| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is metK [H]
Identifier: 145295725
GI number: 145295725
Start: 1837785
End: 1838558
Strand: Reverse
Name: metK [H]
Synonym: cgR_1652
Alternate gene names: 145295725
Gene position: 1838558-1837785 (Counterclockwise)
Preceding gene: 145295726
Following gene: 145295724
Centisome position: 55.48
GC content: 55.43
Gene sequence:
>774_bases GTGGCTCAGCCAACCGCCGTCCGTTTGTTCACCAGTGAATCTGTAACTGAGGGACATCCAGACAAAATATGTGATGCTAT TTCCGATACCATTTTGGACGCGCTGCTCGAAAAAGATCCGCAGTCGCGCGTCGCAGTGGAAACTGTGGTCACCACCGGAA TCGTCCATGTTGTTGGCGAGGTCCGTACCAGCGCTTACGTAGAGATCCCTCAATTAGTCCGCAACAAGCTCATCGAAATC GGATTCAACTCCTCTGAGGTTGGATTCGACGGACGCACCTGTGGCGTCTCAGTATCTATCGGTGAGCAGTCCCAGGAAAT CGCTGACGGCGTGGATAACTCCGACGAAGCCCGCACCAACGGCGACGTTGAAGAAGACGACCGCGCAGGTGCTGGCGACC AGGGCCTGATGTTCGGCTACGCCACCAACGAAACCGAAGAGTACATGCCTCTTCCTATCGCGTTGGCGCACCGACTGTCA CGTCGTCTGACCCAGGTTCGTAAAGAGGGTATCGTTCCTCACCTGCGTCCAGACGGAAAAACCCAGGTCACCTTCGCATA CGATGCGCAAGACCGCCCTAGTCACCTAGATACCGTTGTCATCTCCACCCAGCACGACCCAGAAGTTGACCGTGCATGGT TGGAAACCCAGCTGCGCGAACACGTCATTGATTGGGTAATCAAAGACGCAGGCATTGAGGATCTGGCAACCGGTGAGATC ACCGTGTTGATCAACCCCTTCAGGTTCCTTCATTCTGGGTGGCCCCATGGGTGA
Upstream 100 bases:
>100_bases CAGCTAGACCACTGACATTGCAGTTTTAGACAGCTTGGTCTATATTGGTTTTTTGTATTTAAGACTATTTATTCTCAACT TCTTCGAAAGAAGGGTATTT
Downstream 100 bases:
>100_bases TGCGGGTCTGACCGGCCGCAAGATCATCGTGGATACCTACGGTGGCATGGCTCGCCATGGTGGTGGAGCATTCTCCGGTA AGGATCCAAGCAAGGTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MAQPTAVRLFTSESVTEGHPDKICDAISDTILDALLEKDPQSRVAVETVVTTGIVHVVGEVRTSAYVEIPQLVRNKLIEI GFNSSEVGFDGRTCGVSVSIGEQSQEIADGVDNSDEARTNGDVEEDDRAGAGDQGLMFGYATNETEEYMPLPIALAHRLS RRLTQVRKEGIVPHLRPDGKTQVTFAYDAQDRPSHLDTVVISTQHDPEVDRAWLETQLREHVIDWVIKDAGIEDLATGEI TVLINPFRFLHSGWPHG
Sequences:
>Translated_257_residues MAQPTAVRLFTSESVTEGHPDKICDAISDTILDALLEKDPQSRVAVETVVTTGIVHVVGEVRTSAYVEIPQLVRNKLIEI GFNSSEVGFDGRTCGVSVSIGEQSQEIADGVDNSDEARTNGDVEEDDRAGAGDQGLMFGYATNETEEYMPLPIALAHRLS RRLTQVRKEGIVPHLRPDGKTQVTFAYDAQDRPSHLDTVVISTQHDPEVDRAWLETQLREHVIDWVIKDAGIEDLATGEI TVLINPFRFLHSGWPHG >Mature_256_residues AQPTAVRLFTSESVTEGHPDKICDAISDTILDALLEKDPQSRVAVETVVTTGIVHVVGEVRTSAYVEIPQLVRNKLIEIG FNSSEVGFDGRTCGVSVSIGEQSQEIADGVDNSDEARTNGDVEEDDRAGAGDQGLMFGYATNETEEYMPLPIALAHRLSR RLTQVRKEGIVPHLRPDGKTQVTFAYDAQDRPSHLDTVVISTQHDPEVDRAWLETQLREHVIDWVIKDAGIEDLATGEIT VLINPFRFLHSGWPHG
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=223, Percent_Identity=51.1210762331839, Blast_Score=207, Evalue=8e-54, Organism=Homo sapiens, GI4557737, Length=226, Percent_Identity=48.6725663716814, Blast_Score=202, Evalue=2e-52, Organism=Escherichia coli, GI1789311, Length=252, Percent_Identity=49.6031746031746, Blast_Score=226, Evalue=9e-61, Organism=Caenorhabditis elegans, GI17538498, Length=257, Percent_Identity=46.3035019455253, Blast_Score=207, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17538494, Length=252, Percent_Identity=46.8253968253968, Blast_Score=207, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17551082, Length=252, Percent_Identity=46.8253968253968, Blast_Score=206, Evalue=7e-54, Organism=Caenorhabditis elegans, GI25145633, Length=252, Percent_Identity=45.2380952380952, Blast_Score=204, Evalue=5e-53, Organism=Caenorhabditis elegans, GI32565905, Length=252, Percent_Identity=40.0793650793651, Blast_Score=154, Evalue=5e-38, Organism=Caenorhabditis elegans, GI32565911, Length=207, Percent_Identity=42.0289855072464, Blast_Score=142, Evalue=1e-34, Organism=Caenorhabditis elegans, GI25145635, Length=207, Percent_Identity=40.0966183574879, Blast_Score=138, Evalue=2e-33, Organism=Caenorhabditis elegans, GI32565903, Length=180, Percent_Identity=42.2222222222222, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI32565909, Length=83, Percent_Identity=51.8072289156626, Blast_Score=93, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320710, Length=252, Percent_Identity=46.4285714285714, Blast_Score=207, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6323209, Length=252, Percent_Identity=45.6349206349206, Blast_Score=199, Evalue=3e-52, Organism=Drosophila melanogaster, GI45552159, Length=255, Percent_Identity=41.9607843137255, Blast_Score=184, Evalue=4e-47, Organism=Drosophila melanogaster, GI24580529, Length=255, Percent_Identity=41.9607843137255, Blast_Score=184, Evalue=4e-47, Organism=Drosophila melanogaster, GI24580537, Length=255, Percent_Identity=41.9607843137255, Blast_Score=184, Evalue=4e-47, Organism=Drosophila melanogaster, GI24580533, Length=255, Percent_Identity=41.9607843137255, Blast_Score=184, Evalue=4e-47, Organism=Drosophila melanogaster, GI24580535, Length=255, Percent_Identity=41.9607843137255, Blast_Score=184, Evalue=4e-47, Organism=Drosophila melanogaster, GI24580531, Length=255, Percent_Identity=41.9607843137255, Blast_Score=184, Evalue=4e-47, Organism=Drosophila melanogaster, GI24580527, Length=255, Percent_Identity=43.1372549019608, Blast_Score=183, Evalue=1e-46, Organism=Drosophila melanogaster, GI24580525, Length=255, Percent_Identity=43.1372549019608, Blast_Score=183, Evalue=1e-46, Organism=Drosophila melanogaster, GI24580541, Length=240, Percent_Identity=40.8333333333333, Blast_Score=160, Evalue=7e-40, Organism=Drosophila melanogaster, GI24580539, Length=129, Percent_Identity=48.8372093023256, Blast_Score=113, Evalue=2e-25,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 28281; Mature: 28150
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00376 ADOMET_SYNTHETASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPTAVRLFTSESVTEGHPDKICDAISDTILDALLEKDPQSRVAVETVVTTGIVHVVGE CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VRTSAYVEIPQLVRNKLIEIGFNSSEVGFDGRTCGVSVSIGEQSQEIADGVDNSDEARTN HHHHHHEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCC GDVEEDDRAGAGDQGLMFGYATNETEEYMPLPIALAHRLSRRLTQVRKEGIVPHLRPDGK CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TQVTFAYDAQDRPSHLDTVVISTQHDPEVDRAWLETQLREHVIDWVIKDAGIEDLATGEI EEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE TVLINPFRFLHSGWPHG EEEECCHHHHHCCCCCC >Mature Secondary Structure AQPTAVRLFTSESVTEGHPDKICDAISDTILDALLEKDPQSRVAVETVVTTGIVHVVGE CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VRTSAYVEIPQLVRNKLIEIGFNSSEVGFDGRTCGVSVSIGEQSQEIADGVDNSDEARTN HHHHHHEEHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCC GDVEEDDRAGAGDQGLMFGYATNETEEYMPLPIALAHRLSRRLTQVRKEGIVPHLRPDGK CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TQVTFAYDAQDRPSHLDTVVISTQHDPEVDRAWLETQLREHVIDWVIKDAGIEDLATGEI EEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE TVLINPFRFLHSGWPHG EEEECCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]