| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is arbF [H]
Identifier: 145296705
GI number: 145296705
Start: 2879912
End: 2881918
Strand: Reverse
Name: arbF [H]
Synonym: cgR_2610
Alternate gene names: 145296705
Gene position: 2881918-2879912 (Counterclockwise)
Preceding gene: 145296706
Following gene: 145296704
Centisome position: 86.96
GC content: 52.67
Gene sequence:
>2007_bases ATGGCCACAAAAGTGGATTATCAAGCCCTTTCGGGCGAGATTATGTCGCGCATCGGTGGGGAAGAAAACGTTTCTTCAGT TGTTCACTGCGCAACGCGTTTAAGGTTTGTACTCAAAGATCGCTCCAAAGCGAACGATGACGAAATTAAGAAGCTGCCAG GTGTTATCACCGTTGTGGAATCCGGTGGTCAGTTCCAGGTCGTGATTGGTAACAACGTTCCTCAGGTTTATGCAGCACTA CCGGCGTCGATCACTGCGGATTCAGAAGGCGCTGCGCAAGGTGGAGGTTCTGGAAACTTCCTCGGCAAAGCAGTGGATAT CGTATCTTCCATCTTTGCTCCGATTCTGGGCCCAATGGCTGGTGTCGGTATCCTCAAAGGCCTTCTAGCTGTTGCAGCTG CCGCGCACTGGGTGGATACGACATCCACGACCTATCAGATTCTTTATGCTGCAGGCGACGCCTTCTTCATGTTCTTGCCA GTCATTTTGGCGATTACTGCGGCTCGTAAATTTGGTGCCAATGTATTCACCTCGGTGGCTCTAGCTGGTGCATTGCTGTA CACACAGCTTCAGGCAGTAACCGTGTTGGTTGACGGCGAAGTCCAGTCGATGACTCTGCTGGCTTTCCAAAAGGCTGGCA ATGACGTCACCTTCCTGGGCATTCCAGTGGTGCTGCAGTCTTATACCTCCACTGTTATCCCAATCATCATCGCGGTGTGG GTGCAGTCGTTGCTGGAACGCCAGGTGGCTAAGGTTCTGCACGAGTCGATCCGAAACTTCATCCTCCCTATGGTCGTGTT GGCTGTCATGGTGCCGCTCACCTTGGCAACACTTGGACCTGCAGGCGTATGGATTGGTAATGGTTTGGCTGCAGTTCTGC AGTCGGCTTACGATTTCTCCCCAATTGTCTCCGGCATTCTCATTGCGATGCTGTGGCAGGTCATGGTTATCTTCGGTGTG CACTGGGGAATCGTCCCAGTGTTCATCAATAATATTTCCATCAATGGGTTTGATCCCCTCAAGGCAGCATGTTTCCCTGC AGTGTTGTCCCAAGCAGGCGCAGCGTTTGGATTGTTCCTTCGACTCCGTGACAAGCAGCAAAAAGCACTGTCTGGCTCAG CAGCACTTGCCGGCATCTTTGGAATTACGGAACCTGCCGTTTACGGTGTGACTCTTCCTCGAAAGCGTCCGTTTGTTATC GCTGTGATCTCTGCAGGTGTGGGTGGTGCGATCATCGGTGCAACATCCACCATGGTTTATGGAACCGGTGCACCAGGCCT GCTGACTCTTCCAATCGGCATTGATCCATCCGGCGCCAACAACACCATCGGTTGGTTGATCGGTGGCACCGCAGTGTCCT TCGTTCTGGCAGCTGTCCTAACCTACTTCTTCGGAATGACAAAAGAAGACCTGGTAAAGGATGCCACCGCAGCAGCAGAT CAGAAGTTGGCGGCGGAAGTTGATGCGGAAGCAGAAGAAGCTGCACCAGTCGCAGAAGGAGAGTTCACCTCCGTTGCATT ATCTACTCCAGTAGAAGGCACCTTGGTGTCCCTGACTGAAGTGAATGATCCAGTATTCAGTAGCGGAAAAATGGGCGACG GAATCGTTGTTCTACCAAGCTCCGGAAAGATCTATGCACCGTGCGATGCAACAGTGAAGGTAGCCATGAAAACCGGCCAC GCCTTCGGACTGCGGACATCTGGGGGAGTGGACGTACTCATCCACATCGGTATCGACACTGTATCCCTGGCCGGCGAAGG ATTCATCGCACATATCCAACGAGGCGACTGCGTTAAAGCTGGCGATCTGTTGGCCGAAGTCGATCTGGACCTGCTCCGCG AAAAGGGTTTGGATCCGTCAACGATCCTGCTGGTGACAAATTCCTCTAAATTTCGCGTTGAAACCTCCACGGTGTTTGGA CCAGTCAATGTTGGACAGGAGGTGATCCAGGTTCAGCCTGCTGACTCTTCGGCAGACCCAACAGCTCAACTAACAGCACA CGCTTAA
Upstream 100 bases:
>100_bases TGTCTCCTTTTAGGATGCATTTTCGCCACCGGTGGCCAGGTTTTTTGCATTTCAGAAACGGATGGAAAGCAGTCCTTAAA GGTTTTTAGGGAGGTCCATC
Downstream 100 bases:
>100_bases AACCATCGGATTCCTTCTTCAGCTCTAGGGCTAGGGAGGAATCTTGGTACGAGTCCACATACTTGCATTAATACAGAAAG ATTTAGCTAACCATGCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: EIIBCA-Bgl; EII-Bgl; Beta-glucoside-specific phosphotransferase enzyme IIB component; PTS system beta-glucoside-specific EIIB component; Beta-glucoside permease IIC component; PTS system beta-glucoside-specific EIIC component; Beta-glucoside-specific phosphotransferase enzyme IIA component; PTS system beta-glucoside-specific EIIA component [H]
Number of amino acids: Translated: 668; Mature: 667
Protein sequence:
>668_residues MATKVDYQALSGEIMSRIGGEENVSSVVHCATRLRFVLKDRSKANDDEIKKLPGVITVVESGGQFQVVIGNNVPQVYAAL PASITADSEGAAQGGGSGNFLGKAVDIVSSIFAPILGPMAGVGILKGLLAVAAAAHWVDTTSTTYQILYAAGDAFFMFLP VILAITAARKFGANVFTSVALAGALLYTQLQAVTVLVDGEVQSMTLLAFQKAGNDVTFLGIPVVLQSYTSTVIPIIIAVW VQSLLERQVAKVLHESIRNFILPMVVLAVMVPLTLATLGPAGVWIGNGLAAVLQSAYDFSPIVSGILIAMLWQVMVIFGV HWGIVPVFINNISINGFDPLKAACFPAVLSQAGAAFGLFLRLRDKQQKALSGSAALAGIFGITEPAVYGVTLPRKRPFVI AVISAGVGGAIIGATSTMVYGTGAPGLLTLPIGIDPSGANNTIGWLIGGTAVSFVLAAVLTYFFGMTKEDLVKDATAAAD QKLAAEVDAEAEEAAPVAEGEFTSVALSTPVEGTLVSLTEVNDPVFSSGKMGDGIVVLPSSGKIYAPCDATVKVAMKTGH AFGLRTSGGVDVLIHIGIDTVSLAGEGFIAHIQRGDCVKAGDLLAEVDLDLLREKGLDPSTILLVTNSSKFRVETSTVFG PVNVGQEVIQVQPADSSADPTAQLTAHA
Sequences:
>Translated_668_residues MATKVDYQALSGEIMSRIGGEENVSSVVHCATRLRFVLKDRSKANDDEIKKLPGVITVVESGGQFQVVIGNNVPQVYAAL PASITADSEGAAQGGGSGNFLGKAVDIVSSIFAPILGPMAGVGILKGLLAVAAAAHWVDTTSTTYQILYAAGDAFFMFLP VILAITAARKFGANVFTSVALAGALLYTQLQAVTVLVDGEVQSMTLLAFQKAGNDVTFLGIPVVLQSYTSTVIPIIIAVW VQSLLERQVAKVLHESIRNFILPMVVLAVMVPLTLATLGPAGVWIGNGLAAVLQSAYDFSPIVSGILIAMLWQVMVIFGV HWGIVPVFINNISINGFDPLKAACFPAVLSQAGAAFGLFLRLRDKQQKALSGSAALAGIFGITEPAVYGVTLPRKRPFVI AVISAGVGGAIIGATSTMVYGTGAPGLLTLPIGIDPSGANNTIGWLIGGTAVSFVLAAVLTYFFGMTKEDLVKDATAAAD QKLAAEVDAEAEEAAPVAEGEFTSVALSTPVEGTLVSLTEVNDPVFSSGKMGDGIVVLPSSGKIYAPCDATVKVAMKTGH AFGLRTSGGVDVLIHIGIDTVSLAGEGFIAHIQRGDCVKAGDLLAEVDLDLLREKGLDPSTILLVTNSSKFRVETSTVFG PVNVGQEVIQVQPADSSADPTAQLTAHA >Mature_667_residues ATKVDYQALSGEIMSRIGGEENVSSVVHCATRLRFVLKDRSKANDDEIKKLPGVITVVESGGQFQVVIGNNVPQVYAALP ASITADSEGAAQGGGSGNFLGKAVDIVSSIFAPILGPMAGVGILKGLLAVAAAAHWVDTTSTTYQILYAAGDAFFMFLPV ILAITAARKFGANVFTSVALAGALLYTQLQAVTVLVDGEVQSMTLLAFQKAGNDVTFLGIPVVLQSYTSTVIPIIIAVWV QSLLERQVAKVLHESIRNFILPMVVLAVMVPLTLATLGPAGVWIGNGLAAVLQSAYDFSPIVSGILIAMLWQVMVIFGVH WGIVPVFINNISINGFDPLKAACFPAVLSQAGAAFGLFLRLRDKQQKALSGSAALAGIFGITEPAVYGVTLPRKRPFVIA VISAGVGGAIIGATSTMVYGTGAPGLLTLPIGIDPSGANNTIGWLIGGTAVSFVLAAVLTYFFGMTKEDLVKDATAAADQ KLAAEVDAEAEEAAPVAEGEFTSVALSTPVEGTLVSLTEVNDPVFSSGKMGDGIVVLPSSGKIYAPCDATVKVAMKTGHA FGLRTSGGVDVLIHIGIDTVSLAGEGFIAHIQRGDCVKAGDLLAEVDLDLLREKGLDPSTILLVTNSSKFRVETSTVFGP VNVGQEVIQVQPADSSADPTAQLTAHA
Specific function: Acts as both a kinase and a phosphatase on ArbG [H]
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790159, Length=633, Percent_Identity=41.2322274881517, Blast_Score=467, Evalue=1e-132, Organism=Escherichia coli, GI48994906, Length=494, Percent_Identity=29.9595141700405, Blast_Score=216, Evalue=5e-57, Organism=Escherichia coli, GI2367362, Length=457, Percent_Identity=28.2275711159737, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI1788769, Length=500, Percent_Identity=26.2, Blast_Score=126, Evalue=5e-30, Organism=Escherichia coli, GI1788757, Length=143, Percent_Identity=37.0629370629371, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1786894, Length=125, Percent_Identity=35.2, Blast_Score=87, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011297 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 69193; Mature: 69062
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKVDYQALSGEIMSRIGGEENVSSVVHCATRLRFVLKDRSKANDDEIKKLPGVITVVE CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEE SGGQFQVVIGNNVPQVYAALPASITADSEGAAQGGGSGNFLGKAVDIVSSIFAPILGPMA CCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GVGILKGLLAVAAAAHWVDTTSTTYQILYAAGDAFFMFLPVILAITAARKFGANVFTSVA HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHH LAGALLYTQLQAVTVLVDGEVQSMTLLAFQKAGNDVTFLGIPVVLQSYTSTVIPIIIAVW HHHHHHHHHHEEEEEEECCCCHHEEEEEEHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH VQSLLERQVAKVLHESIRNFILPMVVLAVMVPLTLATLGPAGVWIGNGLAAVLQSAYDFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHCCHH PIVSGILIAMLWQVMVIFGVHWGIVPVFINNISINGFDPLKAACFPAVLSQAGAAFGLFL HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHE RLRDKQQKALSGSAALAGIFGITEPAVYGVTLPRKRPFVIAVISAGVGGAIIGATSTMVY EEHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEECCEEEEE GTGAPGLLTLPIGIDPSGANNTIGWLIGGTAVSFVLAAVLTYFFGMTKEDLVKDATAAAD ECCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QKLAAEVDAEAEEAAPVAEGEFTSVALSTPVEGTLVSLTEVNDPVFSSGKMGDGIVVLPS HHHHHHCCCCHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEECC SGKIYAPCDATVKVAMKTGHAFGLRTSGGVDVLIHIGIDTVSLAGEGFIAHIQRGDCVKA CCCEEECCCCEEEEEEECCCEEEEECCCCCEEEEEECCCEEEECCCCEEEEECCCCCCCH GDLLAEVDLDLLREKGLDPSTILLVTNSSKFRVETSTVFGPVNVGQEVIQVQPADSSADP HHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECEEECCHHCCCCCEEEECCCCCCCC TAQLTAHA CCEEEECC >Mature Secondary Structure ATKVDYQALSGEIMSRIGGEENVSSVVHCATRLRFVLKDRSKANDDEIKKLPGVITVVE CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEE SGGQFQVVIGNNVPQVYAALPASITADSEGAAQGGGSGNFLGKAVDIVSSIFAPILGPMA CCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GVGILKGLLAVAAAAHWVDTTSTTYQILYAAGDAFFMFLPVILAITAARKFGANVFTSVA HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHH LAGALLYTQLQAVTVLVDGEVQSMTLLAFQKAGNDVTFLGIPVVLQSYTSTVIPIIIAVW HHHHHHHHHHEEEEEEECCCCHHEEEEEEHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHH VQSLLERQVAKVLHESIRNFILPMVVLAVMVPLTLATLGPAGVWIGNGLAAVLQSAYDFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHCCHH PIVSGILIAMLWQVMVIFGVHWGIVPVFINNISINGFDPLKAACFPAVLSQAGAAFGLFL HHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHE RLRDKQQKALSGSAALAGIFGITEPAVYGVTLPRKRPFVIAVISAGVGGAIIGATSTMVY EEHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEECCEEEEE GTGAPGLLTLPIGIDPSGANNTIGWLIGGTAVSFVLAAVLTYFFGMTKEDLVKDATAAAD ECCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QKLAAEVDAEAEEAAPVAEGEFTSVALSTPVEGTLVSLTEVNDPVFSSGKMGDGIVVLPS HHHHHHCCCCHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEECC SGKIYAPCDATVKVAMKTGHAFGLRTSGGVDVLIHIGIDTVSLAGEGFIAHIQRGDCVKA CCCEEECCCCEEEEEEECCCEEEEECCCCCEEEEEECCCEEEECCCCEEEEECCCCCCCH GDLLAEVDLDLLREKGLDPSTILLVTNSSKFRVETSTVFGPVNVGQEVIQVQPADSSADP HHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECEEECCHHCCCCCEEEECCCCCCCC TAQLTAHA CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1732212 [H]