| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145295279
Identifier: 145295279
GI number: 145295279
Start: 1327750
End: 1328277
Strand: Reverse
Name: 145295279
Synonym: cgR_1220
Alternate gene names: NA
Gene position: 1328277-1327750 (Counterclockwise)
Preceding gene: 145295282
Following gene: 145295275
Centisome position: 40.08
GC content: 59.66
Gene sequence:
>528_bases ATGTCGCTTGGGTGCTCTACACTTCCCACTATGATCAAACACCGAAACCGCCTAATGTCTTCCATCTACTCCGCAACTCG CTACGCCGCCCACTTCAAAAGCGTCTTCCCCACCGCCCTGGATGACATTCAATCCATGATGCGCCACCCTCGATCACTGG CCAGAGCCATACCCACGTGGCGTCCGCCGAGCATCCCGCTACCGTCACTTCCCGGCGAAGATCCCCTCACCCTCACCTTG TCACGTCACCGCGCAGGCCCCGCCGCCCGCCAAATCATCCGCGAGTTCGGTGAGCAACGTGAACCTGCCTATCTCATCAC CATCCGCATCACAAGCCCAGAGGGCTTCAAAGTATCCACCCGCCTCGCCGAAGGCTGGATCCGCGCAGTTCTCAGCACCG CGCACAGCGGCACTGTCCACCAGCTCACCGATGAGCCGGCACCGACGTTTTGCTGGCTTGTCGACGCCCACTTTGATCCG GTGCGTTCCCCTTCCTTCCTTTTCGAATATTCCAAAAGTGCAGCCTAG
Upstream 100 bases:
>100_bases TATTTTTTGAGTTAACATTTCACACCCAAGGCTAGCCCTGCGCCCCTTCTATATCTAGCTGACCAGTATTAATACCAATA ATAGAACATATTATCGAACA
Downstream 100 bases:
>100_bases AAAATGACGAAACCCTGGATTCCAAGAATCCAGGGCACCGCGACAAAGGCTAAAATCTAGTCTTCGTCATCATCCTCATC GTCCTCGTCATCATCGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSLGCSTLPTMIKHRNRLMSSIYSATRYAAHFKSVFPTALDDIQSMMRHPRSLARAIPTWRPPSIPLPSLPGEDPLTLTL SRHRAGPAARQIIREFGEQREPAYLITIRITSPEGFKVSTRLAEGWIRAVLSTAHSGTVHQLTDEPAPTFCWLVDAHFDP VRSPSFLFEYSKSAA
Sequences:
>Translated_175_residues MSLGCSTLPTMIKHRNRLMSSIYSATRYAAHFKSVFPTALDDIQSMMRHPRSLARAIPTWRPPSIPLPSLPGEDPLTLTL SRHRAGPAARQIIREFGEQREPAYLITIRITSPEGFKVSTRLAEGWIRAVLSTAHSGTVHQLTDEPAPTFCWLVDAHFDP VRSPSFLFEYSKSAA >Mature_174_residues SLGCSTLPTMIKHRNRLMSSIYSATRYAAHFKSVFPTALDDIQSMMRHPRSLARAIPTWRPPSIPLPSLPGEDPLTLTLS RHRAGPAARQIIREFGEQREPAYLITIRITSPEGFKVSTRLAEGWIRAVLSTAHSGTVHQLTDEPAPTFCWLVDAHFDPV RSPSFLFEYSKSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19570; Mature: 19439
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGCSTLPTMIKHRNRLMSSIYSATRYAAHFKSVFPTALDDIQSMMRHPRSLARAIPTW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RPPSIPLPSLPGEDPLTLTLSRHRAGPAARQIIREFGEQREPAYLITIRITSPEGFKVST CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHH RLAEGWIRAVLSTAHSGTVHQLTDEPAPTFCWLVDAHFDPVRSPSFLFEYSKSAA HHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure SLGCSTLPTMIKHRNRLMSSIYSATRYAAHFKSVFPTALDDIQSMMRHPRSLARAIPTW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RPPSIPLPSLPGEDPLTLTLSRHRAGPAARQIIREFGEQREPAYLITIRITSPEGFKVST CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHH RLAEGWIRAVLSTAHSGTVHQLTDEPAPTFCWLVDAHFDPVRSPSFLFEYSKSAA HHHHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA