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The map label for this gene is recQ [H]

Identifier: 145295064

GI number: 145295064

Start: 1113338

End: 1115389

Strand: Direct

Name: recQ [H]

Synonym: cgR_1007

Alternate gene names: 145295064

Gene position: 1113338-1115389 (Clockwise)

Preceding gene: 145295063

Following gene: 145295066

Centisome position: 33.59

GC content: 53.27

Gene sequence:

>2052_bases
ATGAACGCAACGAGGGAAGAAGCCAACAACTTATTAGCTGGAATCGCCGGACCTGGCGCACAGCTCCGCGATGATCAATG
GGTAGCAATTGATGCATTGGTAAACCAACGCAAACGGATGCTGGTGGTGCAAAGGACCGGTTGGGGTAAATCAGCCGTCT
ACTTCATCGCCGCCAAACTGTTAAGAGCACGCGGTGCGGGCGCAGCCGTGATTATTTCTCCACTACTAGCCCTCATGCGT
AACCAGGTGGCGTCCGCCGAACGCGCCGGGATTAAGGCAGCGACACTCAACAGTGCCAACATGACGGAATGGGAAACCAT
CCAGCAGCAAGTCGTTTCAGGCGACGCCGATGTGCTGTTAATTTCACCTGAACGCCTCAACAACCCAGACTTTAGAGACA
CCATTTTGCCTCGACTAGCAGCTGAAACAGGCCTAGTGGTGGTCGATGAAGCCCACTGTATTTCCGACTGGGGTCACGAT
TTCCGCCCTGATTATCGCCGTATTCGAGATCTACTGGCTGGGCTATCACCAAATATTCCTGTGCTGGCTACTACAGCAAC
AGCTAATGACCGCGTGGTAGAAGATGTCCGTGCCCAACTAGGAGACGGCACAGGTTTGCTTCGTGGTGGACTAGACCGTG
AATCCCTTTACCTATCCGTGGTGAACCTGCCCAACCCCACCGAACGACCAGCTTGGCTTGCCACCCACCTCAAGGATTTG
ACTGGTTCGGGCATCATTTACTGCCTCACCGTATCTGCTGCACATGATCTTGCCGATGCACTTAATTCTGTTGGATGGAA
TGTTGCCGCCTACACCGGTCGAACCGAAGCAGGAGAGCGCGAACGTTTAGAACATGCCTTGATCAACAACGAGATCAAAG
CACTAGTAGCAACCTCTGCACTGGGAATGGGCTTTGACAAACCAGACCTTGGTTTTGTTTTGCACATGGGCAGCCCCAGC
TCACCGGTGTCTTATTACCAGCAGATTGGTCGCGCCGGGCGCGGCACCGCTCGTGCCGATGTCATCCTGCTGCCAGGAAC
TGAAGACAAAGAGATCTGGGAGTACTTTGCATCAGTATCGTTCCCACGCGAAGAGGTAGTCCGCCAACTGCTTTCGGTGT
TAACCGATGAGGCGCAATCCACTGTCAAATTGGAATCACAAGTAGATCTTTCCCGATCACGCCTTGAACAAGTACTTAAA
GTGCTAGACGTAGATGGCGCAGTCAAACGTGTACGTGGCGGATGGGTCTCCACCGGGCAAGAGTGGATCTACGATGCGGA
ACGCTACGCAGGGCTTGAACAAGCAAGGAAAATTGAACAGCAAAGCATGGTGAACTACCAGAACACCATTGAGTGCCGCA
TGCTGTACCTCCGCAAAGAACTAGACGATGTGGAGGCAACTACTCCGTGCGGGCGCTGTGACAATTGCACGGGCAAAACG
TGGGGGCTCGACACCGATGCCTCGATCACTTTGAAAGTGGACCAACAGCTTCAAACACCCGGAGTGAAAATAGCCCCACG
AAAAATGTGGCCGACTGGCATTAGTGTCAGAGGAAAAATCGCAGGGCTAGAAGAAGGACGAGCACTGGGACGACTCAATG
ACATTGCCCGTGGACCTGCACTAAAGGCCCTGCTGGACAGCGGAGCTTATTCTGATGATCCATGGATGGCACGCATCATC
GAAGTGCTGAAAAACTGGGGTTGGACCAACCGGCCTGCCAACGTGGTCGCGCTCGGCAATACCAACTTTGGATCAACTGA
GATGATCATCCAGGTAGCTCAATCAATCGCAGCGGTGGGACGAATGAACTTTGCGGGTGTACTTCCAGTCCTGCCTGGTG
CTGAAGAAGTCATGGCTCAGAATTCCGCATACCGAGTAGAAGCCCTATTGAAACAATGGGACTGGTCGAAAGGCTTGCAA
CTAGTTCCCGGTCCCATTTTGCTGGTGACAGACCTTATTGATACTGGCTGGTCGGTGACAGTTGCAGGAAATGGCATTGC
GCAGCGGACCTCAGAGAAGGTGCTGCCGTTCGCTTTAGCGAGTAGGGGATAG

Upstream 100 bases:

>100_bases
CCGAGCAGGTTGATCAGAAACATCTGATTGACCTGCTCTTATTAGTTGGCGGGGGTGGGGCGGCGAGTGCGTGTCCACCC
CATGGTGTTAGGTGGAAGGC

Downstream 100 bases:

>100_bases
GTGCTCTGGGACGAGAGCAATTGGACGCACTGGAAAACTAGCTCCACCTTTTGGAATTGGCCAAGGACAAGCAATCATCG
CACTCGTTGCAGGAACCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 683; Mature: 683

Protein sequence:

>683_residues
MNATREEANNLLAGIAGPGAQLRDDQWVAIDALVNQRKRMLVVQRTGWGKSAVYFIAAKLLRARGAGAAVIISPLLALMR
NQVASAERAGIKAATLNSANMTEWETIQQQVVSGDADVLLISPERLNNPDFRDTILPRLAAETGLVVVDEAHCISDWGHD
FRPDYRRIRDLLAGLSPNIPVLATTATANDRVVEDVRAQLGDGTGLLRGGLDRESLYLSVVNLPNPTERPAWLATHLKDL
TGSGIIYCLTVSAAHDLADALNSVGWNVAAYTGRTEAGERERLEHALINNEIKALVATSALGMGFDKPDLGFVLHMGSPS
SPVSYYQQIGRAGRGTARADVILLPGTEDKEIWEYFASVSFPREEVVRQLLSVLTDEAQSTVKLESQVDLSRSRLEQVLK
VLDVDGAVKRVRGGWVSTGQEWIYDAERYAGLEQARKIEQQSMVNYQNTIECRMLYLRKELDDVEATTPCGRCDNCTGKT
WGLDTDASITLKVDQQLQTPGVKIAPRKMWPTGISVRGKIAGLEEGRALGRLNDIARGPALKALLDSGAYSDDPWMARII
EVLKNWGWTNRPANVVALGNTNFGSTEMIIQVAQSIAAVGRMNFAGVLPVLPGAEEVMAQNSAYRVEALLKQWDWSKGLQ
LVPGPILLVTDLIDTGWSVTVAGNGIAQRTSEKVLPFALASRG

Sequences:

>Translated_683_residues
MNATREEANNLLAGIAGPGAQLRDDQWVAIDALVNQRKRMLVVQRTGWGKSAVYFIAAKLLRARGAGAAVIISPLLALMR
NQVASAERAGIKAATLNSANMTEWETIQQQVVSGDADVLLISPERLNNPDFRDTILPRLAAETGLVVVDEAHCISDWGHD
FRPDYRRIRDLLAGLSPNIPVLATTATANDRVVEDVRAQLGDGTGLLRGGLDRESLYLSVVNLPNPTERPAWLATHLKDL
TGSGIIYCLTVSAAHDLADALNSVGWNVAAYTGRTEAGERERLEHALINNEIKALVATSALGMGFDKPDLGFVLHMGSPS
SPVSYYQQIGRAGRGTARADVILLPGTEDKEIWEYFASVSFPREEVVRQLLSVLTDEAQSTVKLESQVDLSRSRLEQVLK
VLDVDGAVKRVRGGWVSTGQEWIYDAERYAGLEQARKIEQQSMVNYQNTIECRMLYLRKELDDVEATTPCGRCDNCTGKT
WGLDTDASITLKVDQQLQTPGVKIAPRKMWPTGISVRGKIAGLEEGRALGRLNDIARGPALKALLDSGAYSDDPWMARII
EVLKNWGWTNRPANVVALGNTNFGSTEMIIQVAQSIAAVGRMNFAGVLPVLPGAEEVMAQNSAYRVEALLKQWDWSKGLQ
LVPGPILLVTDLIDTGWSVTVAGNGIAQRTSEKVLPFALASRG
>Mature_683_residues
MNATREEANNLLAGIAGPGAQLRDDQWVAIDALVNQRKRMLVVQRTGWGKSAVYFIAAKLLRARGAGAAVIISPLLALMR
NQVASAERAGIKAATLNSANMTEWETIQQQVVSGDADVLLISPERLNNPDFRDTILPRLAAETGLVVVDEAHCISDWGHD
FRPDYRRIRDLLAGLSPNIPVLATTATANDRVVEDVRAQLGDGTGLLRGGLDRESLYLSVVNLPNPTERPAWLATHLKDL
TGSGIIYCLTVSAAHDLADALNSVGWNVAAYTGRTEAGERERLEHALINNEIKALVATSALGMGFDKPDLGFVLHMGSPS
SPVSYYQQIGRAGRGTARADVILLPGTEDKEIWEYFASVSFPREEVVRQLLSVLTDEAQSTVKLESQVDLSRSRLEQVLK
VLDVDGAVKRVRGGWVSTGQEWIYDAERYAGLEQARKIEQQSMVNYQNTIECRMLYLRKELDDVEATTPCGRCDNCTGKT
WGLDTDASITLKVDQQLQTPGVKIAPRKMWPTGISVRGKIAGLEEGRALGRLNDIARGPALKALLDSGAYSDDPWMARII
EVLKNWGWTNRPANVVALGNTNFGSTEMIIQVAQSIAAVGRMNFAGVLPVLPGAEEVMAQNSAYRVEALLKQWDWSKGLQ
LVPGPILLVTDLIDTGWSVTVAGNGIAQRTSEKVLPFALASRG

Specific function: DNA helicase [H]

COG id: COG0514

COG function: function code L; Superfamily II DNA helicase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HRDC domain [H]

Homologues:

Organism=Homo sapiens, GI14591902, Length=325, Percent_Identity=32.9230769230769, Blast_Score=167, Evalue=4e-41,
Organism=Homo sapiens, GI14591904, Length=325, Percent_Identity=32.9230769230769, Blast_Score=167, Evalue=4e-41,
Organism=Homo sapiens, GI169218196, Length=317, Percent_Identity=32.807570977918, Blast_Score=162, Evalue=1e-39,
Organism=Homo sapiens, GI110735439, Length=317, Percent_Identity=32.807570977918, Blast_Score=162, Evalue=1e-39,
Organism=Homo sapiens, GI4557365, Length=344, Percent_Identity=33.7209302325581, Blast_Score=155, Evalue=2e-37,
Organism=Homo sapiens, GI51242943, Length=328, Percent_Identity=32.9268292682927, Blast_Score=150, Evalue=6e-36,
Organism=Homo sapiens, GI51242947, Length=328, Percent_Identity=32.9268292682927, Blast_Score=149, Evalue=7e-36,
Organism=Homo sapiens, GI148612816, Length=324, Percent_Identity=33.3333333333333, Blast_Score=147, Evalue=2e-35,
Organism=Homo sapiens, GI284005309, Length=332, Percent_Identity=32.2289156626506, Blast_Score=127, Evalue=5e-29,
Organism=Homo sapiens, GI45446747, Length=324, Percent_Identity=25, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI45446743, Length=324, Percent_Identity=25, Blast_Score=69, Evalue=2e-11,
Organism=Escherichia coli, GI48994977, Length=328, Percent_Identity=36.890243902439, Blast_Score=179, Evalue=5e-46,
Organism=Escherichia coli, GI1787016, Length=364, Percent_Identity=25.2747252747253, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71987997, Length=335, Percent_Identity=33.7313432835821, Blast_Score=171, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI71987993, Length=336, Percent_Identity=34.2261904761905, Blast_Score=171, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI32564293, Length=382, Percent_Identity=32.1989528795811, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17552866, Length=364, Percent_Identity=31.043956043956, Blast_Score=156, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI25145561, Length=325, Percent_Identity=32, Blast_Score=149, Evalue=5e-36,
Organism=Saccharomyces cerevisiae, GI6323844, Length=321, Percent_Identity=34.5794392523364, Blast_Score=176, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24646066, Length=326, Percent_Identity=34.0490797546012, Blast_Score=151, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24664230, Length=325, Percent_Identity=31.0769230769231, Blast_Score=142, Evalue=6e-34,
Organism=Drosophila melanogaster, GI62472181, Length=325, Percent_Identity=31.0769230769231, Blast_Score=142, Evalue=6e-34,
Organism=Drosophila melanogaster, GI24664226, Length=325, Percent_Identity=31.3846153846154, Blast_Score=142, Evalue=7e-34,
Organism=Drosophila melanogaster, GI21358123, Length=365, Percent_Identity=32.0547945205479, Blast_Score=127, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24662330, Length=329, Percent_Identity=23.4042553191489, Blast_Score=71, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR004589
- InterPro:   IPR006293
- InterPro:   IPR002121
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010997
- InterPro:   IPR018982 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF00570 HRDC; PF09382 RQC [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 74362; Mature: 74362

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS00690 DEAH_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATREEANNLLAGIAGPGAQLRDDQWVAIDALVNQRKRMLVVQRTGWGKSAVYFIAAKL
CCCCHHHHHHHEEECCCCCCCCCCCCEEEHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH
LRARGAGAAVIISPLLALMRNQVASAERAGIKAATLNSANMTEWETIQQQVVSGDADVLL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEE
ISPERLNNPDFRDTILPRLAAETGLVVVDEAHCISDWGHDFRPDYRRIRDLLAGLSPNIP
ECHHHCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
VLATTATANDRVVEDVRAQLGDGTGLLRGGLDRESLYLSVVNLPNPTERPAWLATHLKDL
EEEEECCCCHHHHHHHHHHHCCCCCHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHC
TGSGIIYCLTVSAAHDLADALNSVGWNVAAYTGRTEAGERERLEHALINNEIKALVATSA
CCCCEEEEEEEHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LGMGFDKPDLGFVLHMGSPSSPVSYYQQIGRAGRGTARADVILLPGTEDKEIWEYFASVS
HCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCC
FPREEVVRQLLSVLTDEAQSTVKLESQVDLSRSRLEQVLKVLDVDGAVKRVRGGWVSTGQ
CCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCH
EWIYDAERYAGLEQARKIEQQSMVNYQNTIECRMLYLRKELDDVEATTPCGRCDNCTGKT
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
WGLDTDASITLKVDQQLQTPGVKIAPRKMWPTGISVRGKIAGLEEGRALGRLNDIARGPA
CCCCCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCHH
LKALLDSGAYSDDPWMARIIEVLKNWGWTNRPANVVALGNTNFGSTEMIIQVAQSIAAVG
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
RMNFAGVLPVLPGAEEVMAQNSAYRVEALLKQWDWSKGLQLVPGPILLVTDLIDTGWSVT
CCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCCCEEEEHHHHCCCEEE
VAGNGIAQRTSEKVLPFALASRG
EECCCHHHHHHCCCCCHHHCCCC
>Mature Secondary Structure
MNATREEANNLLAGIAGPGAQLRDDQWVAIDALVNQRKRMLVVQRTGWGKSAVYFIAAKL
CCCCHHHHHHHEEECCCCCCCCCCCCEEEHHHHHCCCCEEEEEEECCCCCHHHHHHHHHH
LRARGAGAAVIISPLLALMRNQVASAERAGIKAATLNSANMTEWETIQQQVVSGDADVLL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEE
ISPERLNNPDFRDTILPRLAAETGLVVVDEAHCISDWGHDFRPDYRRIRDLLAGLSPNIP
ECHHHCCCCCHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHCCCCCCC
VLATTATANDRVVEDVRAQLGDGTGLLRGGLDRESLYLSVVNLPNPTERPAWLATHLKDL
EEEEECCCCHHHHHHHHHHHCCCCCHHCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHC
TGSGIIYCLTVSAAHDLADALNSVGWNVAAYTGRTEAGERERLEHALINNEIKALVATSA
CCCCEEEEEEEHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LGMGFDKPDLGFVLHMGSPSSPVSYYQQIGRAGRGTARADVILLPGTEDKEIWEYFASVS
HCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCC
FPREEVVRQLLSVLTDEAQSTVKLESQVDLSRSRLEQVLKVLDVDGAVKRVRGGWVSTGQ
CCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCH
EWIYDAERYAGLEQARKIEQQSMVNYQNTIECRMLYLRKELDDVEATTPCGRCDNCTGKT
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
WGLDTDASITLKVDQQLQTPGVKIAPRKMWPTGISVRGKIAGLEEGRALGRLNDIARGPA
CCCCCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCHH
LKALLDSGAYSDDPWMARIIEVLKNWGWTNRPANVVALGNTNFGSTEMIIQVAQSIAAVG
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHH
RMNFAGVLPVLPGAEEVMAQNSAYRVEALLKQWDWSKGLQLVPGPILLVTDLIDTGWSVT
CCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCEECCCCCEEEEHHHHCCCEEE
VAGNGIAQRTSEKVLPFALASRG
EECCCHHHHHHCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]