| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is metG [H]
Identifier: 145295063
GI number: 145295063
Start: 1111388
End: 1113220
Strand: Direct
Name: metG [H]
Synonym: cgR_1006
Alternate gene names: 145295063
Gene position: 1111388-1113220 (Clockwise)
Preceding gene: 145295062
Following gene: 145295064
Centisome position: 33.53
GC content: 56.03
Gene sequence:
>1833_bases ATGACGAAGAACGTGCTCGTATCTGTTGCCTGGCCGTATGCCAACGGACCCCGTCACATTGGACATGTGGCGGGGTTTGG TGTCCCCTCCGATGTGTTCGCAAGGTTCCAGCGAATGTCTGGCAACAACGTGCTCATGGTGTCCGGCACCGATGAGCACG GCACGCCACTTCTGGTTCAAGCAGACAAAGAAGGCGTCACCGTTCAAGACCTCGCGGATAAGTACAACCGCCAGATCGTC GAAGACCTCACCGGCCTGGGCCTGTCCTATGACCTTTTCACCCGCACCACCACCTCCAACCACTACGCAGTAGTGCAGGA ACTGTTCCGTGGTCTGTACGACAACGGTTACATGATCAAGGAAACCACCCTCGGTGCGATTTCCCCATCCACTGGCCGTA CCCTGCCAGACCGCTACATTGAAGGCACCTGCCCAATCTGTGGCACCGACGGCGCTCGTGGCGACCAGTGCGACAACTGC GGAAACCAGCTCGATCCAGCGGACCTGATCAACCCGGTATCCAAGATCAACGGCGAAACCCCAGAGTTCGTTGAGACCGA ACACTTCCTGCTCGACCTGCCAGCACTAGCTGAAGCACTAACCGAGTGGCTGAAGGGACGCGAAGACTGGCGTCCAAACG TGTTGAAGTTCTCGCTCAACCTGCTGGACGATATCCGCCCACGCGCAATGTCCCGCGATATCGACTGGGGCATCCCAATC CCAGTTGAAGGATGGCAAGACAACAACGCCAAGAAGCTCTACGTTTGGTTTGACGCTGTCGTTGGCTACTTGTCCGCATC AATCGAATGGGCCTATCGCTCCGGCGACCCAGAAGCATGGCGCACCTTCTGGAATGATCCAGAAACCAAGTCCTACTACT TCATGGGCAAAGACAACATCACCTTCCACTCCCAGATCTGGCCAGCTGAACTTCTCGGCTACGCAGGTAAGGGCTCCCGA GGTGGAGAGATCGGCGACCTGGGTGTTCTGAACCTGCCTACTGAGGTTGTTTCCTCTGAGTTCCTGACTATGTCTGGATC CAAGTTCTCCTCATCCAAGGGCGTTGTCATCTACGTGAAGGACTTCCTCAAGGAGTTCGGCCCAGATGCGCTGCGATACT TCATCGCTGTCGCAGGCCCAGAAAACAACGACACCGACTTCACCTGGGATGAATTTGTCCGCCGCGTAAACAACGAGCTG GCAAACGGCTGGGGCAACCTGGTCAACCGTACTGTATCCATGGCGCACAAGAACTTCGGTGAAGTACCAGTACCTGGCGC ACTGGAAGAATCTGACAAGAAGATCCTTGATCTTGCTACCGCTGCCTTTGAATCCGTTGCTGCGAACCTGGATCAGTCCA AGTTCAAGGCCGGTATCTCTGAAATCATGCACGTTGTCGGTGAGGCCAACGCCTACATCGCAGAGCAAGAACCATGGAAG CTTGCCAAGGATGACACCAAGCGCGAGCGTCTTGCCACCGTGCTGTGGACCGCGCTGCAGGTTGTTTCTGACTGCAACAC CATGCTGACTCCATACCTGCCACACACTGCCCAAAAGGTTCATGAAACCTTGGGCCGTGATGGTATCTGGGCAGCATCAC CACAGATCGTGGAAGTCACCAACGAATCACCACGCCAGCCAATCGGTGTGGGCCTGCCAGATCCAGAGCACACCTACCCA GTAATCATGGGCGATTACAAGACCCAGCTGGCTAAGTGGCAGCGCATCGACGTTGTGCCAGGCACCACCTTGGAGAAGCC AGCACCGCTGATTGCTAAGCTCGATCCAGAACTTGGTGAAACCGGCCCAGAATGGGCACCAGTGCAGAACTAA
Upstream 100 bases:
>100_bases CGACGCAGGGAGCGTAAGGCGAGTGGTGCGGGGAAGCGTCGATAGGCAATTTTAACCCCTGATACCCCTTTCCGGCCGGG CATAAATTAAGGTGGTACGC
Downstream 100 bases:
>100_bases AGCATCTTTAGCATGAACCGAGCAGGTTGATCAGAAACATCTGATTGACCTGCTCTTATTAGTTGGCGGGGGTGGGGCGG CGAGTGCGTGTCCACCCCAT
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MTKNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPLLVQADKEGVTVQDLADKYNRQIV EDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLYDNGYMIKETTLGAISPSTGRTLPDRYIEGTCPICGTDGARGDQCDNC GNQLDPADLINPVSKINGETPEFVETEHFLLDLPALAEALTEWLKGREDWRPNVLKFSLNLLDDIRPRAMSRDIDWGIPI PVEGWQDNNAKKLYVWFDAVVGYLSASIEWAYRSGDPEAWRTFWNDPETKSYYFMGKDNITFHSQIWPAELLGYAGKGSR GGEIGDLGVLNLPTEVVSSEFLTMSGSKFSSSKGVVIYVKDFLKEFGPDALRYFIAVAGPENNDTDFTWDEFVRRVNNEL ANGWGNLVNRTVSMAHKNFGEVPVPGALEESDKKILDLATAAFESVAANLDQSKFKAGISEIMHVVGEANAYIAEQEPWK LAKDDTKRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETLGRDGIWAASPQIVEVTNESPRQPIGVGLPDPEHTYP VIMGDYKTQLAKWQRIDVVPGTTLEKPAPLIAKLDPELGETGPEWAPVQN
Sequences:
>Translated_610_residues MTKNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPLLVQADKEGVTVQDLADKYNRQIV EDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLYDNGYMIKETTLGAISPSTGRTLPDRYIEGTCPICGTDGARGDQCDNC GNQLDPADLINPVSKINGETPEFVETEHFLLDLPALAEALTEWLKGREDWRPNVLKFSLNLLDDIRPRAMSRDIDWGIPI PVEGWQDNNAKKLYVWFDAVVGYLSASIEWAYRSGDPEAWRTFWNDPETKSYYFMGKDNITFHSQIWPAELLGYAGKGSR GGEIGDLGVLNLPTEVVSSEFLTMSGSKFSSSKGVVIYVKDFLKEFGPDALRYFIAVAGPENNDTDFTWDEFVRRVNNEL ANGWGNLVNRTVSMAHKNFGEVPVPGALEESDKKILDLATAAFESVAANLDQSKFKAGISEIMHVVGEANAYIAEQEPWK LAKDDTKRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETLGRDGIWAASPQIVEVTNESPRQPIGVGLPDPEHTYP VIMGDYKTQLAKWQRIDVVPGTTLEKPAPLIAKLDPELGETGPEWAPVQN >Mature_609_residues TKNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPLLVQADKEGVTVQDLADKYNRQIVE DLTGLGLSYDLFTRTTTSNHYAVVQELFRGLYDNGYMIKETTLGAISPSTGRTLPDRYIEGTCPICGTDGARGDQCDNCG NQLDPADLINPVSKINGETPEFVETEHFLLDLPALAEALTEWLKGREDWRPNVLKFSLNLLDDIRPRAMSRDIDWGIPIP VEGWQDNNAKKLYVWFDAVVGYLSASIEWAYRSGDPEAWRTFWNDPETKSYYFMGKDNITFHSQIWPAELLGYAGKGSRG GEIGDLGVLNLPTEVVSSEFLTMSGSKFSSSKGVVIYVKDFLKEFGPDALRYFIAVAGPENNDTDFTWDEFVRRVNNELA NGWGNLVNRTVSMAHKNFGEVPVPGALEESDKKILDLATAAFESVAANLDQSKFKAGISEIMHVVGEANAYIAEQEPWKL AKDDTKRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETLGRDGIWAASPQIVEVTNESPRQPIGVGLPDPEHTYPV IMGDYKTQLAKWQRIDVVPGTTLEKPAPLIAKLDPELGETGPEWAPVQN
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI14043022, Length=531, Percent_Identity=33.3333333333333, Blast_Score=331, Evalue=2e-90, Organism=Homo sapiens, GI24308436, Length=539, Percent_Identity=25.974025974026, Blast_Score=162, Evalue=1e-39, Organism=Escherichia coli, GI1788432, Length=534, Percent_Identity=29.9625468164794, Blast_Score=275, Evalue=7e-75, Organism=Escherichia coli, GI1786861, Length=153, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17540794, Length=597, Percent_Identity=29.9832495812395, Blast_Score=294, Evalue=1e-79, Organism=Caenorhabditis elegans, GI212645096, Length=527, Percent_Identity=26.5654648956357, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI71992781, Length=363, Percent_Identity=26.4462809917355, Blast_Score=122, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6321704, Length=536, Percent_Identity=32.4626865671642, Blast_Score=306, Evalue=6e-84, Organism=Saccharomyces cerevisiae, GI6321610, Length=549, Percent_Identity=22.5865209471767, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI24655311, Length=529, Percent_Identity=32.5141776937618, Blast_Score=315, Evalue=4e-86, Organism=Drosophila melanogaster, GI21358483, Length=534, Percent_Identity=25.4681647940075, Blast_Score=144, Evalue=1e-34,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 67606; Mature: 67474
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPLLVQ CCCCEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEE ADKEGVTVQDLADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLYDNGYMIK CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHEEECCCCCHHHHHHHHHHHHCCCCEEEE ETTLGAISPSTGRTLPDRYIEGTCPICGTDGARGDQCDNCGNQLDPADLINPVSKINGET ECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC PEFVETEHFLLDLPALAEALTEWLKGREDWRPNVLKFSLNLLDDIRPRAMSRDIDWGIPI CCCCCCHHHEEECHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCHHHHCCCCCCCCCC PVEGWQDNNAKKLYVWFDAVVGYLSASIEWAYRSGDPEAWRTFWNDPETKSYYFMGKDNI CCCCCCCCCCCEEEEEHHHHHHHHHHHEEEEEECCCHHHHHHHCCCCCCCEEEEECCCCE TFHSQIWPAELLGYAGKGSRGGEIGDLGVLNLPTEVVSSEFLTMSGSKFSSSKGVVIYVK EEECCCCHHHHHCCCCCCCCCCCCCCCCEECCCHHHHCCHHEEECCCCCCCCCCEEEEHH DFLKEFGPDALRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAHKNFG HHHHHHCHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EVPVPGALEESDKKILDLATAAFESVAANLDQSKFKAGISEIMHVVGEANAYIAEQEPWK CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCC LAKDDTKRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETLGRDGIWAASPQIVEVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCEEEEC NESPRQPIGVGLPDPEHTYPVIMGDYKTQLAKWQRIDVVPGTTLEKPAPLIAKLDPELGE CCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHEEECCCCCCCCCCCCHHEECCCHHCC TGPEWAPVQN CCCCCCCCCC >Mature Secondary Structure TKNVLVSVAWPYANGPRHIGHVAGFGVPSDVFARFQRMSGNNVLMVSGTDEHGTPLLVQ CCCEEEEEECCCCCCCCHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEEE ADKEGVTVQDLADKYNRQIVEDLTGLGLSYDLFTRTTTSNHYAVVQELFRGLYDNGYMIK CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHEEECCCCCHHHHHHHHHHHHCCCCEEEE ETTLGAISPSTGRTLPDRYIEGTCPICGTDGARGDQCDNCGNQLDPADLINPVSKINGET ECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC PEFVETEHFLLDLPALAEALTEWLKGREDWRPNVLKFSLNLLDDIRPRAMSRDIDWGIPI CCCCCCHHHEEECHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCHHHHCCCCCCCCCC PVEGWQDNNAKKLYVWFDAVVGYLSASIEWAYRSGDPEAWRTFWNDPETKSYYFMGKDNI CCCCCCCCCCCEEEEEHHHHHHHHHHHEEEEEECCCHHHHHHHCCCCCCCEEEEECCCCE TFHSQIWPAELLGYAGKGSRGGEIGDLGVLNLPTEVVSSEFLTMSGSKFSSSKGVVIYVK EEECCCCHHHHHCCCCCCCCCCCCCCCCEECCCHHHHCCHHEEECCCCCCCCCCEEEEHH DFLKEFGPDALRYFIAVAGPENNDTDFTWDEFVRRVNNELANGWGNLVNRTVSMAHKNFG HHHHHHCHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EVPVPGALEESDKKILDLATAAFESVAANLDQSKFKAGISEIMHVVGEANAYIAEQEPWK CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCC LAKDDTKRERLATVLWTALQVVSDCNTMLTPYLPHTAQKVHETLGRDGIWAASPQIVEVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCEEEEC NESPRQPIGVGLPDPEHTYPVIMGDYKTQLAKWQRIDVVPGTTLEKPAPLIAKLDPELGE CCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHEEECCCCCCCCCCCCHHEECCCHHCC TGPEWAPVQN CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]