREQCHAARLARDARFDGRFFTGVLSTGIYCRPVCPARPPHE CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCCCCCCCC HNVRYFRSAAAAEQHGLRPCLRCRPELAPSASGDLPPGLARLLARIERGELADTTLAMLA CCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH QQAGITERTLRRQFEQHLGASPKQVEQTRRLLLAKRLLTETALPITDIAFAAGFASIRRF HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NDAWSQAYGLAPRALRQQQGNEGAAEGGAALTLQLPYRPPYDVAAMLAFYRLRAIPGLER HHHHHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCHHH VDGNVYERRHRVGDQSGWIRIEQGKGHSIRLTVHDLPPAALPDLLYRVRRMWDLDADMQR HCCHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHH IGERLGQDPLLARLQSRWPGVRLPAGWDEYEVMLRAIVGQQVSVKGAITIMGRLLARTEA HHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH QFGVAQLPTPAQLCALDLDGIGMPGSRIRTLQGLAAALASGTLSLNTASDEQLLALPGIG HCCHHCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCEEECCCCC PWTVAYWRLRCGQDPDAFPASDLVLQKALGGGDKLPVKEVLVQSEAWQPWRGYAASWLWH HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH AMSEQPALLIKQPSTPTASLVSPTTGSNPPQRYDEEITHDPL HHCCCCEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]