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The map label for this gene is yycH [H]

Identifier: 138897042

GI number: 138897042

Start: 3519284

End: 3520624

Strand: Reverse

Name: yycH [H]

Synonym: GTNG_3413

Alternate gene names: 138897042

Gene position: 3520624-3519284 (Counterclockwise)

Preceding gene: 138897043

Following gene: 138897041

Centisome position: 99.16

GC content: 43.62

Gene sequence:

>1341_bases
ATGACTGGTACAATGTATGAGCAGATTAAAACAGTCGTGTTGACGGTGCTCGTGCTGATCAGCATTACGTTGACGTTTGT
TTTATGGACATACTATCCGAAATATGATGTGCTGCAAAACGATGATTATATTCAGCACGTTTCCGTGAGCAATACACAAG
TCGATACGGCGATGGTCGTGCAGCCCAAACAGATGATTATCCATAAAAACGGTGCCCACTATGCCGTGACGAAAGAAGAA
GAGAAAAATGAAGTGTTGAAAGAAATAAAAAAATGGACGCTTGACGACTTCGAAAACATTTCGTCTTCTGTTCCGGCAGG
AAAGTTTTTTACGTTTTTAAATGGCAAGGAGCGGCTGGAAATTATTTATCCAGACGAAATCCCCATTGACATATACCGAT
TAATTTTCACTGTAGATGATAAAGGATTGGACGATTTGTCATTCGACCGTATTCTCGTTCCACTTGAAGGAGACGATGAG
TTTCCAGTGTATTTTATGGCAACGGACAAGCAAAAAATTTATAAAGCGGTTGCTAGTGACGCTTCGCTGGTGGCAATCAG
ACGGCTGACGAAAGAAACAAACCATTTTGCCCGTTATTTTGCATATCCAGTCAGCGAGACGAAACAGCTTTACTTGCCGG
AAAGCGAAGTGGCGCTCAGTAGCTTGCAATACTATACCGATGAATTAGATGTCGATAAATTTAAAGAGGCGCTTTTTAGC
GATCCGAGTTTTGTTAAAAAAGACTTGATTCCGTTTGGTGAAGAATATACCGATGGTTCACGGCTGATGAACGTTGATTT
TCTCCAACGAACGCTGTTGTATGTCAATCCAGCAGCGCGCGCCTCGGATATGAGTCAAACCAAATCGGAAACTCATCTCA
TTCAAAAAAGCATCAATTTTGTCAATGAACATGGTGGATGGACCGATCTGTACCATTTTGTCCGCTGGAGTGAAGAGGAC
CGGAAAATCATTTTCCGCCTTGTTGTGAACGGCTATCCGGTTTTTAACGAATATGGCATGTCAGAAATTGTGGAAACATG
GGGAGCAAGCGATTTAATGAAGTACCAGCGCCCGCTGTTCCGCCTTGAAATTGATGACCGTAACCGTACACCGACAACGT
TGCCGTCCGGCCGAGATATTGTCAAACAGATCGAAGCAATGAAAGACGTCCGTAAAGCGCTCGTGAAAGATATTGCCATC
GGCTATGAGCTCATCAAAGATCCAGAACGGGAAAAGGTGATCCGTCTTGAACCGGCATGGTTTTATTTGTATGGGCAAAC
GTGGAAAAAAGTGAGTGTCGGTAGAGAGAGCAGAGGAGGGGGAACCAATGGATTGGAGTAA

Upstream 100 bases:

>100_bases
GAATTGGTGATCGCCCACGGTGGGACAATTTGGGCGGAAAGCAAAGAACATAAAGGGACGACGATTTACTTTACGTTGCC
ATTAGAACGAGAACAAAAGG

Downstream 100 bases:

>100_bases
AACGAAGACGATTTTTATTATTGTGTTCCTCATCCTTGATTGTTTTTTAATTTATCAGTTTATGGAGAAACGAAACAGCA
GTCAGCTTGACGTTATTTTA

Product: YycH protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MTGTMYEQIKTVVLTVLVLISITLTFVLWTYYPKYDVLQNDDYIQHVSVSNTQVDTAMVVQPKQMIIHKNGAHYAVTKEE
EKNEVLKEIKKWTLDDFENISSSVPAGKFFTFLNGKERLEIIYPDEIPIDIYRLIFTVDDKGLDDLSFDRILVPLEGDDE
FPVYFMATDKQKIYKAVASDASLVAIRRLTKETNHFARYFAYPVSETKQLYLPESEVALSSLQYYTDELDVDKFKEALFS
DPSFVKKDLIPFGEEYTDGSRLMNVDFLQRTLLYVNPAARASDMSQTKSETHLIQKSINFVNEHGGWTDLYHFVRWSEED
RKIIFRLVVNGYPVFNEYGMSEIVETWGASDLMKYQRPLFRLEIDDRNRTPTTLPSGRDIVKQIEAMKDVRKALVKDIAI
GYELIKDPEREKVIRLEPAWFYLYGQTWKKVSVGRESRGGGTNGLE

Sequences:

>Translated_446_residues
MTGTMYEQIKTVVLTVLVLISITLTFVLWTYYPKYDVLQNDDYIQHVSVSNTQVDTAMVVQPKQMIIHKNGAHYAVTKEE
EKNEVLKEIKKWTLDDFENISSSVPAGKFFTFLNGKERLEIIYPDEIPIDIYRLIFTVDDKGLDDLSFDRILVPLEGDDE
FPVYFMATDKQKIYKAVASDASLVAIRRLTKETNHFARYFAYPVSETKQLYLPESEVALSSLQYYTDELDVDKFKEALFS
DPSFVKKDLIPFGEEYTDGSRLMNVDFLQRTLLYVNPAARASDMSQTKSETHLIQKSINFVNEHGGWTDLYHFVRWSEED
RKIIFRLVVNGYPVFNEYGMSEIVETWGASDLMKYQRPLFRLEIDDRNRTPTTLPSGRDIVKQIEAMKDVRKALVKDIAI
GYELIKDPEREKVIRLEPAWFYLYGQTWKKVSVGRESRGGGTNGLE
>Mature_445_residues
TGTMYEQIKTVVLTVLVLISITLTFVLWTYYPKYDVLQNDDYIQHVSVSNTQVDTAMVVQPKQMIIHKNGAHYAVTKEEE
KNEVLKEIKKWTLDDFENISSSVPAGKFFTFLNGKERLEIIYPDEIPIDIYRLIFTVDDKGLDDLSFDRILVPLEGDDEF
PVYFMATDKQKIYKAVASDASLVAIRRLTKETNHFARYFAYPVSETKQLYLPESEVALSSLQYYTDELDVDKFKEALFSD
PSFVKKDLIPFGEEYTDGSRLMNVDFLQRTLLYVNPAARASDMSQTKSETHLIQKSINFVNEHGGWTDLYHFVRWSEEDR
KIIFRLVVNGYPVFNEYGMSEIVETWGASDLMKYQRPLFRLEIDDRNRTPTTLPSGRDIVKQIEAMKDVRKALVKDIAIG
YELIKDPEREKVIRLEPAWFYLYGQTWKKVSVGRESRGGGTNGLE

Specific function: Together with yycI, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4863

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009996 [H]

Pfam domain/function: PF07435 YycH [H]

EC number: NA

Molecular weight: Translated: 51703; Mature: 51572

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTMYEQIKTVVLTVLVLISITLTFVLWTYYPKYDVLQNDDYIQHVSVSNTQVDTAMVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEE
QPKQMIIHKNGAHYAVTKEEEKNEVLKEIKKWTLDDFENISSSVPAGKFFTFLNGKERLE
CCHHHEEECCCCEEEEECCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCEEE
IIYPDEIPIDIYRLIFTVDDKGLDDLSFDRILVPLEGDDEFPVYFMATDKQKIYKAVASD
EECCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHCC
ASLVAIRRLTKETNHFARYFAYPVSETKQLYLPESEVALSSLQYYTDELDVDKFKEALFS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCC
DPSFVKKDLIPFGEEYTDGSRLMNVDFLQRTLLYVNPAARASDMSQTKSETHLIQKSINF
CHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VNEHGGWTDLYHFVRWSEEDRKIIFRLVVNGYPVFNEYGMSEIVETWGASDLMKYQRPLF
HHCCCCHHHHHHHHHCCCCHHHEEEHHHHCCCCCHHHCCHHHHHHHHCHHHHHHHCCCEE
RLEIDDRNRTPTTLPSGRDIVKQIEAMKDVRKALVKDIAIGYELIKDPEREKVIRLEPAW
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEE
FYLYGQTWKKVSVGRESRGGGTNGLE
EEEECCCHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGTMYEQIKTVVLTVLVLISITLTFVLWTYYPKYDVLQNDDYIQHVSVSNTQVDTAMVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEE
QPKQMIIHKNGAHYAVTKEEEKNEVLKEIKKWTLDDFENISSSVPAGKFFTFLNGKERLE
CCHHHEEECCCCEEEEECCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEECCCCEEE
IIYPDEIPIDIYRLIFTVDDKGLDDLSFDRILVPLEGDDEFPVYFMATDKQKIYKAVASD
EECCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHHHHCC
ASLVAIRRLTKETNHFARYFAYPVSETKQLYLPESEVALSSLQYYTDELDVDKFKEALFS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHCCCCHHHHHHHHCC
DPSFVKKDLIPFGEEYTDGSRLMNVDFLQRTLLYVNPAARASDMSQTKSETHLIQKSINF
CHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VNEHGGWTDLYHFVRWSEEDRKIIFRLVVNGYPVFNEYGMSEIVETWGASDLMKYQRPLF
HHCCCCHHHHHHHHHCCCCHHHEEEHHHHCCCCCHHHCCHHHHHHHHCHHHHHHHCCCEE
RLEIDDRNRTPTTLPSGRDIVKQIEAMKDVRKALVKDIAIGYELIKDPEREKVIRLEPAW
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCEE
FYLYGQTWKKVSVGRESRGGGTNGLE
EEEECCCHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]