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The map label for this gene is yrkJ [H]

Identifier: 138895624

GI number: 138895624

Start: 2098247

End: 2099029

Strand: Reverse

Name: yrkJ [H]

Synonym: GTNG_1977

Alternate gene names: 138895624

Gene position: 2099029-2098247 (Counterclockwise)

Preceding gene: 138895625

Following gene: 138895619

Centisome position: 59.12

GC content: 51.09

Gene sequence:

>783_bases
ATGGACTTATCGCTCCAGTTGATCATTGTCATCTTTTTGATCGGCTTTATCGGCTCCTTTATTTCCGGTATGGTCGGTAT
TGGTGGATCCATTATTAAATATCCGATGCTTTTATACCTGCCGCCGTTGTTTGGGCTCGCAGCATTCAGCGCCCATGAAG
TATCCGGTATTAGCGCCGTGCAAGTGTTTTTCGCGACGATCGGCGGCGTATGGGCGTACCGGAAGGGCGGCTACTTGAAT
AAATCGCTCATTTTGTATATGGGGGCAAGCATTTTAATTGGCAGTTTCGTCGGCGGCTATGGCTCGAAGCTAATGAGTGA
AGGAGCGATGAACGTTGTCTACGGCGTGCTGGCGGCGTTGGCAGCGATCATGATGTTTGTGCCGAAAAAAGGGATCGATG
ACATTCCGCTCGACCAAGTGACATTCAACAAATGGCTGGCGGCCGTCTTGGCGTTCCTCATTGGCGTTGGATCCGGCATC
GTCGGGGCGGCGGGGGCATTTTTGCTTGTGCCGATTATGCTCGTCGTCTTGAAAATCCCGACTCGAATGACGATCGCTAC
TTCTTTGGCGGTGACGTTCATTTCCTCGATCGGCTCGACGTTTGGGAAAATCACCACGGGCCAAGTCGATTACATTCCAG
CGCTCGTTATGGTTGCCGCAAGTTTGCTTGCCTCACCGCTCGGGGCGAAAACCGGACAAAAGATGAATACGAAAGTGTTA
CAAGTGATCTTGGCGGTATTGGTTTTGGCGACAGCGGTGAACATATGGGTGGATATTTTGTGA

Upstream 100 bases:

>100_bases
ATCATACTCATGCCTAATGGGCGGTTGCTTAGGTAGAGGGGGATGTGCTGAACAGATCCCCCTCGTTTTTCAATGAAGAT
TAGGAGAGGGGGCACGAAGG

Downstream 100 bases:

>100_bases
TCGAAGTTGCTGATGCCACCGGGGATGTAGAATTGCGAGAGGGGCGATGGCAATGGAAAGGACAGAAAGGAAAGCCGACG
ATGTTCCATTATACCATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDLSLQLIIVIFLIGFIGSFISGMVGIGGSIIKYPMLLYLPPLFGLAAFSAHEVSGISAVQVFFATIGGVWAYRKGGYLN
KSLILYMGASILIGSFVGGYGSKLMSEGAMNVVYGVLAALAAIMMFVPKKGIDDIPLDQVTFNKWLAAVLAFLIGVGSGI
VGAAGAFLLVPIMLVVLKIPTRMTIATSLAVTFISSIGSTFGKITTGQVDYIPALVMVAASLLASPLGAKTGQKMNTKVL
QVILAVLVLATAVNIWVDIL

Sequences:

>Translated_260_residues
MDLSLQLIIVIFLIGFIGSFISGMVGIGGSIIKYPMLLYLPPLFGLAAFSAHEVSGISAVQVFFATIGGVWAYRKGGYLN
KSLILYMGASILIGSFVGGYGSKLMSEGAMNVVYGVLAALAAIMMFVPKKGIDDIPLDQVTFNKWLAAVLAFLIGVGSGI
VGAAGAFLLVPIMLVVLKIPTRMTIATSLAVTFISSIGSTFGKITTGQVDYIPALVMVAASLLASPLGAKTGQKMNTKVL
QVILAVLVLATAVNIWVDIL
>Mature_260_residues
MDLSLQLIIVIFLIGFIGSFISGMVGIGGSIIKYPMLLYLPPLFGLAAFSAHEVSGISAVQVFFATIGGVWAYRKGGYLN
KSLILYMGASILIGSFVGGYGSKLMSEGAMNVVYGVLAALAAIMMFVPKKGIDDIPLDQVTFNKWLAAVLAFLIGVGSGI
VGAAGAFLLVPIMLVVLKIPTRMTIATSLAVTFISSIGSTFGKITTGQVDYIPALVMVAASLLASPLGAKTGQKMNTKVL
QVILAVLVLATAVNIWVDIL

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27141; Mature: 27141

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]