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The map label for this gene is dppB [H]

Identifier: 145295895

GI number: 145295895

Start: 2021048

End: 2021974

Strand: Direct

Name: dppB [H]

Synonym: cgR_1820

Alternate gene names: 145295895

Gene position: 2021048-2021974 (Clockwise)

Preceding gene: 145295894

Following gene: 145295896

Centisome position: 60.98

GC content: 53.51

Gene sequence:

>927_bases
ATGCTTCGTTACGTCGGGCGACGTTTGCTCCAAATGATTCCGGTCTTTTTCGGAGCGACCTTACTGATTTACGCCCTCGT
GTTCCTCATGCCTGGTGACCCAGTCCAGGCATTGGGAGGTGACCGCGGCCTAACCGAGGCTGCGGCCGAGAAAATCCGTC
AAGAATACAATCTTGATAAACCCTTCATCGTTCAATACCTCCTGTACATCAAGGGCATCTTCGTCTTAGATTTTGGAACA
ACCTTCTCTGGTCAGCCAGTTATTGATGTGATGGCCAGGGCCTTCCCCGTCACCATCAAACTCGCCATCATGGCCCTGCT
GTTTGAATCAATCCTCGGCATTATCTTTGGTGTCATCGCAGGTATTCGCCGCGGAGGAATCTTCGACTCCACCGTGCTGG
TCCTTTCTCTGATAGTCATCGCACTCCCCACCTTCGTCATTGGTTTCGTGCTGCAGTTCTTAGTCGGCGTGAAATGGGGC
TTACTGCCCGTCACCGTAGGTTCCAACACATCAATAACGGCGCTGATCATGCCGGCTGTCGTACTGGGTGCAGTATCGTT
CGCCTACGTTCTTCGCCTCACCAGACAATCCGTGAGCGAAAACCTCCGCGCTGATTACGTTCGAACCGCTCGAGCAAAAG
GCATGTCCGGATTCAACGTGATGAACCGCCATGTGCTTCGAAACTCACTGATTCCCGTTGCCACCTTCCTGGGCGCCGAT
CTCGGTGCACTGATGGGTGGAGCGATTGTCACCGAAGGTATCTTCGGCATCAACGGTGTCGGTGGAACGCTCTACCAGGC
CATTTTGAAAGGTGAACCCACCACGGTTGTCTCCATTGTCACTGTGCTGGTCATCGTCTACATCATCGCCAACCTTCTCG
TGGACTTGATCTACGCCGTTCTCGATCCGAGGATCCGCTATGCCTAA

Upstream 100 bases:

>100_bases
TCACCTTGAACACTTGAAACATAACTTCATCCGGCGCTTTATTAGCTTGAAGCGCCCCGCACCATAATCCATTCCCCAGC
AAGCAAGGACACCCACGCTC

Downstream 100 bases:

>100_bases
TAATGAATTCCACACAAACCACTCGTTGGGCCAAGATGATCAAACCCCAGATCAGGCTCATTTCTTCCCACAAGGACGAG
GCGAGGCTCTAGTTCGACCA

Product: hypothetical protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MLRYVGRRLLQMIPVFFGATLLIYALVFLMPGDPVQALGGDRGLTEAAAEKIRQEYNLDKPFIVQYLLYIKGIFVLDFGT
TFSGQPVIDVMARAFPVTIKLAIMALLFESILGIIFGVIAGIRRGGIFDSTVLVLSLIVIALPTFVIGFVLQFLVGVKWG
LLPVTVGSNTSITALIMPAVVLGAVSFAYVLRLTRQSVSENLRADYVRTARAKGMSGFNVMNRHVLRNSLIPVATFLGAD
LGALMGGAIVTEGIFGINGVGGTLYQAILKGEPTTVVSIVTVLVIVYIIANLLVDLIYAVLDPRIRYA

Sequences:

>Translated_308_residues
MLRYVGRRLLQMIPVFFGATLLIYALVFLMPGDPVQALGGDRGLTEAAAEKIRQEYNLDKPFIVQYLLYIKGIFVLDFGT
TFSGQPVIDVMARAFPVTIKLAIMALLFESILGIIFGVIAGIRRGGIFDSTVLVLSLIVIALPTFVIGFVLQFLVGVKWG
LLPVTVGSNTSITALIMPAVVLGAVSFAYVLRLTRQSVSENLRADYVRTARAKGMSGFNVMNRHVLRNSLIPVATFLGAD
LGALMGGAIVTEGIFGINGVGGTLYQAILKGEPTTVVSIVTVLVIVYIIANLLVDLIYAVLDPRIRYA
>Mature_308_residues
MLRYVGRRLLQMIPVFFGATLLIYALVFLMPGDPVQALGGDRGLTEAAAEKIRQEYNLDKPFIVQYLLYIKGIFVLDFGT
TFSGQPVIDVMARAFPVTIKLAIMALLFESILGIIFGVIAGIRRGGIFDSTVLVLSLIVIALPTFVIGFVLQFLVGVKWG
LLPVTVGSNTSITALIMPAVVLGAVSFAYVLRLTRQSVSENLRADYVRTARAKGMSGFNVMNRHVLRNSLIPVATFLGAD
LGALMGGAIVTEGIFGINGVGGTLYQAILKGEPTTVVSIVTVLVIVYIIANLLVDLIYAVLDPRIRYA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=37.6854599406528, Blast_Score=218, Evalue=3e-58,
Organism=Escherichia coli, GI1787053, Length=308, Percent_Identity=36.038961038961, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI1787497, Length=309, Percent_Identity=32.3624595469256, Blast_Score=171, Evalue=7e-44,
Organism=Escherichia coli, GI1789888, Length=312, Percent_Identity=33.6538461538462, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1787761, Length=327, Percent_Identity=33.0275229357798, Blast_Score=133, Evalue=1e-32,
Organism=Escherichia coli, GI1787550, Length=268, Percent_Identity=27.9850746268657, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1788504, Length=360, Percent_Identity=25.2777777777778, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33257; Mature: 33257

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYVGRRLLQMIPVFFGATLLIYALVFLMPGDPVQALGGDRGLTEAAAEKIRQEYNLDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCC
PFIVQYLLYIKGIFVLDFGTTFSGQPVIDVMARAFPVTIKLAIMALLFESILGIIFGVIA
HHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIRRGGIFDSTVLVLSLIVIALPTFVIGFVLQFLVGVKWGLLPVTVGSNTSITALIMPAV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
VLGAVSFAYVLRLTRQSVSENLRADYVRTARAKGMSGFNVMNRHVLRNSLIPVATFLGAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LGALMGGAIVTEGIFGINGVGGTLYQAILKGEPTTVVSIVTVLVIVYIIANLLVDLIYAV
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPRIRYA
HCCCCCCC
>Mature Secondary Structure
MLRYVGRRLLQMIPVFFGATLLIYALVFLMPGDPVQALGGDRGLTEAAAEKIRQEYNLDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCC
PFIVQYLLYIKGIFVLDFGTTFSGQPVIDVMARAFPVTIKLAIMALLFESILGIIFGVIA
HHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIRRGGIFDSTVLVLSLIVIALPTFVIGFVLQFLVGVKWGLLPVTVGSNTSITALIMPAV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
VLGAVSFAYVLRLTRQSVSENLRADYVRTARAKGMSGFNVMNRHVLRNSLIPVATFLGAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LGALMGGAIVTEGIFGINGVGGTLYQAILKGEPTTVVSIVTVLVIVYIIANLLVDLIYAV
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPRIRYA
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]