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The map label for this gene is oppC [H]

Identifier: 145295896

GI number: 145295896

Start: 2021967

End: 2023001

Strand: Direct

Name: oppC [H]

Synonym: cgR_1821

Alternate gene names: 145295896

Gene position: 2021967-2023001 (Clockwise)

Preceding gene: 145295895

Following gene: 145295897

Centisome position: 61.01

GC content: 54.59

Gene sequence:

>1035_bases
ATGCCTAATAATGAATTCCACACAAACCACTCGTTGGGCCAAGATGATCAAACCCCAGATCAGGCTCATTTCTTCCCACA
AGGACGAGGCGAGGCTCTAGTTCGACCAGGTCAAGAGCACTTCATCGCAGCCACTGATGAAACCGGACTTGGTGCCGTCG
ATGCTGTTGCTGATGACTCTGCACCCACCTCCATGTGGGGCGAAGCGTGGCGAGACCTTCGTCGTCGACCACTGTTCTGG
GTCTCTGCGGTGTTGATTATTTTGGCGCTTCTCCTGGCCGCAGTTCCGCAGCTGTTTACCTCAACGGATCCCCAGTTCTG
TGTGCTGGCAAACTCTCTTGATGGTCCACAGTCTGGACATCCCTTCGGATTCGACCGTCAAGGTTGCGATATTTTTGCTC
GTACCGTCTACGGTGCTCGTGCCTCGGTCGCCGTCGGTGTGTTGACCACGTTACTGGTCGCCCTCATCGGCACTGTATTT
GGTGCTTTGGCTGGGTTCTTTGGTGGCATCATGGATACCATCCTCTCCCGCATCACCGACATGTTCTTCGCCATTCCACT
GGTTCTGGCAGCCATCGTTGTGATGCAGATGTTCAAGGAACACCGCACCATCGTCACCGTGGTTTTGGTGCTTGGGCTTT
TCGGCTGGACCAACATTGCGCGTATTACCCGTGGAGCGGTGATGACCGCAAAGAATGAAGAGTATGTCACCTCCGCACGT
GCGCTTGGTGCATCAAAAGCCAAGATACTGCTGTCTCACATCATGCCAAACGCCGCAGCACCCATCATTGTGTATGCAAC
TGTGGCACTGGGAACATTCATCGTGGCAGAGGCGACGCTCTCCTTCCTGGGCATTGGCCTTCCACCATCAATTGTCTCCT
GGGGTGCTGATATCGCGAAGGCACAAACCTCCCTTCGTACCCAACCCATGGTGCTGTTCTACCCCGCAATGGCACTTGCA
CTAACCGTTTTGAGCTTCATCATGATGGGCGATGTCGTCCGCGACGCTCTGGATCCTAAGTCGAGGAAGCGATGA

Upstream 100 bases:

>100_bases
ACCACGGTTGTCTCCATTGTCACTGTGCTGGTCATCGTCTACATCATCGCCAACCTTCTCGTGGACTTGATCTACGCCGT
TCTCGATCCGAGGATCCGCT

Downstream 100 bases:

>100_bases
CCACCAACATCCCACAAACCCCCAACCACGAGGGTGAACAGCCACTGCTCGAGCTGAAGGATCTAAAGATTTCCTTCACC
TCCTCCACCGGTGTTGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MPNNEFHTNHSLGQDDQTPDQAHFFPQGRGEALVRPGQEHFIAATDETGLGAVDAVADDSAPTSMWGEAWRDLRRRPLFW
VSAVLIILALLLAAVPQLFTSTDPQFCVLANSLDGPQSGHPFGFDRQGCDIFARTVYGARASVAVGVLTTLLVALIGTVF
GALAGFFGGIMDTILSRITDMFFAIPLVLAAIVVMQMFKEHRTIVTVVLVLGLFGWTNIARITRGAVMTAKNEEYVTSAR
ALGASKAKILLSHIMPNAAAPIIVYATVALGTFIVAEATLSFLGIGLPPSIVSWGADIAKAQTSLRTQPMVLFYPAMALA
LTVLSFIMMGDVVRDALDPKSRKR

Sequences:

>Translated_344_residues
MPNNEFHTNHSLGQDDQTPDQAHFFPQGRGEALVRPGQEHFIAATDETGLGAVDAVADDSAPTSMWGEAWRDLRRRPLFW
VSAVLIILALLLAAVPQLFTSTDPQFCVLANSLDGPQSGHPFGFDRQGCDIFARTVYGARASVAVGVLTTLLVALIGTVF
GALAGFFGGIMDTILSRITDMFFAIPLVLAAIVVMQMFKEHRTIVTVVLVLGLFGWTNIARITRGAVMTAKNEEYVTSAR
ALGASKAKILLSHIMPNAAAPIIVYATVALGTFIVAEATLSFLGIGLPPSIVSWGADIAKAQTSLRTQPMVLFYPAMALA
LTVLSFIMMGDVVRDALDPKSRKR
>Mature_343_residues
PNNEFHTNHSLGQDDQTPDQAHFFPQGRGEALVRPGQEHFIAATDETGLGAVDAVADDSAPTSMWGEAWRDLRRRPLFWV
SAVLIILALLLAAVPQLFTSTDPQFCVLANSLDGPQSGHPFGFDRQGCDIFARTVYGARASVAVGVLTTLLVALIGTVFG
ALAGFFGGIMDTILSRITDMFFAIPLVLAAIVVMQMFKEHRTIVTVVLVLGLFGWTNIARITRGAVMTAKNEEYVTSARA
LGASKAKILLSHIMPNAAAPIIVYATVALGTFIVAEATLSFLGIGLPPSIVSWGADIAKAQTSLRTQPMVLFYPAMALAL
TVLSFIMMGDVVRDALDPKSRKR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=294, Percent_Identity=37.4149659863946, Blast_Score=191, Evalue=6e-50,
Organism=Escherichia coli, GI1787498, Length=280, Percent_Identity=33.5714285714286, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1787760, Length=274, Percent_Identity=32.1167883211679, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1789964, Length=230, Percent_Identity=36.5217391304348, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=31.5573770491803, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=30.3964757709251, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1787549, Length=216, Percent_Identity=31.0185185185185, Blast_Score=85, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36945; Mature: 36813

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNNEFHTNHSLGQDDQTPDQAHFFPQGRGEALVRPGQEHFIAATDETGLGAVDAVADDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCHHHHCCCC
APTSMWGEAWRDLRRRPLFWVSAVLIILALLLAAVPQLFTSTDPQFCVLANSLDGPQSGH
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
PFGFDRQGCDIFARTVYGARASVAVGVLTTLLVALIGTVFGALAGFFGGIMDTILSRITD
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFFAIPLVLAAIVVMQMFKEHRTIVTVVLVLGLFGWTNIARITRGAVMTAKNEEYVTSAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCHHHHHHHH
ALGASKAKILLSHIMPNAAAPIIVYATVALGTFIVAEATLSFLGIGLPPSIVSWGADIAK
HHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHH
AQTSLRTQPMVLFYPAMALALTVLSFIMMGDVVRDALDPKSRKR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PNNEFHTNHSLGQDDQTPDQAHFFPQGRGEALVRPGQEHFIAATDETGLGAVDAVADDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCHHHHCCCC
APTSMWGEAWRDLRRRPLFWVSAVLIILALLLAAVPQLFTSTDPQFCVLANSLDGPQSGH
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
PFGFDRQGCDIFARTVYGARASVAVGVLTTLLVALIGTVFGALAGFFGGIMDTILSRITD
CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFFAIPLVLAAIVVMQMFKEHRTIVTVVLVLGLFGWTNIARITRGAVMTAKNEEYVTSAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEECCCHHHHHHHH
ALGASKAKILLSHIMPNAAAPIIVYATVALGTFIVAEATLSFLGIGLPPSIVSWGADIAK
HHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHH
AQTSLRTQPMVLFYPAMALALTVLSFIMMGDVVRDALDPKSRKR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]