| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is yeaH [C]
Identifier: 145299256
GI number: 145299256
Start: 2433107
End: 2434378
Strand: Direct
Name: yeaH [C]
Synonym: ASA_2299
Alternate gene names: 145299256
Gene position: 2433107-2434378 (Clockwise)
Preceding gene: 145299255
Following gene: 145299257
Centisome position: 51.74
GC content: 55.9
Gene sequence:
>1272_bases ATGGCGCATTTTATCGACCGCAGGCTCAACGGCAAAAACAAAAGCGCTGTCAATCGGCAGCGCTTCATCCGCCGCTACAA GAAGCAAATAAAACAAGCGGTCTCGGATGCTGTCTCCAAGCGCAGCATTCAGGACGTGGACAAGGGCGAGAGCATCAGCA TACCGACCAAGGATATAGGCGAACCCCATTTCCATCAGGGGCAAGGCGGTAAGCGGGAAATGGTGCATCCCGGCAATGAC CAGTTCGTCTCCGGTGACAAGATTGACCGCCCCAAAGGAGGGGGCGGTGGTCAGGGTGCGGGCGAAGGTCAGGCATCCAA TCAGGGGGAAGGCGAAGATGACTTCGTGTTCCAGATTTCCAAAGATGAGTATCTGGATCTGCTGTTTGAAGATCTGGAGC TGCCTCGCTTGCAGAAAACCCAGCTCAACCAGTTAATGGAGATGAAGACCTACCGGGCGGGTTACACCTCCAACGGGGTG CCAGCCAATATCAACGTGGTGCGTTCTCTGCAAAATTCGCTGGCGCGGCGCATGGCGCTGCAAGCCGGCAAGAAACGCCA GTTGCATGAATTGGAAGAGAGGATGGCCCTGCTGGCAACCGATCCCAACGAGCATTTCGCCGAAATTGCCCTGCTTGAGA AGGAGATCCGAGAGCTGAAACGGCGGATCTCAGCTGTGCCCTTCATCGACACCTTCGATCTCAAGTTCAACAACTTTGTC AAACTGCCCGTGCCTTCCAGCCAGGCTGTGATGTTCTGCCTGATGGACGTGTCGGGTTCCATGGATCAGGCCACCAAGGA GATGGCAAAGCGCTTCTATATCCTGCTCTACCTGTTCCTGAGCCGGACCTACAAGAACGTGGAAGTCGTCTACATTCGCC ATCACACCCAGGCCAAGGAAGTGGACGAACACGAGTTCTTCTATTCCCAGGAGACGGGCGGCACCATAGTCTCCAGCGCA CTCAAGATGATGAACGACATCATCAACGAGCGTTACCCGGCCAACCAGTGGAACATCTATGCGGCGCAAGCGTCCGATGG TGACAACTGGGCTGATGATTCGCCGCAATGCCGGGAGACCCTGACCCGGGATATCATGCCGCGGGTACGGTACTACTCCT ATATAGAGATCACCACCCGCGCCCACCAAACCCTGTGGCACGAGTACGAGTCGGTGGCCAGCCAGTTCCCCCACTTCGCG ATGGAGCACATTCGCAAGGTCGAGGATATTTATCCGGTATTCCGGGAGCTGTTCAAGAAGCAAGCGGCGTGA
Upstream 100 bases:
>100_bases ATGGAGAAAGGCTACACCCGGAAACAGGTGCGACTGCTCTCCGAATGGTATCTCAGGGTACGCAAGTCATCCTGACCCTG CCGTGGTTCAAGGGGGAGTT
Downstream 100 bases:
>100_bases GGGAGGTCATATGGTAGAAACCGCAAGAAAAATACCGCCACTGGACGATGGCCCGGATTGGAACTTCGATCTGCTGGAGA CTTATCATCAGGAGATAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MAHFIDRRLNGKNKSAVNRQRFIRRYKKQIKQAVSDAVSKRSIQDVDKGESISIPTKDIGEPHFHQGQGGKREMVHPGND QFVSGDKIDRPKGGGGGQGAGEGQASNQGEGEDDFVFQISKDEYLDLLFEDLELPRLQKTQLNQLMEMKTYRAGYTSNGV PANINVVRSLQNSLARRMALQAGKKRQLHELEERMALLATDPNEHFAEIALLEKEIRELKRRISAVPFIDTFDLKFNNFV KLPVPSSQAVMFCLMDVSGSMDQATKEMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSA LKMMNDIINERYPANQWNIYAAQASDGDNWADDSPQCRETLTRDIMPRVRYYSYIEITTRAHQTLWHEYESVASQFPHFA MEHIRKVEDIYPVFRELFKKQAA
Sequences:
>Translated_423_residues MAHFIDRRLNGKNKSAVNRQRFIRRYKKQIKQAVSDAVSKRSIQDVDKGESISIPTKDIGEPHFHQGQGGKREMVHPGND QFVSGDKIDRPKGGGGGQGAGEGQASNQGEGEDDFVFQISKDEYLDLLFEDLELPRLQKTQLNQLMEMKTYRAGYTSNGV PANINVVRSLQNSLARRMALQAGKKRQLHELEERMALLATDPNEHFAEIALLEKEIRELKRRISAVPFIDTFDLKFNNFV KLPVPSSQAVMFCLMDVSGSMDQATKEMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSA LKMMNDIINERYPANQWNIYAAQASDGDNWADDSPQCRETLTRDIMPRVRYYSYIEITTRAHQTLWHEYESVASQFPHFA MEHIRKVEDIYPVFRELFKKQAA >Mature_422_residues AHFIDRRLNGKNKSAVNRQRFIRRYKKQIKQAVSDAVSKRSIQDVDKGESISIPTKDIGEPHFHQGQGGKREMVHPGNDQ FVSGDKIDRPKGGGGGQGAGEGQASNQGEGEDDFVFQISKDEYLDLLFEDLELPRLQKTQLNQLMEMKTYRAGYTSNGVP ANINVVRSLQNSLARRMALQAGKKRQLHELEERMALLATDPNEHFAEIALLEKEIRELKRRISAVPFIDTFDLKFNNFVK LPVPSSQAVMFCLMDVSGSMDQATKEMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSAL KMMNDIINERYPANQWNIYAAQASDGDNWADDSPQCRETLTRDIMPRVRYYSYIEITTRAHQTLWHEYESVASQFPHFAM EHIRKVEDIYPVFRELFKKQAA
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family [H]
Homologues:
Organism=Escherichia coli, GI1788084, Length=423, Percent_Identity=72.5768321513002, Blast_Score=624, Evalue=1e-180,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006698 [H]
Pfam domain/function: PF04285 DUF444 [H]
EC number: NA
Molecular weight: Translated: 48702; Mature: 48571
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHFIDRRLNGKNKSAVNRQRFIRRYKKQIKQAVSDAVSKRSIQDVDKGESISIPTKDIG CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHCC EPHFHQGQGGKREMVHPGNDQFVSGDKIDRPKGGGGGQGAGEGQASNQGEGEDDFVFQIS CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC KDEYLDLLFEDLELPRLQKTQLNQLMEMKTYRAGYTSNGVPANINVVRSLQNSLARRMAL CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH QAGKKRQLHELEERMALLATDPNEHFAEIALLEKEIRELKRRISAVPFIDTFDLKFNNFV HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEE KLPVPSSQAVMFCLMDVSGSMDQATKEMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKE ECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHH VDEHEFFYSQETGGTIVSSALKMMNDIINERYPANQWNIYAAQASDGDNWADDSPQCRET CCHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH LTRDIMPRVRYYSYIEITTRAHQTLWHEYESVASQFPHFAMEHIRKVEDIYPVFRELFKK HHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH QAA HCC >Mature Secondary Structure AHFIDRRLNGKNKSAVNRQRFIRRYKKQIKQAVSDAVSKRSIQDVDKGESISIPTKDIG CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHCC EPHFHQGQGGKREMVHPGNDQFVSGDKIDRPKGGGGGQGAGEGQASNQGEGEDDFVFQIS CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC KDEYLDLLFEDLELPRLQKTQLNQLMEMKTYRAGYTSNGVPANINVVRSLQNSLARRMAL CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH QAGKKRQLHELEERMALLATDPNEHFAEIALLEKEIRELKRRISAVPFIDTFDLKFNNFV HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEE KLPVPSSQAVMFCLMDVSGSMDQATKEMAKRFYILLYLFLSRTYKNVEVVYIRHHTQAKE ECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHH VDEHEFFYSQETGGTIVSSALKMMNDIINERYPANQWNIYAAQASDGDNWADDSPQCRET CCHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH LTRDIMPRVRYYSYIEITTRAHQTLWHEYESVASQFPHFAMEHIRKVEDIYPVFRELFKK HHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH QAA HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]