| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is ywtE [H]
Identifier: 138895619
GI number: 138895619
Start: 2094831
End: 2095679
Strand: Reverse
Name: ywtE [H]
Synonym: GTNG_1972
Alternate gene names: 138895619
Gene position: 2095679-2094831 (Counterclockwise)
Preceding gene: 138895624
Following gene: 138895618
Centisome position: 59.03
GC content: 58.42
Gene sequence:
>849_bases ATGCTGATTGCTTTAGATATGGACGGAACGCTATTAAACGGGGAAGGAAAAATTAGCGAGCAAAACCGCAAGGCGATCAT GGCTGCGCAAGCACAAGGTCATCTCGTCGCTGTCGTCACCGGACGGGCGCGCAAAGATGCGCTCGCCCCGCTTCGCGAGG CGGGGCTCGTCTGTCCGATTGCCAGCTTAAACGGAGCGATCGTGACGCTTGAAGACGGTACCGTCATCAGCCAAGCGCCG CTTGAGCGAACGGTGATCCGTCATGCGCTGGATTGGGTGCGTGAACAGTCTGATTTGTATTGCGAGACGTACGTAGGTGA TGAGGTGTACGTCGGCTTGCACAACCGCGCCCAATGGGAGGCGCTCGCTTTGGAGAAGACCGAGGTGGCGCCAGAGGTGA AATGGATTGTGATGAAACAGTTTCAACAGGCGCGGGTGACGTACGTCGATGACATCCGCACGGTGTGGGACGACCCGAAG CGGGTGATCTATAAGCTGCTGATTTTCTCCCTTGACCGCGAACGTCTGCGCGATGCGGCGTCCCACTTTGACCCGCTGCC GGGCGTGACGGTCACGTCATCGCATCCGCACAACATTGAGGTGAACAACGAACGGGCGACGAAAGGGGAAGCGCTCAAGC AGCTTGCCTCCCATTACGGCATCGATTTGCGCGATACGGTCGTCTTTGGCGACAGCCATAACGACTTGTCAATGTTTGAG GTCGCGGGATGTCGTGTCGCCATGGCCAACGCCGCCCCGGAACTGAAATCCACATGCGACTTCGTCACCCTCTCCCATGA GGAAGACGGCGTAGCGGCAGGGCTCGAGCAAGTGCTTGTGCGGCGGTGA
Upstream 100 bases:
>100_bases TATAATAGGGGAGCGGTCAAGAGGACGGTTGGAGCGGAAAGCAAGCTGCTATGGTTTGCGGGCAGCGACAGAGAATAGCG AAAGAGAGAGGGATGAATGG
Downstream 100 bases:
>100_bases ATGGTCATCGGCTGCCCGGTTTGCACACCCCAAAATGGCCGGAAAAACGGCAGGGGTGTGCAAGCCTCTTTTTCTTTCGT TTATCGAAATATTTCGTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MLIALDMDGTLLNGEGKISEQNRKAIMAAQAQGHLVAVVTGRARKDALAPLREAGLVCPIASLNGAIVTLEDGTVISQAP LERTVIRHALDWVREQSDLYCETYVGDEVYVGLHNRAQWEALALEKTEVAPEVKWIVMKQFQQARVTYVDDIRTVWDDPK RVIYKLLIFSLDRERLRDAASHFDPLPGVTVTSSHPHNIEVNNERATKGEALKQLASHYGIDLRDTVVFGDSHNDLSMFE VAGCRVAMANAAPELKSTCDFVTLSHEEDGVAAGLEQVLVRR
Sequences:
>Translated_282_residues MLIALDMDGTLLNGEGKISEQNRKAIMAAQAQGHLVAVVTGRARKDALAPLREAGLVCPIASLNGAIVTLEDGTVISQAP LERTVIRHALDWVREQSDLYCETYVGDEVYVGLHNRAQWEALALEKTEVAPEVKWIVMKQFQQARVTYVDDIRTVWDDPK RVIYKLLIFSLDRERLRDAASHFDPLPGVTVTSSHPHNIEVNNERATKGEALKQLASHYGIDLRDTVVFGDSHNDLSMFE VAGCRVAMANAAPELKSTCDFVTLSHEEDGVAAGLEQVLVRR >Mature_282_residues MLIALDMDGTLLNGEGKISEQNRKAIMAAQAQGHLVAVVTGRARKDALAPLREAGLVCPIASLNGAIVTLEDGTVISQAP LERTVIRHALDWVREQSDLYCETYVGDEVYVGLHNRAQWEALALEKTEVAPEVKWIVMKQFQQARVTYVDDIRTVWDDPK RVIYKLLIFSLDRERLRDAASHFDPLPGVTVTSSHPHNIEVNNERATKGEALKQLASHYGIDLRDTVVFGDSHNDLSMFE VAGCRVAMANAAPELKSTCDFVTLSHEEDGVAAGLEQVLVRR
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI2367265, Length=292, Percent_Identity=31.1643835616438, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1786982, Length=285, Percent_Identity=25.2631578947368, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 31210; Mature: 31210
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS01228 COF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIALDMDGTLLNGEGKISEQNRKAIMAAQAQGHLVAVVTGRARKDALAPLREAGLVCPI CEEEEECCCEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCEEEE ASLNGAIVTLEDGTVISQAPLERTVIRHALDWVREQSDLYCETYVGDEVYVGLHNRAQWE ECCCCEEEEEECCCEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCH ALALEKTEVAPEVKWIVMKQFQQARVTYVDDIRTVWDDPKRVIYKLLIFSLDRERLRDAA HEEEEHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHH SHFDPLPGVTVTSSHPHNIEVNNERATKGEALKQLASHYGIDLRDTVVFGDSHNDLSMFE HHCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEE VAGCRVAMANAAPELKSTCDFVTLSHEEDGVAAGLEQVLVRR CCCCEEEECCCCCCHHCCCCEEEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure MLIALDMDGTLLNGEGKISEQNRKAIMAAQAQGHLVAVVTGRARKDALAPLREAGLVCPI CEEEEECCCEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCEEEE ASLNGAIVTLEDGTVISQAPLERTVIRHALDWVREQSDLYCETYVGDEVYVGLHNRAQWE ECCCCEEEEEECCCEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCH ALALEKTEVAPEVKWIVMKQFQQARVTYVDDIRTVWDDPKRVIYKLLIFSLDRERLRDAA HEEEEHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHH SHFDPLPGVTVTSSHPHNIEVNNERATKGEALKQLASHYGIDLRDTVVFGDSHNDLSMFE HHCCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEE VAGCRVAMANAAPELKSTCDFVTLSHEEDGVAAGLEQVLVRR CCCCEEEECCCCCCHHCCCCEEEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]