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The map label for this gene is yajO [H]

Identifier: 138895525

GI number: 138895525

Start: 2000538

End: 2001485

Strand: Reverse

Name: yajO [H]

Synonym: GTNG_1875

Alternate gene names: 138895525

Gene position: 2001485-2000538 (Counterclockwise)

Preceding gene: 138895526

Following gene: 138895524

Centisome position: 56.37

GC content: 52.53

Gene sequence:

>948_bases
ATGAAGTACCGAAAACTCGGCCGCACCGGGCTCAAAGTGAGTGAAATCAGTTTAGGCAGCTGGCTTACATATGGCAACTC
GGTGGAAAAAGAAACGGCGGTCCGCGTCATTGACAAAGCGTATGAGCTTGGGATTAACTCGTTTGACACGGCGAATGTGT
ATGCACGCGGGGAAGCGGAAAAGATTGTCGGCGAGGCGCTGCGCAAATATCCGCGTGAGTCGTACGTCATCGCGACGAAA
GTGTTTTGGCCGATGGGCGACGGACCGAATGACCGCGGCTTGTCGCGCAAACATGTGTTTGAGCAGCTTCATGCGAGCTT
AAAACGGCTGCAGCTTGATTACGTGGATATTTACTACTGCCATCGTTATGACAAAGAGACGCCGGTCGATGAAACGCTGC
GCACGATCGATGATCTTGTCCGCCAAGGGAAAGTGCTTTATGTCGGCGTCAGCGAATGGACAGCTCAGCAAATTCAAGAA
GCGCTCGGCGTAGCCGATCACTACTTGCTTGACCGGATCGTTGTCAATCAGCCACAGTACAACATGCTCCATCGGTACAT
CGAAAAAGAAGTCATCCCGGTATGTGAACAAAACGGCATCAGCCAAATCGTCTTCTCACCGCTTGCGCAAGGGGTGTTGA
CCGGCAAATACAAGCGAGGACAAGCGTTGCCGGCTGACAGCCGCGCCGCCGATCCGAAAGCAAACACGTTTATCCAAGGA
TTCTTGAATGACGAAGTGTTAATAAAAGTAGAACAGCTGGAAAAAGTCGCTGCTGAGCTCGGCATTACGTTATCGCAGCT
TGCTCTCGCTTGGGTGTTGCGCCAACCGAACGTTGCCAGCGCCTTAATCGGCGCCAGCCGTCCGGAACAAGTGGAAGAAA
ACGTCAAGGCGGTCGATGTGGTGCTTAGCGAAGAGGTGCTTGAGAAAATCGAGGGGATTTTGGCGTAA

Upstream 100 bases:

>100_bases
TGAATAGTCAGGCAAATTCCTTTGCAAAGAAACAGCTGAGGATTATAATGAGAGAGTAATCTGTTTGGCATTGATTGCAT
TAAAGGGGAGGAGAAGGAAA

Downstream 100 bases:

>100_bases
AAAGGCACTATAAGAAAAGATTGAGACCATCCTTTCGAAGACCAGAGGGTATTCGGGAGGATGGCATTTTTTATAAATAT
ATGAAAAAGTATGTTGAAAA

Product: putative K+ channel subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKYRKLGRTGLKVSEISLGSWLTYGNSVEKETAVRVIDKAYELGINSFDTANVYARGEAEKIVGEALRKYPRESYVIATK
VFWPMGDGPNDRGLSRKHVFEQLHASLKRLQLDYVDIYYCHRYDKETPVDETLRTIDDLVRQGKVLYVGVSEWTAQQIQE
ALGVADHYLLDRIVVNQPQYNMLHRYIEKEVIPVCEQNGISQIVFSPLAQGVLTGKYKRGQALPADSRAADPKANTFIQG
FLNDEVLIKVEQLEKVAAELGITLSQLALAWVLRQPNVASALIGASRPEQVEENVKAVDVVLSEEVLEKIEGILA

Sequences:

>Translated_315_residues
MKYRKLGRTGLKVSEISLGSWLTYGNSVEKETAVRVIDKAYELGINSFDTANVYARGEAEKIVGEALRKYPRESYVIATK
VFWPMGDGPNDRGLSRKHVFEQLHASLKRLQLDYVDIYYCHRYDKETPVDETLRTIDDLVRQGKVLYVGVSEWTAQQIQE
ALGVADHYLLDRIVVNQPQYNMLHRYIEKEVIPVCEQNGISQIVFSPLAQGVLTGKYKRGQALPADSRAADPKANTFIQG
FLNDEVLIKVEQLEKVAAELGITLSQLALAWVLRQPNVASALIGASRPEQVEENVKAVDVVLSEEVLEKIEGILA
>Mature_315_residues
MKYRKLGRTGLKVSEISLGSWLTYGNSVEKETAVRVIDKAYELGINSFDTANVYARGEAEKIVGEALRKYPRESYVIATK
VFWPMGDGPNDRGLSRKHVFEQLHASLKRLQLDYVDIYYCHRYDKETPVDETLRTIDDLVRQGKVLYVGVSEWTAQQIQE
ALGVADHYLLDRIVVNQPQYNMLHRYIEKEVIPVCEQNGISQIVFSPLAQGVLTGKYKRGQALPADSRAADPKANTFIQG
FLNDEVLIKVEQLEKVAAELGITLSQLALAWVLRQPNVASALIGASRPEQVEENVKAVDVVLSEEVLEKIEGILA

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Homo sapiens, GI27436969, Length=330, Percent_Identity=40.3030303030303, Blast_Score=245, Evalue=4e-65,
Organism=Homo sapiens, GI4504825, Length=328, Percent_Identity=40.2439024390244, Blast_Score=243, Evalue=1e-64,
Organism=Homo sapiens, GI27436964, Length=322, Percent_Identity=40.3726708074534, Blast_Score=242, Evalue=3e-64,
Organism=Homo sapiens, GI27436962, Length=322, Percent_Identity=40.0621118012422, Blast_Score=239, Evalue=2e-63,
Organism=Homo sapiens, GI27436966, Length=322, Percent_Identity=39.7515527950311, Blast_Score=238, Evalue=5e-63,
Organism=Homo sapiens, GI27436971, Length=330, Percent_Identity=40, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI223718702, Length=291, Percent_Identity=29.8969072164948, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI41152114, Length=291, Percent_Identity=28.8659793814433, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI41327764, Length=275, Percent_Identity=30.1818181818182, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI223718708, Length=141, Percent_Identity=34.7517730496454, Blast_Score=72, Evalue=5e-13,
Organism=Escherichia coli, GI87081735, Length=320, Percent_Identity=39.6875, Blast_Score=221, Evalue=5e-59,
Organism=Escherichia coli, GI1789375, Length=324, Percent_Identity=37.6543209876543, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1788070, Length=322, Percent_Identity=36.0248447204969, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=35.1585014409222, Blast_Score=161, Evalue=4e-41,
Organism=Escherichia coli, GI1788081, Length=294, Percent_Identity=27.891156462585, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1787674, Length=298, Percent_Identity=27.8523489932886, Blast_Score=93, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI212645785, Length=319, Percent_Identity=25.705329153605, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17550248, Length=324, Percent_Identity=27.1604938271605, Blast_Score=67, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6325169, Length=333, Percent_Identity=31.5315315315315, Blast_Score=168, Evalue=9e-43,
Organism=Saccharomyces cerevisiae, GI6323998, Length=331, Percent_Identity=30.5135951661631, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6319958, Length=303, Percent_Identity=29.7029702970297, Blast_Score=119, Evalue=9e-28,
Organism=Saccharomyces cerevisiae, GI6319951, Length=334, Percent_Identity=26.9461077844311, Blast_Score=107, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6322615, Length=258, Percent_Identity=27.1317829457364, Blast_Score=92, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6321052, Length=149, Percent_Identity=31.5436241610738, Blast_Score=69, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24640980, Length=336, Percent_Identity=28.5714285714286, Blast_Score=151, Evalue=7e-37,
Organism=Drosophila melanogaster, GI45549126, Length=336, Percent_Identity=28.5714285714286, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24646155, Length=311, Percent_Identity=30.2250803858521, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24646159, Length=305, Percent_Identity=25.9016393442623, Blast_Score=103, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35392; Mature: 35392

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRKLGRTGLKVSEISLGSWLTYGNSVEKETAVRVIDKAYELGINSFDTANVYARGEAE
CCCHHHCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHH
KIVGEALRKYPRESYVIATKVFWPMGDGPNDRGLSRKHVFEQLHASLKRLQLDYVDIYYC
HHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEE
HRYDKETPVDETLRTIDDLVRQGKVLYVGVSEWTAQQIQEALGVADHYLLDRIVVNQPQY
ECCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
NMLHRYIEKEVIPVCEQNGISQIVFSPLAQGVLTGKYKRGQALPADSRAADPKANTFIQG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
FLNDEVLIKVEQLEKVAAELGITLSQLALAWVLRQPNVASALIGASRPEQVEENVKAVDV
HCCCHHEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHH
VLSEEVLEKIEGILA
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYRKLGRTGLKVSEISLGSWLTYGNSVEKETAVRVIDKAYELGINSFDTANVYARGEAE
CCCHHHCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCHHH
KIVGEALRKYPRESYVIATKVFWPMGDGPNDRGLSRKHVFEQLHASLKRLQLDYVDIYYC
HHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEE
HRYDKETPVDETLRTIDDLVRQGKVLYVGVSEWTAQQIQEALGVADHYLLDRIVVNQPQY
ECCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
NMLHRYIEKEVIPVCEQNGISQIVFSPLAQGVLTGKYKRGQALPADSRAADPKANTFIQG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
FLNDEVLIKVEQLEKVAAELGITLSQLALAWVLRQPNVASALIGASRPEQVEENVKAVDV
HCCCHHEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHH
VLSEEVLEKIEGILA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]