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The map label for this gene is yiaO [C]

Identifier: 138895524

GI number: 138895524

Start: 1999021

End: 1999755

Strand: Reverse

Name: yiaO [C]

Synonym: GTNG_1874

Alternate gene names: 138895524

Gene position: 1999755-1999021 (Counterclockwise)

Preceding gene: 138895525

Following gene: 138895523

Centisome position: 56.33

GC content: 42.31

Gene sequence:

>735_bases
ATGGGGATTCCGGGATTGATTATGCAAAATGATATCGCGAAAATGGGAGTTCCAGAATGGCCATTTTTATTCAAAGATTT
TGAGCATGTAAAGAACGTGCTGAACGGCCCGATCGGGGAGGAAATCACCGCAGAACTCGAGACAAAACATGGTGTTGTTC
CGTTGGCGTGGAGTGCAAATGGATTTCGCATGTTTTCATCGAATAGAACGATCGACTCAATCAAAGATTTTAAAGGATTA
CGTCTGCGAATGCCAAACATTCCGAATTATATTACGATCGGGAAACTTCTAGGAGCAAACGTCACCCCGCTACCGATTTC
GGAAGTTTTCACCGCCTTAGAGCAAAAGGTAGTAGACGGACAGGATAATCCAATCGCCACATTACGAGCTTCGGGATGGT
ACGAAGTTCAAACGGATGTATTAGAGTCGAAACATATGTTTAGCCCGAATGTGTATGTGGTCAATAAAAAGTTTTGGGAC
AGCTTGACTGACGAACAGCGGAAAATCATTCAAGAAGCAGCCAAAGAGGCGGCAGATTATGAATTTGAGTTGATGGAAAA
AAGCTACGAAGAAGACAAGAAGTTTTTACAAGAACATGGCATTAAGTTCACCACTCCTGATGATAAGTTTGTAAAACAAA
TGGAAGAAGCAGTACAGCCGTTGTATGATGAGCTGTTCAAGAAATACGATTGGGCCGAAGACCTGTATAAGAGAATCAAA
GCAGAGGCGAAATAA

Upstream 100 bases:

>100_bases
GGAAAAATCTAGAGGAAGTCTCAAAGTGGAGATTTACCCTAACAGTGCGTTAGGGGCAGAGCAGGAGTTCTACAATGGTG
TTCGCAACGGCACAATTGAA

Downstream 100 bases:

>100_bases
ACCAGGCTACAGTTAAAAGGGTGATTAAATTGTTAAGAAGAATCGGGAAAATATTAGATACCACGTTGAATGTATTGATG
GCGGTAGCGCTTGCCTTTAT

Product: ABC transporter periplasmic solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MGIPGLIMQNDIAKMGVPEWPFLFKDFEHVKNVLNGPIGEEITAELETKHGVVPLAWSANGFRMFSSNRTIDSIKDFKGL
RLRMPNIPNYITIGKLLGANVTPLPISEVFTALEQKVVDGQDNPIATLRASGWYEVQTDVLESKHMFSPNVYVVNKKFWD
SLTDEQRKIIQEAAKEAADYEFELMEKSYEEDKKFLQEHGIKFTTPDDKFVKQMEEAVQPLYDELFKKYDWAEDLYKRIK
AEAK

Sequences:

>Translated_244_residues
MGIPGLIMQNDIAKMGVPEWPFLFKDFEHVKNVLNGPIGEEITAELETKHGVVPLAWSANGFRMFSSNRTIDSIKDFKGL
RLRMPNIPNYITIGKLLGANVTPLPISEVFTALEQKVVDGQDNPIATLRASGWYEVQTDVLESKHMFSPNVYVVNKKFWD
SLTDEQRKIIQEAAKEAADYEFELMEKSYEEDKKFLQEHGIKFTTPDDKFVKQMEEAVQPLYDELFKKYDWAEDLYKRIK
AEAK
>Mature_243_residues
GIPGLIMQNDIAKMGVPEWPFLFKDFEHVKNVLNGPIGEEITAELETKHGVVPLAWSANGFRMFSSNRTIDSIKDFKGLR
LRMPNIPNYITIGKLLGANVTPLPISEVFTALEQKVVDGQDNPIATLRASGWYEVQTDVLESKHMFSPNVYVVNKKFWDS
LTDEQRKIIQEAAKEAADYEFELMEKSYEEDKKFLQEHGIKFTTPDDKFVKQMEEAVQPLYDELFKKYDWAEDLYKRIKA
EAK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=227, Percent_Identity=31.7180616740088, Blast_Score=123, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 28102; Mature: 27971

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIPGLIMQNDIAKMGVPEWPFLFKDFEHVKNVLNGPIGEEITAELETKHGVVPLAWSAN
CCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCC
GFRMFSSNRTIDSIKDFKGLRLRMPNIPNYITIGKLLGANVTPLPISEVFTALEQKVVDG
CEEEECCCCCHHHHHHCCCCEEECCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHCC
QDNPIATLRASGWYEVQTDVLESKHMFSPNVYVVNKKFWDSLTDEQRKIIQEAAKEAADY
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
EFELMEKSYEEDKKFLQEHGIKFTTPDDKFVKQMEEAVQPLYDELFKKYDWAEDLYKRIK
HHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AEAK
HCCC
>Mature Secondary Structure 
GIPGLIMQNDIAKMGVPEWPFLFKDFEHVKNVLNGPIGEEITAELETKHGVVPLAWSAN
CCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECCC
GFRMFSSNRTIDSIKDFKGLRLRMPNIPNYITIGKLLGANVTPLPISEVFTALEQKVVDG
CEEEECCCCCHHHHHHCCCCEEECCCCCCCEEHHHHHCCCCCCCCHHHHHHHHHHHHHCC
QDNPIATLRASGWYEVQTDVLESKHMFSPNVYVVNKKFWDSLTDEQRKIIQEAAKEAADY
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCC
EFELMEKSYEEDKKFLQEHGIKFTTPDDKFVKQMEEAVQPLYDELFKKYDWAEDLYKRIK
HHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AEAK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]