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The map label for this gene is dppE [H]

Identifier: 145295894

GI number: 145295894

Start: 2019271

End: 2020869

Strand: Direct

Name: dppE [H]

Synonym: cgR_1819

Alternate gene names: 145295894

Gene position: 2019271-2020869 (Clockwise)

Preceding gene: 145295893

Following gene: 145295895

Centisome position: 60.93

GC content: 56.47

Gene sequence:

>1599_bases
ATGACTTTGAAGAAGTCTCTCGCCGTAACAACGGCGGCCGCACTTGCTCTAAGCCTTGCTGCCTGCTCGTCTGACTCATC
AGACAGCTCCGCATCAGGTGGCGACACCGGGGGCGACAACTACGTCCTCGTCAACGGCACTGAGCCTCAGAACCCACTCG
TTCCAGGCAACACCAACGAAGTGGGTGGCGGCCGCATCGTCGACAGCATTTTCGCAGGTCTGGTCTACTACGACATCGAC
GGCTCCGCAGTCAACGATGTTGCAGAGTCCATCGAACTCGAAGGTGACAAGACCTACCGCATCACCATCAAAGACGGCCA
GACCTTCACCGATGGCACCCCAGTTACCGCTGAGAGCTTTGTCAACGCATGGAACTACAACGTAGCTAACAGCACGCTGT
CCTCATACTTCTTCGAGTCCATCCTCGGGTACGAAGAAGGCGTCGAGTCCATGGAAGGCCTCCAGGTTGTCGATGACACC
ACCTTCACCGTGGAACTAACCCAGCCTGAATCTGACTTCCCGCTCCGCCTGGGATACTCCGCGTTCTTCCCACTTCCAGA
TTCCGCACTGGAGGATATGGCTGCATTCGGTGAAAACCCAGTGGGCAACGGACCATACAAGCTGCTTGAGTGGAACCACA
ACCAAGACGCCACCATCGTTCCAAACGAAGACTACGACGGCGGCCGTGCAGCACAGAACGACGGCATCAAGTTCGTCTTC
TACCCCACCTTCGATTCTGCCTACGCAGATCTCCTCTCTGACAACCTCGATGTTCTAGATAGCATCCCAGACTCTGCTTT
CTCCACCTTTGAGGATGAGCTTTCTGGTCGCTCCATCAACCAGGCATCGGCAGTGTTCCAGTCCTTCACCATCCCAGAGC
GCCTCGAGCACTTCTCCGGTGAAGAAGGCGTTCTGCGTCGCCAGGCCATCTCCTTGGCTATCAACCGCGATGAGATCACC
CAAACCATCTTCGAAGGCACCCGCACCCCAGCGACTGACTTCACCTCCCCAGTCATTGCTGGTCACTCTGATTCCCTTAC
GGGCGCAGATGTTTTGACCTACGATCCAGATCGCGCAAAGGATCTTTGGGCACAGGCAGATGCTATTAGCCCATGGTCCG
GTGAATTCACCATCTCCTACAACGCTGACGGTGGACACCAGGCATGGGTCGATGCAACCGCAAACTCCATCCGCAACACC
CTGGGAATTGATGCCCTGGGCAACCCATACCCAGACTTCAAGTCCCTGCGCGACGATGTCACCAACCGCACCATCAACGG
CGCATTCCGCACCGGCTGGCAGGCAGACTACCCGTCCTTGGGCAACTTCCTCGGACCTTTGTACGGCACCGGTGCAGGCT
CCAACGATGGTGACTACTCCAACCCAGATTTCGATGCCAAGCTCGCCGAAGCAGCAAACGCGGCCGATGTTGACGCATCA
ACCCCGCTATACAACGAAGCACAGGAAATCCTGCTCCAGGATCTCCCAGCGATCCCAACTTGGTACTCCAACGCAGTCGG
TGGATACTCCACCAATGTGGACAACGTGGAATTCCAGTGGAACTCGCAACCTGCGTACTACCAGATCACCAAGAACTAG

Upstream 100 bases:

>100_bases
TCAAGTTTGGCTGTGACTCATGTCGCACATAGTATTTCAAGCACAGGATCCCACTCGGCTGAACAGCTCAGGGGAATATT
CATAACAACGGAGGTCAATC

Downstream 100 bases:

>100_bases
TAGCTTCGCACCACCCGCTCATCTTGTGTGAGCTCTAGAAGAAAGGCCCAGGTTAATGTTCACCCCGACCTGGGCCTTTC
ACCTTGAACACTTGAAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MTLKKSLAVTTAAALALSLAACSSDSSDSSASGGDTGGDNYVLVNGTEPQNPLVPGNTNEVGGGRIVDSIFAGLVYYDID
GSAVNDVAESIELEGDKTYRITIKDGQTFTDGTPVTAESFVNAWNYNVANSTLSSYFFESILGYEEGVESMEGLQVVDDT
TFTVELTQPESDFPLRLGYSAFFPLPDSALEDMAAFGENPVGNGPYKLLEWNHNQDATIVPNEDYDGGRAAQNDGIKFVF
YPTFDSAYADLLSDNLDVLDSIPDSAFSTFEDELSGRSINQASAVFQSFTIPERLEHFSGEEGVLRRQAISLAINRDEIT
QTIFEGTRTPATDFTSPVIAGHSDSLTGADVLTYDPDRAKDLWAQADAISPWSGEFTISYNADGGHQAWVDATANSIRNT
LGIDALGNPYPDFKSLRDDVTNRTINGAFRTGWQADYPSLGNFLGPLYGTGAGSNDGDYSNPDFDAKLAEAANAADVDAS
TPLYNEAQEILLQDLPAIPTWYSNAVGGYSTNVDNVEFQWNSQPAYYQITKN

Sequences:

>Translated_532_residues
MTLKKSLAVTTAAALALSLAACSSDSSDSSASGGDTGGDNYVLVNGTEPQNPLVPGNTNEVGGGRIVDSIFAGLVYYDID
GSAVNDVAESIELEGDKTYRITIKDGQTFTDGTPVTAESFVNAWNYNVANSTLSSYFFESILGYEEGVESMEGLQVVDDT
TFTVELTQPESDFPLRLGYSAFFPLPDSALEDMAAFGENPVGNGPYKLLEWNHNQDATIVPNEDYDGGRAAQNDGIKFVF
YPTFDSAYADLLSDNLDVLDSIPDSAFSTFEDELSGRSINQASAVFQSFTIPERLEHFSGEEGVLRRQAISLAINRDEIT
QTIFEGTRTPATDFTSPVIAGHSDSLTGADVLTYDPDRAKDLWAQADAISPWSGEFTISYNADGGHQAWVDATANSIRNT
LGIDALGNPYPDFKSLRDDVTNRTINGAFRTGWQADYPSLGNFLGPLYGTGAGSNDGDYSNPDFDAKLAEAANAADVDAS
TPLYNEAQEILLQDLPAIPTWYSNAVGGYSTNVDNVEFQWNSQPAYYQITKN
>Mature_531_residues
TLKKSLAVTTAAALALSLAACSSDSSDSSASGGDTGGDNYVLVNGTEPQNPLVPGNTNEVGGGRIVDSIFAGLVYYDIDG
SAVNDVAESIELEGDKTYRITIKDGQTFTDGTPVTAESFVNAWNYNVANSTLSSYFFESILGYEEGVESMEGLQVVDDTT
FTVELTQPESDFPLRLGYSAFFPLPDSALEDMAAFGENPVGNGPYKLLEWNHNQDATIVPNEDYDGGRAAQNDGIKFVFY
PTFDSAYADLLSDNLDVLDSIPDSAFSTFEDELSGRSINQASAVFQSFTIPERLEHFSGEEGVLRRQAISLAINRDEITQ
TIFEGTRTPATDFTSPVIAGHSDSLTGADVLTYDPDRAKDLWAQADAISPWSGEFTISYNADGGHQAWVDATANSIRNTL
GIDALGNPYPDFKSLRDDVTNRTINGAFRTGWQADYPSLGNFLGPLYGTGAGSNDGDYSNPDFDAKLAEAANAADVDAST
PLYNEAQEILLQDLPAIPTWYSNAVGGYSTNVDNVEFQWNSQPAYYQITKN

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87081878, Length=545, Percent_Identity=25.6880733944954, Blast_Score=132, Evalue=5e-32,
Organism=Escherichia coli, GI1789397, Length=482, Percent_Identity=28.6307053941909, Blast_Score=125, Evalue=6e-30,
Organism=Escherichia coli, GI1787495, Length=544, Percent_Identity=27.0220588235294, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1789966, Length=532, Percent_Identity=23.3082706766917, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1787762, Length=484, Percent_Identity=25.2066115702479, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57292; Mature: 57161

Theoretical pI: Translated: 3.74; Mature: 3.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKKSLAVTTAAALALSLAACSSDSSDSSASGGDTGGDNYVLVNGTEPQNPLVPGNTNE
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
VGGGRIVDSIFAGLVYYDIDGSAVNDVAESIELEGDKTYRITIKDGQTFTDGTPVTAESF
CCCHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCCCCHHHH
VNAWNYNVANSTLSSYFFESILGYEEGVESMEGLQVVDDTTFTVELTQPESDFPLRLGYS
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCEEECCE
AFFPLPDSALEDMAAFGENPVGNGPYKLLEWNHNQDATIVPNEDYDGGRAAQNDGIKFVF
EECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCEEEEE
YPTFDSAYADLLSDNLDVLDSIPDSAFSTFEDELSGRSINQASAVFQSFTIPERLEHFSG
ECCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCC
EEGVLRRQAISLAINRDEITQTIFEGTRTPATDFTSPVIAGHSDSLTGADVLTYDPDRAK
CCHHHHHHHHHEEECHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCHHH
DLWAQADAISPWSGEFTISYNADGGHQAWVDATANSIRNTLGIDALGNPYPDFKSLRDDV
HHHHHCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
TNRTINGAFRTGWQADYPSLGNFLGPLYGTGAGSNDGDYSNPDFDAKLAEAANAADVDAS
HCCEECCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
TPLYNEAQEILLQDLPAIPTWYSNAVGGYSTNVDNVEFQWNSQPAYYQITKN
CCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCEEEEECC
>Mature Secondary Structure 
TLKKSLAVTTAAALALSLAACSSDSSDSSASGGDTGGDNYVLVNGTEPQNPLVPGNTNE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
VGGGRIVDSIFAGLVYYDIDGSAVNDVAESIELEGDKTYRITIKDGQTFTDGTPVTAESF
CCCHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCCEEEEEEECCCEECCCCCCCHHHH
VNAWNYNVANSTLSSYFFESILGYEEGVESMEGLQVVDDTTFTVELTQPESDFPLRLGYS
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCEEECCE
AFFPLPDSALEDMAAFGENPVGNGPYKLLEWNHNQDATIVPNEDYDGGRAAQNDGIKFVF
EECCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCEEEEE
YPTFDSAYADLLSDNLDVLDSIPDSAFSTFEDELSGRSINQASAVFQSFTIPERLEHFSG
ECCCCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHCCC
EEGVLRRQAISLAINRDEITQTIFEGTRTPATDFTSPVIAGHSDSLTGADVLTYDPDRAK
CCHHHHHHHHHEEECHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCHHH
DLWAQADAISPWSGEFTISYNADGGHQAWVDATANSIRNTLGIDALGNPYPDFKSLRDDV
HHHHHCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
TNRTINGAFRTGWQADYPSLGNFLGPLYGTGAGSNDGDYSNPDFDAKLAEAANAADVDAS
HCCEECCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
TPLYNEAQEILLQDLPAIPTWYSNAVGGYSTNVDNVEFQWNSQPAYYQITKN
CCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]