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The map label for this gene is yccS [H]

Identifier: 145299462

GI number: 145299462

Start: 2694985

End: 2697138

Strand: Direct

Name: yccS [H]

Synonym: ASA_2526

Alternate gene names: 145299462

Gene position: 2694985-2697138 (Clockwise)

Preceding gene: 145299461

Following gene: 145299463

Centisome position: 57.31

GC content: 63.23

Gene sequence:

>2154_bases
ATGCCGATGGATTTCTCTGGCCTGCTGCGCCGACTGCTGACTGACAGTCACATCTACTTCGCCCTCAAGGTCTTGCTGGC
CATGGTGGGGCTGCTCGCCTTCACCCTGGCGACCGGCGATATCCAGCTCACTGTGTTGCTCTCCCTCGGGGTGGTGGCCG
GTGCCATCGCCGAAACCGACGACAGCCTGTGGGGCCGGGTCAAGAACCTTGCCATGACGCTGCTCTGCTTCCTGTTTGCC
TCCCTGTGTGTGCAGTACCTCTTCCCGACGCCCTGGCTGTTTGCCATCGGGCTGGCAGGGTCGACCTTCCTCTTCGTGAT
GGTGGGGGCGCTCGGTCAGCGCTACGCCACCATCAGCTTCGGCTCCCTGCTTATCGCCATCTACACCATGCTGGGGGCTG
CCAAGGCGCCGGATCTCTTCTACCAGCCGCTCGCATTGTGCGCCGGTGCACTCTGGTATGGTCTGGTCTCCCTCATTTGG
CTCTGGCTGCTGCCCTACAAGACACTGCACGAGCAACTTGCCCAGAGTTACTTTGCCCTCGGCCGCTATCTGCTGGAGAA
ATCTCGCTTTTTTCCAGCGGACGAGCATGGCGCCCAGGCCATTCGCCACAATCTGGCCCAGCTCAACATCAATCTGGTCA
ATGCGCTGACACTGACCAAATCGGCGCTCAACGCCCGCCTCAGCACCCGCCATCAGGCGGCGCCCGAGCTTGCCAGCCTG
CTGCGCCTCTACCTGCTGGCGCTGGAAATCCAGGAACGTGCCACCTCCAGCCACTATCCCTACAGCAGGCTGGAAGCCGA
GCTCAAGCAGGGTATCGTCCTTGACGGGTTTCAGGAGGTGTTTTTGCAGCTCTCCGAGGCGTGCCAGCGGCTCGGTTACG
CCATCCTGGTGCACAAGCCCTACGCCCACAACAAGCGCATCCACTGGACCCTGGAGGCTCTCGGCGATCAGCTGGAGTTC
ACCCACCTCAAGCAGCACTACCCCAAGACATTGCTGACGCCGATGAAGTTCCTGCGCCGCAATCTGGCCAGCGCCGAGGA
GCTGCTGGGCAGCGCCGAGGAGCTGCAAAATCCGACGCAGGCCCCACAGAGCTTGCCGCCTCTGGCGCGTCCTGTCCGCC
TGCCATTGCTGGCTCAGCTCAAGCAGCACCTCAGCCCGGACTCCATGGTGTTTCGCCATGCCCTGCGCCTGTCGCTCGGG
TTGGTGGTAGGTTACGGCATCTTGCAGACCTTCAACCTTGATAAGGGTTACTGGATCCTGCTGACGGTGCTGTTTGTCTG
CCAACCCAGCTACAGCGCCACCCGCCGCCGGCTGGTACAGCGGATGCTCGGTACCTTCGCCGGCCTGCTGGTGGGCGTCC
CCGTGCTCTGGCTGTTCCCCGAATTGCATGTTCAACTGGTGGTAATGGGGCTCGCCGCCTTCCTGTTCTTCACCCAGGTA
CGCAGCAACTACAGCGCCGCAGTCTGCTTCATCACCCTCTATGTACTGATGGCCTTCAACCTGCTGGACGGCATCGGCTT
TGCCATTCTGGGGCCGCGCCTGCTCGACACCTTCCTCGGCTGCCTGCTCTCCTACGCACTGGTGGCCTGGCTCTGGCCGG
ACTGGCAGTACAAACGGCTGCCGACGCTTATCGCCAACTCCCTGTCAGCCAACGCCCGCTACTTGGCGGCCGTGCTCGCC
AGCCTGCAACAGCAAAGGGATGAATCCATCGACTACCGGGTAGCCCGCAAGAGCGCCCATCTGGCCGACAGCGAGCTGGC
CATGGCCTGGCAGAGCATGCTGGTGGAGCCGCAAAAGCGCCGCCGCTTCCTCGATCTCTGCTTCACCCTCACCTGGCGCA
ACCACGCCCTGCTCTCCTACATCTCGGCGCTGGGTGCCCATCGCGACAAGCTGGAGGCCATCGGCGAACTCGACGAGATC
AGCCGCCACCTGAGCCACACCCTGGAGCGGGCCGCAGGCCATCTGGCGGGCGAGATACCTGCACAGATCGAAGGACAGTG
CCCCGTCATCACGCCGGACAGCAGCGAGGAGCAGCTGATGCTGACCCAGCAGCTCACCCTGATCAGCCAGCTGGCGGACG
AGTTGCTCACCCTGGCCAACGAGAGCCGGTTGCTCACCGGGGGCCAAGGCGCTACCATGCCCGCCCAATCCTGA

Upstream 100 bases:

>100_bases
AAGGATATGAAGCTAAGCGGCCCTGATCCAAATCAGGGCCGCTTCGCGCTTGGCGGGTTAGTATCCCGTTCTCGTTTCAT
TCAAGGGTTGCTCTTGTCTC

Downstream 100 bases:

>100_bases
TAGCCCTATTTGCGAGGAGCCCTCTTATGGCTGAGCATCAGCTGGAATTCAACGGCCAAACCATCGAAACCGATGCCAAG
GGCTATCTGCTGAACAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 717; Mature: 716

Protein sequence:

>717_residues
MPMDFSGLLRRLLTDSHIYFALKVLLAMVGLLAFTLATGDIQLTVLLSLGVVAGAIAETDDSLWGRVKNLAMTLLCFLFA
SLCVQYLFPTPWLFAIGLAGSTFLFVMVGALGQRYATISFGSLLIAIYTMLGAAKAPDLFYQPLALCAGALWYGLVSLIW
LWLLPYKTLHEQLAQSYFALGRYLLEKSRFFPADEHGAQAIRHNLAQLNINLVNALTLTKSALNARLSTRHQAAPELASL
LRLYLLALEIQERATSSHYPYSRLEAELKQGIVLDGFQEVFLQLSEACQRLGYAILVHKPYAHNKRIHWTLEALGDQLEF
THLKQHYPKTLLTPMKFLRRNLASAEELLGSAEELQNPTQAPQSLPPLARPVRLPLLAQLKQHLSPDSMVFRHALRLSLG
LVVGYGILQTFNLDKGYWILLTVLFVCQPSYSATRRRLVQRMLGTFAGLLVGVPVLWLFPELHVQLVVMGLAAFLFFTQV
RSNYSAAVCFITLYVLMAFNLLDGIGFAILGPRLLDTFLGCLLSYALVAWLWPDWQYKRLPTLIANSLSANARYLAAVLA
SLQQQRDESIDYRVARKSAHLADSELAMAWQSMLVEPQKRRRFLDLCFTLTWRNHALLSYISALGAHRDKLEAIGELDEI
SRHLSHTLERAAGHLAGEIPAQIEGQCPVITPDSSEEQLMLTQQLTLISQLADELLTLANESRLLTGGQGATMPAQS

Sequences:

>Translated_717_residues
MPMDFSGLLRRLLTDSHIYFALKVLLAMVGLLAFTLATGDIQLTVLLSLGVVAGAIAETDDSLWGRVKNLAMTLLCFLFA
SLCVQYLFPTPWLFAIGLAGSTFLFVMVGALGQRYATISFGSLLIAIYTMLGAAKAPDLFYQPLALCAGALWYGLVSLIW
LWLLPYKTLHEQLAQSYFALGRYLLEKSRFFPADEHGAQAIRHNLAQLNINLVNALTLTKSALNARLSTRHQAAPELASL
LRLYLLALEIQERATSSHYPYSRLEAELKQGIVLDGFQEVFLQLSEACQRLGYAILVHKPYAHNKRIHWTLEALGDQLEF
THLKQHYPKTLLTPMKFLRRNLASAEELLGSAEELQNPTQAPQSLPPLARPVRLPLLAQLKQHLSPDSMVFRHALRLSLG
LVVGYGILQTFNLDKGYWILLTVLFVCQPSYSATRRRLVQRMLGTFAGLLVGVPVLWLFPELHVQLVVMGLAAFLFFTQV
RSNYSAAVCFITLYVLMAFNLLDGIGFAILGPRLLDTFLGCLLSYALVAWLWPDWQYKRLPTLIANSLSANARYLAAVLA
SLQQQRDESIDYRVARKSAHLADSELAMAWQSMLVEPQKRRRFLDLCFTLTWRNHALLSYISALGAHRDKLEAIGELDEI
SRHLSHTLERAAGHLAGEIPAQIEGQCPVITPDSSEEQLMLTQQLTLISQLADELLTLANESRLLTGGQGATMPAQS
>Mature_716_residues
PMDFSGLLRRLLTDSHIYFALKVLLAMVGLLAFTLATGDIQLTVLLSLGVVAGAIAETDDSLWGRVKNLAMTLLCFLFAS
LCVQYLFPTPWLFAIGLAGSTFLFVMVGALGQRYATISFGSLLIAIYTMLGAAKAPDLFYQPLALCAGALWYGLVSLIWL
WLLPYKTLHEQLAQSYFALGRYLLEKSRFFPADEHGAQAIRHNLAQLNINLVNALTLTKSALNARLSTRHQAAPELASLL
RLYLLALEIQERATSSHYPYSRLEAELKQGIVLDGFQEVFLQLSEACQRLGYAILVHKPYAHNKRIHWTLEALGDQLEFT
HLKQHYPKTLLTPMKFLRRNLASAEELLGSAEELQNPTQAPQSLPPLARPVRLPLLAQLKQHLSPDSMVFRHALRLSLGL
VVGYGILQTFNLDKGYWILLTVLFVCQPSYSATRRRLVQRMLGTFAGLLVGVPVLWLFPELHVQLVVMGLAAFLFFTQVR
SNYSAAVCFITLYVLMAFNLLDGIGFAILGPRLLDTFLGCLLSYALVAWLWPDWQYKRLPTLIANSLSANARYLAAVLAS
LQQQRDESIDYRVARKSAHLADSELAMAWQSMLVEPQKRRRFLDLCFTLTWRNHALLSYISALGAHRDKLEAIGELDEIS
RHLSHTLERAAGHLAGEIPAQIEGQCPVITPDSSEEQLMLTQQLTLISQLADELLTLANESRLLTGGQGATMPAQS

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=706, Percent_Identity=39.8016997167139, Blast_Score=455, Evalue=1e-129,
Organism=Escherichia coli, GI87082248, Length=539, Percent_Identity=29.1280148423006, Blast_Score=145, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010019
- InterPro:   IPR010020 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79986; Mature: 79855

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMDFSGLLRRLLTDSHIYFALKVLLAMVGLLAFTLATGDIQLTVLLSLGVVAGAIAETD
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
DSLWGRVKNLAMTLLCFLFASLCVQYLFPTPWLFAIGLAGSTFLFVMVGALGQRYATISF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHH
GSLLIAIYTMLGAAKAPDLFYQPLALCAGALWYGLVSLIWLWLLPYKTLHEQLAQSYFAL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GRYLLEKSRFFPADEHGAQAIRHNLAQLNINLVNALTLTKSALNARLSTRHQAAPELASL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LRLYLLALEIQERATSSHYPYSRLEAELKQGIVLDGFQEVFLQLSEACQRLGYAILVHKP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEECC
YAHNKRIHWTLEALGDQLEFTHLKQHYPKTLLTPMKFLRRNLASAEELLGSAEELQNPTQ
CCCCCCEEEEHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
APQSLPPLARPVRLPLLAQLKQHLSPDSMVFRHALRLSLGLVVGYGILQTFNLDKGYWIL
CCCCCCCCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LTVLFVCQPSYSATRRRLVQRMLGTFAGLLVGVPVLWLFPELHVQLVVMGLAAFLFFTQV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSNYSAAVCFITLYVLMAFNLLDGIGFAILGPRLLDTFLGCLLSYALVAWLWPDWQYKRL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
PTLIANSLSANARYLAAVLASLQQQRDESIDYRVARKSAHLADSELAMAWQSMLVEPQKR
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHH
RRFLDLCFTLTWRNHALLSYISALGAHRDKLEAIGELDEISRHLSHTLERAAGHLAGEIP
HHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
AQIEGQCPVITPDSSEEQLMLTQQLTLISQLADELLTLANESRLLTGGQGATMPAQS
CCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
PMDFSGLLRRLLTDSHIYFALKVLLAMVGLLAFTLATGDIQLTVLLSLGVVAGAIAETD
CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
DSLWGRVKNLAMTLLCFLFASLCVQYLFPTPWLFAIGLAGSTFLFVMVGALGQRYATISF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHH
GSLLIAIYTMLGAAKAPDLFYQPLALCAGALWYGLVSLIWLWLLPYKTLHEQLAQSYFAL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
GRYLLEKSRFFPADEHGAQAIRHNLAQLNINLVNALTLTKSALNARLSTRHQAAPELASL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LRLYLLALEIQERATSSHYPYSRLEAELKQGIVLDGFQEVFLQLSEACQRLGYAILVHKP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEEECC
YAHNKRIHWTLEALGDQLEFTHLKQHYPKTLLTPMKFLRRNLASAEELLGSAEELQNPTQ
CCCCCCEEEEHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC
APQSLPPLARPVRLPLLAQLKQHLSPDSMVFRHALRLSLGLVVGYGILQTFNLDKGYWIL
CCCCCCCCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LTVLFVCQPSYSATRRRLVQRMLGTFAGLLVGVPVLWLFPELHVQLVVMGLAAFLFFTQV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSNYSAAVCFITLYVLMAFNLLDGIGFAILGPRLLDTFLGCLLSYALVAWLWPDWQYKRL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
PTLIANSLSANARYLAAVLASLQQQRDESIDYRVARKSAHLADSELAMAWQSMLVEPQKR
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHH
RRFLDLCFTLTWRNHALLSYISALGAHRDKLEAIGELDEISRHLSHTLERAAGHLAGEIP
HHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCC
AQIEGQCPVITPDSSEEQLMLTQQLTLISQLADELLTLANESRLLTGGQGATMPAQS
CCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]