Click here to switch to the map view.

The map label for this gene is yycI [H]

Identifier: 138897041

GI number: 138897041

Start: 3518515

End: 3519297

Strand: Reverse

Name: yycI [H]

Synonym: GTNG_3412

Alternate gene names: 138897041

Gene position: 3519297-3518515 (Counterclockwise)

Preceding gene: 138897042

Following gene: 138897040

Centisome position: 99.13

GC content: 41.89

Gene sequence:

>783_bases
ATGGATTGGAGTAAAACGAAGACGATTTTTATTATTGTGTTCCTCATCCTTGATTGTTTTTTAATTTATCAGTTTATGGA
GAAACGAAACAGCAGTCAGCTTGACGTTATTTTAGAAACGACGATTGAAGAACAGCTCGAAGCGAACGGCATTACATATG
TCGATTTGCCAAAAGAAGTGACAAAAGCGGTGTATGTTAGCGGTAAAAGTCGGTCGTTTACTAGTGCCGATACGAAAAAA
CTATCCGGACAAAAGGTAGAAATTGAAGGAGAAACAAAGTTGAAAGGGACGTTCACTCATCCGGTCGCTTTCAACTTCGA
AGATCAGTACCAACTGAGCGAGTTTTTACAGCGGCACATCTTAAATGGGGAACAATATGCCTTTTGGTCATTTGACAAAA
AGAAAGGTACAGTGATTTGCTACCAAGTATATGACGGGAAAATGATTTATGACAACGAAAACAGCAAGCTTGTCATCCAC
GTCAATGAGCAAAAAGAGGCGCTTTCCTACGAACAGACGATGCTCGTTGACTTGGAAAAATACGAACGGAAACAGGATGT
CGTTCCGGCCATTAAGGCGATTGAGACGCTGTATCGAAGAGGACATTTGCAGCCAGGGGATCACGTCACTAGAATCGAGC
TTGGCTATTATGGACTTGTCCAATTTACTGCCTCGCAAGTGTTGACACCGACATGGCATATCGTGGTCAACCGGAAAAAA
GACTATTTTGTCAACGCGTTTGAAGGGCAAGTCATTAATGATCAAGGAAATGTGTTGGAGTGA

Upstream 100 bases:

>100_bases
CGGGAAAAGGTGATCCGTCTTGAACCGGCATGGTTTTATTTGTATGGGCAAACGTGGAAAAAAGTGAGTGTCGGTAGAGA
GAGCAGAGGAGGGGGAACCA

Downstream 100 bases:

>100_bases
AAACAAATGACAATGCGATTTAGTGTACTAGCAAGCGGCAGTACTGGCAACGCCTTTTACATCGAAACAGACAGCCAGCG
CCTGCTTGTCGATGCCGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDWSKTKTIFIIVFLILDCFLIYQFMEKRNSSQLDVILETTIEEQLEANGITYVDLPKEVTKAVYVSGKSRSFTSADTKK
LSGQKVEIEGETKLKGTFTHPVAFNFEDQYQLSEFLQRHILNGEQYAFWSFDKKKGTVICYQVYDGKMIYDNENSKLVIH
VNEQKEALSYEQTMLVDLEKYERKQDVVPAIKAIETLYRRGHLQPGDHVTRIELGYYGLVQFTASQVLTPTWHIVVNRKK
DYFVNAFEGQVINDQGNVLE

Sequences:

>Translated_260_residues
MDWSKTKTIFIIVFLILDCFLIYQFMEKRNSSQLDVILETTIEEQLEANGITYVDLPKEVTKAVYVSGKSRSFTSADTKK
LSGQKVEIEGETKLKGTFTHPVAFNFEDQYQLSEFLQRHILNGEQYAFWSFDKKKGTVICYQVYDGKMIYDNENSKLVIH
VNEQKEALSYEQTMLVDLEKYERKQDVVPAIKAIETLYRRGHLQPGDHVTRIELGYYGLVQFTASQVLTPTWHIVVNRKK
DYFVNAFEGQVINDQGNVLE
>Mature_260_residues
MDWSKTKTIFIIVFLILDCFLIYQFMEKRNSSQLDVILETTIEEQLEANGITYVDLPKEVTKAVYVSGKSRSFTSADTKK
LSGQKVEIEGETKLKGTFTHPVAFNFEDQYQLSEFLQRHILNGEQYAFWSFDKKKGTVICYQVYDGKMIYDNENSKLVIH
VNEQKEALSYEQTMLVDLEKYERKQDVVPAIKAIETLYRRGHLQPGDHVTRIELGYYGLVQFTASQVLTPTWHIVVNRKK
DYFVNAFEGQVINDQGNVLE

Specific function: Together with yycH, regulates the activity of the two- component system yycF/yycG [H]

COG id: COG4853

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018604 [H]

Pfam domain/function: PF09648 YycI [H]

EC number: NA

Molecular weight: Translated: 30184; Mature: 30184

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWSKTKTIFIIVFLILDCFLIYQFMEKRNSSQLDVILETTIEEQLEANGITYVDLPKEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCEEEECCHHH
TKAVYVSGKSRSFTSADTKKLSGQKVEIEGETKLKGTFTHPVAFNFEDQYQLSEFLQRHI
HHEEEECCCCCCCCCCCHHHCCCCEEEECCCCEEEEEEECCEEECCCCHHHHHHHHHHHH
LNGEQYAFWSFDKKKGTVICYQVYDGKMIYDNENSKLVIHVNEQKEALSYEQTMLVDLEK
CCCCEEEEEEECCCCCCEEEEEEECCEEEEECCCCEEEEEECCCHHHHHHHHHHEEEHHH
YERKQDVVPAIKAIETLYRRGHLQPGDHVTRIELGYYGLVQFTASQVLTPTWHIVVNRKK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEHEEEHHHHHCCCEEEEEEECCC
DYFVNAFEGQVINDQGNVLE
CEEEEEECCEEECCCCCCCC
>Mature Secondary Structure
MDWSKTKTIFIIVFLILDCFLIYQFMEKRNSSQLDVILETTIEEQLEANGITYVDLPKEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCEEEECCHHH
TKAVYVSGKSRSFTSADTKKLSGQKVEIEGETKLKGTFTHPVAFNFEDQYQLSEFLQRHI
HHEEEECCCCCCCCCCCHHHCCCCEEEECCCCEEEEEEECCEEECCCCHHHHHHHHHHHH
LNGEQYAFWSFDKKKGTVICYQVYDGKMIYDNENSKLVIHVNEQKEALSYEQTMLVDLEK
CCCCEEEEEEECCCCCCEEEEEEECCEEEEECCCCEEEEEECCCHHHHHHHHHHEEEHHH
YERKQDVVPAIKAIETLYRRGHLQPGDHVTRIELGYYGLVQFTASQVLTPTWHIVVNRKK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECEEEHEEEHHHHHCCCEEEEEEECCC
DYFVNAFEGQVINDQGNVLE
CEEEEEECCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]