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The map label for this gene is araA [H]

Identifier: 145299352

GI number: 145299352

Start: 2559910

End: 2561409

Strand: Direct

Name: araA [H]

Synonym: ASA_2399

Alternate gene names: 145299352

Gene position: 2559910-2561409 (Clockwise)

Preceding gene: 145299351

Following gene: 145299354

Centisome position: 54.44

GC content: 62.8

Gene sequence:

>1500_bases
ATGGAGTTTATGAAACAGCTGGAAGTGTGGTTTCTGGTCGGCAGCCAGCACCTGTATAGCGCAACCACATTGAAGCAGGT
CGCCGATCACGCCCATACCATGACCAGCCAGCTCAACGAGGGGGCCGGGCTGCCCATCAAGATAGTGCTCAAGCCCACCG
GCACCACCCTCGATGAAATAAGCAGCGTCGCTCGCGATGCCAACCACAGCGAGCAGTGCGTCGGGCTCATGGTGTGGATG
CACACCTTCTCCCCCGCCAAGATGTGGATCCCGGCCCTGAGTCAGCTGCAAAAGCCTCTGCTGCAATTTCACACCCAGTT
CAACCGGGATCTGCCCTGGAGCGAGATCGACATGGACTTCATGAACCTGAACCAGACCGCCCACGGCGGGCGCGAGTTCG
GTTTCATGGGGGCCCGGCTGCGGCTGCCACGCACAGTGGTGGTCGGCCACTGGCAGGATGAGGAAGCCTGGAGCAAGATC
GGCAACTGGATGCGCATCGCCGCCGCCATTCACGACAGCCGCCACCTGAAGATCGCCCGCTTTGGCGACAACATGCGTAA
CGTGGCCGTCACCGAAGGCGACAAGATTGAAGCCCAGATCCAGTTCGGCTATCAGGTGAACTATCACCCGGTCGGCGATC
TGGTGAAGATCATCGATGCCGTGCCCGCCGCCGATATCGAGGCGCTGCTGGCCGAGTACGAACAGAGCTATACCCTGACC
GAGGCGGTGCAGGCAGGTGGGCCGCTGCGCGCATCGCTCTACGAGGCGGCGCGCCAGGAGTTGGGGATGAAGAAATTCCT
CACCGAGGGCGGTTTTGGCGCCTTCACCACCACCTTCGAGGATCTCCATGGCCTGCACCAGCTGCCGGGGCTGGCCTGCC
AGCGCCTGATGCAGCAAGGCTTCGGCTTCGGGGCCGAAGGGGACTGGAAGACCGCGGCCCTGCTGCGCACCATCAAGGTG
ATGGGGACAGGCCTTGCGGGTGGCACCTCTTTCATGGAGGACTACACCTACCACCTGGAGGCGGGCAATAATCTGGTACT
GGGATCCCACATGCTGGAGGTCTGCCCCTCCATCGCCGCCGACAAACCCGTGCTGGATGCCCAGCATCTGGGGATCGGCA
AGAAGGCCGACCCTGCCCGTCTGCTGTTCGCTGCACCAGCCGGCAAGGCGGTCAACGCCAGCCTCATCGACATGGGCAAT
CGCTTCCGGCTGGTGGTCAATCAGCTGGAGGTGGTGGACTTGCCAGAGGCCATGCCGAAATTGCCGGTGGCGAGCGCCCT
GTGGAAGCCCCTGCCGAGCCTTCAGACCAGCGCCGAGGCCTGGATCCTGGCGGGCGCCGCCCACCACTCGGTGTTCACCC
AGTCGGTAGACATAGAGCAGCTGCGCACCTTCGCCGACATCATGGGCATAGAGTTCGTGGTGATTGACGAGCACACCCGC
ATCCCCGCGCTCAAGGAGACCCTGCGCTGGAACGAGGTCTACTACAAGATCTGCCACTGA

Upstream 100 bases:

>100_bases
CCCTGCCAGACTACCTGCTGGAGAAACACTACCAGCGCAAACATGGCAAGCACGCCTATTACGGCCAGACCGAGACTTAA
TCAATCAAGAGGACAAGATC

Downstream 100 bases:

>100_bases
TCCCTTAATCGGCCAGCGGCCACCAGCATGACAGCAGCCCCGCCAGCGGGGCTGTTGCTTTTTTGATGGGGCAGACAGAT
GTCACCCTGTCAGGGAAGGA

Product: L-arabinose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MEFMKQLEVWFLVGSQHLYSATTLKQVADHAHTMTSQLNEGAGLPIKIVLKPTGTTLDEISSVARDANHSEQCVGLMVWM
HTFSPAKMWIPALSQLQKPLLQFHTQFNRDLPWSEIDMDFMNLNQTAHGGREFGFMGARLRLPRTVVVGHWQDEEAWSKI
GNWMRIAAAIHDSRHLKIARFGDNMRNVAVTEGDKIEAQIQFGYQVNYHPVGDLVKIIDAVPAADIEALLAEYEQSYTLT
EAVQAGGPLRASLYEAARQELGMKKFLTEGGFGAFTTTFEDLHGLHQLPGLACQRLMQQGFGFGAEGDWKTAALLRTIKV
MGTGLAGGTSFMEDYTYHLEAGNNLVLGSHMLEVCPSIAADKPVLDAQHLGIGKKADPARLLFAAPAGKAVNASLIDMGN
RFRLVVNQLEVVDLPEAMPKLPVASALWKPLPSLQTSAEAWILAGAAHHSVFTQSVDIEQLRTFADIMGIEFVVIDEHTR
IPALKETLRWNEVYYKICH

Sequences:

>Translated_499_residues
MEFMKQLEVWFLVGSQHLYSATTLKQVADHAHTMTSQLNEGAGLPIKIVLKPTGTTLDEISSVARDANHSEQCVGLMVWM
HTFSPAKMWIPALSQLQKPLLQFHTQFNRDLPWSEIDMDFMNLNQTAHGGREFGFMGARLRLPRTVVVGHWQDEEAWSKI
GNWMRIAAAIHDSRHLKIARFGDNMRNVAVTEGDKIEAQIQFGYQVNYHPVGDLVKIIDAVPAADIEALLAEYEQSYTLT
EAVQAGGPLRASLYEAARQELGMKKFLTEGGFGAFTTTFEDLHGLHQLPGLACQRLMQQGFGFGAEGDWKTAALLRTIKV
MGTGLAGGTSFMEDYTYHLEAGNNLVLGSHMLEVCPSIAADKPVLDAQHLGIGKKADPARLLFAAPAGKAVNASLIDMGN
RFRLVVNQLEVVDLPEAMPKLPVASALWKPLPSLQTSAEAWILAGAAHHSVFTQSVDIEQLRTFADIMGIEFVVIDEHTR
IPALKETLRWNEVYYKICH
>Mature_499_residues
MEFMKQLEVWFLVGSQHLYSATTLKQVADHAHTMTSQLNEGAGLPIKIVLKPTGTTLDEISSVARDANHSEQCVGLMVWM
HTFSPAKMWIPALSQLQKPLLQFHTQFNRDLPWSEIDMDFMNLNQTAHGGREFGFMGARLRLPRTVVVGHWQDEEAWSKI
GNWMRIAAAIHDSRHLKIARFGDNMRNVAVTEGDKIEAQIQFGYQVNYHPVGDLVKIIDAVPAADIEALLAEYEQSYTLT
EAVQAGGPLRASLYEAARQELGMKKFLTEGGFGAFTTTFEDLHGLHQLPGLACQRLMQQGFGFGAEGDWKTAALLRTIKV
MGTGLAGGTSFMEDYTYHLEAGNNLVLGSHMLEVCPSIAADKPVLDAQHLGIGKKADPARLLFAAPAGKAVNASLIDMGN
RFRLVVNQLEVVDLPEAMPKLPVASALWKPLPSLQTSAEAWILAGAAHHSVFTQSVDIEQLRTFADIMGIEFVVIDEHTR
IPALKETLRWNEVYYKICH

Specific function: Catalyzes the conversion of L-arabinose to L-ribulose [H]

COG id: COG2160

COG function: function code G; L-arabinose isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arabinose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI1786248, Length=496, Percent_Identity=63.9112903225806, Blast_Score=683, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004216
- InterPro:   IPR009015
- InterPro:   IPR003762
- ProDom:   PD018364 [H]

Pfam domain/function: PF02610 Arabinose_Isome [H]

EC number: =5.3.1.4 [H]

Molecular weight: Translated: 55297; Mature: 55297

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFMKQLEVWFLVGSQHLYSATTLKQVADHAHTMTSQLNEGAGLPIKIVLKPTGTTLDEI
CCHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHH
SSVARDANHSEQCVGLMVWMHTFSPAKMWIPALSQLQKPLLQFHTQFNRDLPWSEIDMDF
HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHH
MNLNQTAHGGREFGFMGARLRLPRTVVVGHWQDEEAWSKIGNWMRIAAAIHDSRHLKIAR
HHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
FGDNMRNVAVTEGDKIEAQIQFGYQVNYHPVGDLVKIIDAVPAADIEALLAEYEQSYTLT
CCCCCCEEEEECCCEEEEEEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH
EAVQAGGPLRASLYEAARQELGMKKFLTEGGFGAFTTTFEDLHGLHQLPGLACQRLMQQG
HHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHC
FGFGAEGDWKTAALLRTIKVMGTGLAGGTSFMEDYTYHLEAGNNLVLGSHMLEVCPSIAA
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCEEEEHHHHHHHCHHHCC
DKPVLDAQHLGIGKKADPARLLFAAPAGKAVNASLIDMGNRFRLVVNQLEVVDLPEAMPK
CCCCCCHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCEEEHHHHHHHEECHHHHCC
LPVASALWKPLPSLQTSAEAWILAGAAHHSVFTQSVDIEQLRTFADIMGIEFVVIDEHTR
CCHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCC
IPALKETLRWNEVYYKICH
CHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MEFMKQLEVWFLVGSQHLYSATTLKQVADHAHTMTSQLNEGAGLPIKIVLKPTGTTLDEI
CCHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHH
SSVARDANHSEQCVGLMVWMHTFSPAKMWIPALSQLQKPLLQFHTQFNRDLPWSEIDMDF
HHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHH
MNLNQTAHGGREFGFMGARLRLPRTVVVGHWQDEEAWSKIGNWMRIAAAIHDSRHLKIAR
HHCCCCCCCCCCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE
FGDNMRNVAVTEGDKIEAQIQFGYQVNYHPVGDLVKIIDAVPAADIEALLAEYEQSYTLT
CCCCCCEEEEECCCEEEEEEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH
EAVQAGGPLRASLYEAARQELGMKKFLTEGGFGAFTTTFEDLHGLHQLPGLACQRLMQQG
HHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHC
FGFGAEGDWKTAALLRTIKVMGTGLAGGTSFMEDYTYHLEAGNNLVLGSHMLEVCPSIAA
CCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEECCCEEEEHHHHHHHCHHHCC
DKPVLDAQHLGIGKKADPARLLFAAPAGKAVNASLIDMGNRFRLVVNQLEVVDLPEAMPK
CCCCCCHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCEEEHHHHHHHEECHHHHCC
LPVASALWKPLPSLQTSAEAWILAGAAHHSVFTQSVDIEQLRTFADIMGIEFVVIDEHTR
CCHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCC
IPALKETLRWNEVYYKICH
CHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA