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The map label for this gene is gerKC [H]

Identifier: 138895134

GI number: 138895134

Start: 1554814

End: 1556010

Strand: Direct

Name: gerKC [H]

Synonym: GTNG_1472

Alternate gene names: 138895134

Gene position: 1554814-1556010 (Clockwise)

Preceding gene: 138895133

Following gene: 138895135

Centisome position: 43.79

GC content: 49.87

Gene sequence:

>1197_bases
ATGAAACGGGCCTTCGCCCTTTTTATATCACTCACCGCCTATGTTTGTTTGCTTGCGGGTTGCTGGAGTCAAAGAGAACT
GACTGATTTGGCGTTTGTCATTGCCATTGGCCTTGATAAAACGGAAGAAGGCGAATATTTAGCCTCGCTTCAAGTCGTCA
ATCCGGGCAACGTCGCCGGGGCAATGCCGAGCGGTGGTGGGGCGGGAGGCGTGCCGGTGTCGATCTATACGTCGACCGGA
GACAGTGTGTCCGAAGCATCTAGGAAAGCTACGGAAAAAGTGTCGCGTCTCTTGTATTATGCCCATACGAACTTAGTTGT
CGTCAGTGAAGAGCTGGCGCGCGAAGGATTGGATGAGGTGTTTGATGTCATGGAGCGGCACCATCAATTCCGGACGACAG
CCAAACTTGTCATCGCTCGCGGCCATTCAGCGAAAGAGGTGCTCTCGGTGCTAACACCGATCGATAAAATTTCCGCCAGA
CAAATTATTCAAATGCTTAAGTTTTCCGAGCTGGCATGGGGAGAAACGAGCAATATCGATATATGGCGGACGGTTCGCGA
CATAGCCGTGTCTCAGAGAAACCCAGTGATGACCGGTGTAGCCATTGAAGGGGATCCTAGAAAAGGAAAACGGCAAGAAA
ATGTTCAGTCGTCCGTACCGGATGCACGCATCAAATTAGACGGGCTCGCTCTGTTTAAAAACGACCGCCTCGTTCGTTGG
GTAGACGGGCCGACAGCAAGGGGCATGATGTGGGTGTTAGAACGTATTCAGCACACAAATCTTACCGTTCCTTGGGAAGG
AAAGAAAGAAGCGATCGGCTATCGGACGACGCGATCAAAAACGAAGGTAAAGGCGAAAATCAAAAACGGCCGTCCGTCCA
TTTCGATCCATATCATAGCGGAAGGAGAACTCAGCGAGTCAAGAATTCCTATTAACTTAGCCAACACTAGTTTGTTATTC
CGCTTAGAAAAAGAACTTGAACGTAGCGCTAAGGAGGACGTCACAAAAGCGATTAAAGCGGCCCAGCGTGAAAAAACAGA
TGTTTTCGGGTTTGGCGCCGCGGTTCACCGCGCTGCTCCACGCTTATGGAAGAAGATCGAGAAAGAGTGGCACGATCGCT
ATTTTCCTGAACTTGATGTCACTGTGACAACAGATATGCATATCCGTCGCACGAGAATGTGGGATAAGCCGTATTAA

Upstream 100 bases:

>100_bases
AGCGGCCTCGTCTTATCAGCCAAAAAAATATCGTTCGGCAATCAGGCGATCAAAAGCCACAGCAGCCAACGCCGTCACGC
CAAGGGAAGGGGGATGAGTC

Downstream 100 bases:

>100_bases
TAATCAATCGTCGCCGGCACAGCCGGCACGTGGGGATGTGGACTAGGCAAAGGCGGTGAATACGATTGGAATCGAGCAAA
ATCAACGTGCGCCAGTTATT

Product: spore germination protein GerKC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MKRAFALFISLTAYVCLLAGCWSQRELTDLAFVIAIGLDKTEEGEYLASLQVVNPGNVAGAMPSGGGAGGVPVSIYTSTG
DSVSEASRKATEKVSRLLYYAHTNLVVVSEELAREGLDEVFDVMERHHQFRTTAKLVIARGHSAKEVLSVLTPIDKISAR
QIIQMLKFSELAWGETSNIDIWRTVRDIAVSQRNPVMTGVAIEGDPRKGKRQENVQSSVPDARIKLDGLALFKNDRLVRW
VDGPTARGMMWVLERIQHTNLTVPWEGKKEAIGYRTTRSKTKVKAKIKNGRPSISIHIIAEGELSESRIPINLANTSLLF
RLEKELERSAKEDVTKAIKAAQREKTDVFGFGAAVHRAAPRLWKKIEKEWHDRYFPELDVTVTTDMHIRRTRMWDKPY

Sequences:

>Translated_398_residues
MKRAFALFISLTAYVCLLAGCWSQRELTDLAFVIAIGLDKTEEGEYLASLQVVNPGNVAGAMPSGGGAGGVPVSIYTSTG
DSVSEASRKATEKVSRLLYYAHTNLVVVSEELAREGLDEVFDVMERHHQFRTTAKLVIARGHSAKEVLSVLTPIDKISAR
QIIQMLKFSELAWGETSNIDIWRTVRDIAVSQRNPVMTGVAIEGDPRKGKRQENVQSSVPDARIKLDGLALFKNDRLVRW
VDGPTARGMMWVLERIQHTNLTVPWEGKKEAIGYRTTRSKTKVKAKIKNGRPSISIHIIAEGELSESRIPINLANTSLLF
RLEKELERSAKEDVTKAIKAAQREKTDVFGFGAAVHRAAPRLWKKIEKEWHDRYFPELDVTVTTDMHIRRTRMWDKPY
>Mature_398_residues
MKRAFALFISLTAYVCLLAGCWSQRELTDLAFVIAIGLDKTEEGEYLASLQVVNPGNVAGAMPSGGGAGGVPVSIYTSTG
DSVSEASRKATEKVSRLLYYAHTNLVVVSEELAREGLDEVFDVMERHHQFRTTAKLVIARGHSAKEVLSVLTPIDKISAR
QIIQMLKFSELAWGETSNIDIWRTVRDIAVSQRNPVMTGVAIEGDPRKGKRQENVQSSVPDARIKLDGLALFKNDRLVRW
VDGPTARGMMWVLERIQHTNLTVPWEGKKEAIGYRTTRSKTKVKAKIKNGRPSISIHIIAEGELSESRIPINLANTSLLF
RLEKELERSAKEDVTKAIKAAQREKTDVFGFGAAVHRAAPRLWKKIEKEWHDRYFPELDVTVTTDMHIRRTRMWDKPY

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 44666; Mature: 44666

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAFALFISLTAYVCLLAGCWSQRELTDLAFVIAIGLDKTEEGEYLASLQVVNPGNVAG
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECCCCCCCCCEEEEEEEECCCCCCC
AMPSGGGAGGVPVSIYTSTGDSVSEASRKATEKVSRLLYYAHTNLVVVSEELAREGLDEV
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHH
FDVMERHHQFRTTAKLVIARGHSAKEVLSVLTPIDKISARQIIQMLKFSELAWGETSNID
HHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
IWRTVRDIAVSQRNPVMTGVAIEGDPRKGKRQENVQSSVPDARIKLDGLALFKNDRLVRW
HHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEEEEEECCCEEEE
VDGPTARGMMWVLERIQHTNLTVPWEGKKEAIGYRTTRSKTKVKAKIKNGRPSISIHIIA
ECCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEE
EGELSESRIPINLANTSLLFRLEKELERSAKEDVTKAIKAAQREKTDVFGFGAAVHRAAP
ECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHH
RLWKKIEKEWHDRYFPELDVTVTTDMHIRRTRMWDKPY
HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCC
>Mature Secondary Structure
MKRAFALFISLTAYVCLLAGCWSQRELTDLAFVIAIGLDKTEEGEYLASLQVVNPGNVAG
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECCCCCCCCCEEEEEEEECCCCCCC
AMPSGGGAGGVPVSIYTSTGDSVSEASRKATEKVSRLLYYAHTNLVVVSEELAREGLDEV
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHH
FDVMERHHQFRTTAKLVIARGHSAKEVLSVLTPIDKISARQIIQMLKFSELAWGETSNID
HHHHHHHHHHHHHHEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
IWRTVRDIAVSQRNPVMTGVAIEGDPRKGKRQENVQSSVPDARIKLDGLALFKNDRLVRW
HHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEEEEEEECCCEEEE
VDGPTARGMMWVLERIQHTNLTVPWEGKKEAIGYRTTRSKTKVKAKIKNGRPSISIHIIA
ECCCCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEE
EGELSESRIPINLANTSLLFRLEKELERSAKEDVTKAIKAAQREKTDVFGFGAAVHRAAP
ECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHH
RLWKKIEKEWHDRYFPELDVTVTTDMHIRRTRMWDKPY
HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]