| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is hemK [H]
Identifier: 145295340
GI number: 145295340
Start: 1411276
End: 1412115
Strand: Direct
Name: hemK [H]
Synonym: cgR_1280
Alternate gene names: 145295340
Gene position: 1411276-1412115 (Clockwise)
Preceding gene: 145295339
Following gene: 145295341
Centisome position: 42.58
GC content: 58.57
Gene sequence:
>840_bases ATGCTGACCCTTGGGGAAGCTTTGCGTGACGCCACCGCCACCCTGGAAAGGGCGGGGGTGGCGTCGCCACTTGTGGACGC TCGTTTGATTGCGGCTCATTTGCTGGGTTGCGGTCCGCTCGATATTGCATTGCGCATGCGTGATGAGGTGCCGGCTGGGT TTGCGGCGGCGGTTGAGCGTCGTGCGCGACGCGAACCGCTGCAGCACATCTTGGGCACGGCACCCATGGGCCCGTTGGAT TTGCATGTGGGACCGGGCGTGTTCATTCCGCGCCCGGAAACCGAGGTGCTCGCGGACTGGGCCGTGCGGCAGGTGGCTGG CGACGTCGAAAAGCGAAAAATCGTTGACCTGTGCACCGGATCCGGCGCGCTTGCGGCCTACATCGGGCATGCGCTTATCG ACGCGACCCTCTACGCTGTCGAACTCGATCCGGGGGCAGCGACCTGGGCGCAGCGAAACTTCGATGAATTTGCACCGCAG GTGAAGCTCATCCACGGTGATGTAACAGATCCGACATTGTTGGCTGAGGTGCATGGCACGATCGATCTCGTTGTGTCAAA TCCGCCGTATGTGCCTGAATCTGATGATTTGGATCCAGAGGTCTACCAAGATCCACACATGGCGGTATTTAGTGGCGCTG ATGGCATGGATGTCATCAACAAGATGGTGCACCTGATCTTCAATTTGCTGAAATCTGGTGGGGCAGTGGGCATCGAACAT GACGACACCACTTCCGACGCCGTCCGCCAAGTTTTTTCTCAGCACGGGGGATTTGGCACTATTGAAGTGCTTCATGATCT CACCGGCAGAGCGCGTTTTGTTACAGCGCGTAAACTGTGA
Upstream 100 bases:
>100_bases GGCGAACAACCTTGATTCGGTTCTCGATGGTGAATTGGATGATCTGTTCACCGCGTTGCAGGCTGCTGAGCGTGCAGAAC GTCTTGAGGCCGAGGGCTAA
Downstream 100 bases:
>100_bases CTTTGAAAAATTTTTGAACAATCCGTACACCAACTCTAGGAGAAAAACAGTGAGCAGAATCTATGACTGTGCCGACCAAG ACTCCCGTGCAGCAGGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: M.MtuHHemKP [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MLTLGEALRDATATLERAGVASPLVDARLIAAHLLGCGPLDIALRMRDEVPAGFAAAVERRARREPLQHILGTAPMGPLD LHVGPGVFIPRPETEVLADWAVRQVAGDVEKRKIVDLCTGSGALAAYIGHALIDATLYAVELDPGAATWAQRNFDEFAPQ VKLIHGDVTDPTLLAEVHGTIDLVVSNPPYVPESDDLDPEVYQDPHMAVFSGADGMDVINKMVHLIFNLLKSGGAVGIEH DDTTSDAVRQVFSQHGGFGTIEVLHDLTGRARFVTARKL
Sequences:
>Translated_279_residues MLTLGEALRDATATLERAGVASPLVDARLIAAHLLGCGPLDIALRMRDEVPAGFAAAVERRARREPLQHILGTAPMGPLD LHVGPGVFIPRPETEVLADWAVRQVAGDVEKRKIVDLCTGSGALAAYIGHALIDATLYAVELDPGAATWAQRNFDEFAPQ VKLIHGDVTDPTLLAEVHGTIDLVVSNPPYVPESDDLDPEVYQDPHMAVFSGADGMDVINKMVHLIFNLLKSGGAVGIEH DDTTSDAVRQVFSQHGGFGTIEVLHDLTGRARFVTARKL >Mature_279_residues MLTLGEALRDATATLERAGVASPLVDARLIAAHLLGCGPLDIALRMRDEVPAGFAAAVERRARREPLQHILGTAPMGPLD LHVGPGVFIPRPETEVLADWAVRQVAGDVEKRKIVDLCTGSGALAAYIGHALIDATLYAVELDPGAATWAQRNFDEFAPQ VKLIHGDVTDPTLLAEVHGTIDLVVSNPPYVPESDDLDPEVYQDPHMAVFSGADGMDVINKMVHLIFNLLKSGGAVGIEH DDTTSDAVRQVFSQHGGFGTIEVLHDLTGRARFVTARKL
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=294, Percent_Identity=30.952380952381, Blast_Score=94, Evalue=1e-19, Organism=Escherichia coli, GI1787463, Length=279, Percent_Identity=31.5412186379928, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI87082085, Length=214, Percent_Identity=28.9719626168224, Blast_Score=68, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6324266, Length=195, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI24582226, Length=285, Percent_Identity=29.8245614035088, Blast_Score=87, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 29881; Mature: 29881
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLGEALRDATATLERAGVASPLVDARLIAAHLLGCGPLDIALRMRDEVPAGFAAAVER CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHEEECCCCCCHHHHHHHH RARREPLQHILGTAPMGPLDLHVGPGVFIPRPETEVLADWAVRQVAGDVEKRKIVDLCTG HHHHHHHHHHHCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC SGALAAYIGHALIDATLYAVELDPGAATWAQRNFDEFAPQVKLIHGDVTDPTLLAEVHGT CCHHHHHHHHHHHHHEEEEEEECCCCHHHHHCCHHHHCCEEEEEECCCCCCHHHHHHCCE IDLVVSNPPYVPESDDLDPEVYQDPHMAVFSGADGMDVINKMVHLIFNLLKSGGAVGIEH EEEEECCCCCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCC DDTTSDAVRQVFSQHGGFGTIEVLHDLTGRARFVTARKL CCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCC >Mature Secondary Structure MLTLGEALRDATATLERAGVASPLVDARLIAAHLLGCGPLDIALRMRDEVPAGFAAAVER CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHEEECCCCCCHHHHHHHH RARREPLQHILGTAPMGPLDLHVGPGVFIPRPETEVLADWAVRQVAGDVEKRKIVDLCTG HHHHHHHHHHHCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC SGALAAYIGHALIDATLYAVELDPGAATWAQRNFDEFAPQVKLIHGDVTDPTLLAEVHGT CCHHHHHHHHHHHHHEEEEEEECCCCHHHHHCCHHHHCCEEEEEECCCCCCHHHHHHCCE IDLVVSNPPYVPESDDLDPEVYQDPHMAVFSGADGMDVINKMVHLIFNLLKSGGAVGIEH EEEEECCCCCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCC DDTTSDAVRQVFSQHGGFGTIEVLHDLTGRARFVTARKL CCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]