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The map label for this gene is yccA [H]

Identifier: 145299461

GI number: 145299461

Start: 2694164

End: 2694820

Strand: Direct

Name: yccA [H]

Synonym: ASA_2525

Alternate gene names: 145299461

Gene position: 2694164-2694820 (Clockwise)

Preceding gene: 145299459

Following gene: 145299462

Centisome position: 57.29

GC content: 58.75

Gene sequence:

>657_bases
ATGGATACCCGTTCTATCTATACCGGCACCCAGAGTGCCGCGCGTGATACCAATAAGGTGCTGCGCAACACCTATATGCT
GCTCTCCCTCACTCTTGGCTTCTCTGCCGTTGTGGCCGGGATCGCCACCGTGATGAACATGCCGCCCCTGCACTGGGCCG
TGTTCCTCATCGGTGTGTATGGCCTGATGTTCCTGACCCAGAAGAACCAGGACAATGGCATGGGCCTGGTGTTCACCTTC
GCCCTGACCGGCCTGCTCGGCTACAGCCTGGGCCCCATCATCAACATGTACATGAACAATGGTGGTGGCGAGATAGTGAT
GACGGCGCTCGGCGGCACAGCGTTGACCTTCTTCGGTCTATCCGCTTATGCCCTGACCACCAAGCGTGACCTTTCCTTTA
TCGGTGGCATGCTGTTCGTCGGTTTCTGGGTGCTGCTGGTGGCCATGGTCGCCAACATCTTCCTGCAGATGAGCGCCCTG
AGCCTGGCCCTGTCCGCCATGTTCATGCTGTTCTCCTCCGGCGCCATATTGCTGACCACCCAGCAGATCATCCGTGGCGG
CGAGACCAACTACATCTCCGCCACCGTGACCCTGTATGTCTCCATCTACAACATCTTCCTGAGCCTGCTGAGCCTGCTCG
GCGGCAACCGCAACTGA

Upstream 100 bases:

>100_bases
CGCTTGAAATCAGCGCTCGTCATCCCAACATTGAGTGCATACAATGCGATAACGAAGCGGAATGTACCGCCTCAACCCGG
AAATCAAGAGGACACCCAAG

Downstream 100 bases:

>100_bases
TGAAAGACCCCGCTTCGGCGGGGTTTTTATTGGTGCCTGTTTCTGTCAGGATAAGTTGTAAATCAAGGATATGAAGCTAA
GCGGCCCTGATCCAAATCAG

Product: SecY stabilizing membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MDTRSIYTGTQSAARDTNKVLRNTYMLLSLTLGFSAVVAGIATVMNMPPLHWAVFLIGVYGLMFLTQKNQDNGMGLVFTF
ALTGLLGYSLGPIINMYMNNGGGEIVMTALGGTALTFFGLSAYALTTKRDLSFIGGMLFVGFWVLLVAMVANIFLQMSAL
SLALSAMFMLFSSGAILLTTQQIIRGGETNYISATVTLYVSIYNIFLSLLSLLGGNRN

Sequences:

>Translated_218_residues
MDTRSIYTGTQSAARDTNKVLRNTYMLLSLTLGFSAVVAGIATVMNMPPLHWAVFLIGVYGLMFLTQKNQDNGMGLVFTF
ALTGLLGYSLGPIINMYMNNGGGEIVMTALGGTALTFFGLSAYALTTKRDLSFIGGMLFVGFWVLLVAMVANIFLQMSAL
SLALSAMFMLFSSGAILLTTQQIIRGGETNYISATVTLYVSIYNIFLSLLSLLGGNRN
>Mature_218_residues
MDTRSIYTGTQSAARDTNKVLRNTYMLLSLTLGFSAVVAGIATVMNMPPLHWAVFLIGVYGLMFLTQKNQDNGMGLVFTF
ALTGLLGYSLGPIINMYMNNGGGEIVMTALGGTALTFFGLSAYALTTKRDLSFIGGMLFVGFWVLLVAMVANIFLQMSAL
SLALSAMFMLFSSGAILLTTQQIIRGGETNYISATVTLYVSIYNIFLSLLSLLGGNRN

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=214, Percent_Identity=57.4766355140187, Blast_Score=233, Evalue=6e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 23474; Mature: 23474

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRSIYTGTQSAARDTNKVLRNTYMLLSLTLGFSAVVAGIATVMNMPPLHWAVFLIGVY
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GLMFLTQKNQDNGMGLVFTFALTGLLGYSLGPIINMYMNNGGGEIVMTALGGTALTFFGL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHH
SAYALTTKRDLSFIGGMLFVGFWVLLVAMVANIFLQMSALSLALSAMFMLFSSGAILLTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
QQIIRGGETNYISATVTLYVSIYNIFLSLLSLLGGNRN
HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDTRSIYTGTQSAARDTNKVLRNTYMLLSLTLGFSAVVAGIATVMNMPPLHWAVFLIGVY
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GLMFLTQKNQDNGMGLVFTFALTGLLGYSLGPIINMYMNNGGGEIVMTALGGTALTFFGL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCHHHHHHHH
SAYALTTKRDLSFIGGMLFVGFWVLLVAMVANIFLQMSALSLALSAMFMLFSSGAILLTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
QQIIRGGETNYISATVTLYVSIYNIFLSLLSLLGGNRN
HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]