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The map label for this gene is ycgB [H]

Identifier: 145299257

GI number: 145299257

Start: 2434389

End: 2435906

Strand: Direct

Name: ycgB [H]

Synonym: ASA_2300

Alternate gene names: 145299257

Gene position: 2434389-2435906 (Clockwise)

Preceding gene: 145299256

Following gene: 145299259

Centisome position: 51.77

GC content: 53.49

Gene sequence:

>1518_bases
ATGGTAGAAACCGCAAGAAAAATACCGCCACTGGACGATGGCCCGGATTGGAACTTCGATCTGCTGGAGACTTATCATCA
GGAGATAGCCCGGGTCGCCAGGTTTTATCGACTGGATACCTACCCCAATCAGATCGAGGTGATCACCGCCGAGCAGATGA
TGGATGCCTACTCCAGTGTCGGTATGCCCATCGGCTATCAACACTGGTCATTTGGCAAACGCTTCATCCACACCGAGCGC
AACTACAAACGCGGCCAGATGGGACTGGCCTATGAGATCGTCATCAACTCGGACCCCTGCATCGCTTACCTGATGGAAGA
GAACACGATGCCGATGCAGGCGCTGGTAATGGCGCACGCCTGTTATGGTCACAACTCTTTTTTCAAAAACAACTATCTGT
TCAAAACCTGGACCGATGCCTCCTCCATCATCGACTATCTGCTGTTTGCCAAGAACTACATCACAGAGTGCGAAGAGAAA
CACGGCATCGATGCGGTGGAAAAGTTGATCGACTCTTGTCATGCCCTGATGAACTTCGGAGTGGACCGTTACAAGCGGCC
CCAGAAGATCTCGCTGGCAGAGGAGAAGCGCCGCCAGAAGGCACGGGAAGATTATCTGCAGACTCAGGTGAACGAGCTGT
GGCGCACCCTGCCCAAGCAGCACAAAGCCTCCGGTGTTGAAGACAGACGCTACCCGGCCGAGCCCCAGGAGAACATTCTC
TACTTCATCGAGAAGAATGCCCCTCTGCTCGAACCCTGGCAGCGCGAGATAGTGCGTATAGTGCGCAAGATCAGCCAGTA
CTTCTACCCGCAGAAACAGACTCAGGTGATGAATGAAGGCTGGGCCACCTTCTGGCACTACACCATCCTTAACCACCTGT
ATGACGAGGGCAAGATCAGCGATCGCTTCATGATAGAGGTGCTGCACAGCCACACCAACGTGGTATACCAGCCCCCCTAC
AACAGCCGCTACTACTCGGGGATCAACCCCTACGCCCTTGGCTTTGCCATGTTCACTGATCTGCGCCGCATCTGCGAAAA
CCCGACCGAGGAGGACAGATACTGGTTCCCCGATTATGCCGGCACCAACTGGGTCGATACCCTGCATTTTGCCATGCAGA
ACTTCAAGGACGAGAGCTTCATCAGTCAGTTCCTGAGTCCCAAGGTGATGCGGGAAATGAAGCTGTTTGCCATCGACGAT
GATGACTTGAAGAACTATCTCAAGGTATCTGCCATTCACAATGAGGAGGGTTATCGGCTTGTACGCAATACCCTGTCAGC
TCAATACAACTTGAGCAACCTGGAGCCCAATATTCAGGTCTATAACGTAGCGGTGAAGGGAGATCGCTCATTGACCCTGC
GCTATGTGCCGCACAACCGGATCCCTCTTGGTGATTCACGCCACGAGGTGCTCAAGCATCTGCACCAGCTGTGGGGATTT
GATGTGGTACTGGAGCAGGATAACGGCGACTTGCCTGCCGACATTATCGGTCGCTGTCCTGATAAAAAACCGCTCTGA

Upstream 100 bases:

>100_bases
CAGTTCCCCCACTTCGCGATGGAGCACATTCGCAAGGTCGAGGATATTTATCCGGTATTCCGGGAGCTGTTCAAGAAGCA
AGCGGCGTGAGGGAGGTCAT

Downstream 100 bases:

>100_bases
GGCCACTTTCCACCATAAAAAAACGCGCCATCTGGCGCGTTTTTTTATGCATCAACAATCAGTTGTCACACAGATTGCTC
GGCATATCCTGACGCAACGG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MVETARKIPPLDDGPDWNFDLLETYHQEIARVARFYRLDTYPNQIEVITAEQMMDAYSSVGMPIGYQHWSFGKRFIHTER
NYKRGQMGLAYEIVINSDPCIAYLMEENTMPMQALVMAHACYGHNSFFKNNYLFKTWTDASSIIDYLLFAKNYITECEEK
HGIDAVEKLIDSCHALMNFGVDRYKRPQKISLAEEKRRQKAREDYLQTQVNELWRTLPKQHKASGVEDRRYPAEPQENIL
YFIEKNAPLLEPWQREIVRIVRKISQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKISDRFMIEVLHSHTNVVYQPPY
NSRYYSGINPYALGFAMFTDLRRICENPTEEDRYWFPDYAGTNWVDTLHFAMQNFKDESFISQFLSPKVMREMKLFAIDD
DDLKNYLKVSAIHNEEGYRLVRNTLSAQYNLSNLEPNIQVYNVAVKGDRSLTLRYVPHNRIPLGDSRHEVLKHLHQLWGF
DVVLEQDNGDLPADIIGRCPDKKPL

Sequences:

>Translated_505_residues
MVETARKIPPLDDGPDWNFDLLETYHQEIARVARFYRLDTYPNQIEVITAEQMMDAYSSVGMPIGYQHWSFGKRFIHTER
NYKRGQMGLAYEIVINSDPCIAYLMEENTMPMQALVMAHACYGHNSFFKNNYLFKTWTDASSIIDYLLFAKNYITECEEK
HGIDAVEKLIDSCHALMNFGVDRYKRPQKISLAEEKRRQKAREDYLQTQVNELWRTLPKQHKASGVEDRRYPAEPQENIL
YFIEKNAPLLEPWQREIVRIVRKISQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKISDRFMIEVLHSHTNVVYQPPY
NSRYYSGINPYALGFAMFTDLRRICENPTEEDRYWFPDYAGTNWVDTLHFAMQNFKDESFISQFLSPKVMREMKLFAIDD
DDLKNYLKVSAIHNEEGYRLVRNTLSAQYNLSNLEPNIQVYNVAVKGDRSLTLRYVPHNRIPLGDSRHEVLKHLHQLWGF
DVVLEQDNGDLPADIIGRCPDKKPL
>Mature_505_residues
MVETARKIPPLDDGPDWNFDLLETYHQEIARVARFYRLDTYPNQIEVITAEQMMDAYSSVGMPIGYQHWSFGKRFIHTER
NYKRGQMGLAYEIVINSDPCIAYLMEENTMPMQALVMAHACYGHNSFFKNNYLFKTWTDASSIIDYLLFAKNYITECEEK
HGIDAVEKLIDSCHALMNFGVDRYKRPQKISLAEEKRRQKAREDYLQTQVNELWRTLPKQHKASGVEDRRYPAEPQENIL
YFIEKNAPLLEPWQREIVRIVRKISQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKISDRFMIEVLHSHTNVVYQPPY
NSRYYSGINPYALGFAMFTDLRRICENPTEEDRYWFPDYAGTNWVDTLHFAMQNFKDESFISQFLSPKVMREMKLFAIDD
DDLKNYLKVSAIHNEEGYRLVRNTLSAQYNLSNLEPNIQVYNVAVKGDRSLTLRYVPHNRIPLGDSRHEVLKHLHQLWGF
DVVLEQDNGDLPADIIGRCPDKKPL

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=493, Percent_Identity=76.6734279918864, Blast_Score=829, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59619; Mature: 59619

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVETARKIPPLDDGPDWNFDLLETYHQEIARVARFYRLDTYPNQIEVITAEQMMDAYSSV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHC
GMPIGYQHWSFGKRFIHTERNYKRGQMGLAYEIVINSDPCIAYLMEENTMPMQALVMAHA
CCCCCCCHHHHCHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
CYGHNSFFKNNYLFKTWTDASSIIDYLLFAKNYITECEEKHGIDAVEKLIDSCHALMNFG
HHCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
VDRYKRPQKISLAEEKRRQKAREDYLQTQVNELWRTLPKQHKASGVEDRRYPAEPQENIL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEE
YFIEKNAPLLEPWQREIVRIVRKISQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKIS
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
DRFMIEVLHSHTNVVYQPPYNSRYYSGINPYALGFAMFTDLRRICENPTEEDRYWFPDYA
HHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
GTNWVDTLHFAMQNFKDESFISQFLSPKVMREMKLFAIDDDDLKNYLKVSAIHNEEGYRL
CCCHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHEEEECCHHHHHHHHHHEEECCCHHHH
VRNTLSAQYNLSNLEPNIQVYNVAVKGDRSLTLRYVPHNRIPLGDSRHEVLKHLHQLWGF
HHHHHHCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC
DVVLEQDNGDLPADIIGRCPDKKPL
EEEEECCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MVETARKIPPLDDGPDWNFDLLETYHQEIARVARFYRLDTYPNQIEVITAEQMMDAYSSV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHC
GMPIGYQHWSFGKRFIHTERNYKRGQMGLAYEIVINSDPCIAYLMEENTMPMQALVMAHA
CCCCCCCHHHHCHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHH
CYGHNSFFKNNYLFKTWTDASSIIDYLLFAKNYITECEEKHGIDAVEKLIDSCHALMNFG
HHCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
VDRYKRPQKISLAEEKRRQKAREDYLQTQVNELWRTLPKQHKASGVEDRRYPAEPQENIL
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEE
YFIEKNAPLLEPWQREIVRIVRKISQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGKIS
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
DRFMIEVLHSHTNVVYQPPYNSRYYSGINPYALGFAMFTDLRRICENPTEEDRYWFPDYA
HHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC
GTNWVDTLHFAMQNFKDESFISQFLSPKVMREMKLFAIDDDDLKNYLKVSAIHNEEGYRL
CCCHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHEEEECCHHHHHHHHHHEEECCCHHHH
VRNTLSAQYNLSNLEPNIQVYNVAVKGDRSLTLRYVPHNRIPLGDSRHEVLKHLHQLWGF
HHHHHHCCCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCC
DVVLEQDNGDLPADIIGRCPDKKPL
EEEEECCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]