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The map label for this gene is gerKB [H]

Identifier: 138895135

GI number: 138895135

Start: 1556076

End: 1557179

Strand: Direct

Name: gerKB [H]

Synonym: GTNG_1473

Alternate gene names: 138895135

Gene position: 1556076-1557179 (Clockwise)

Preceding gene: 138895134

Following gene: 138895136

Centisome position: 43.83

GC content: 47.28

Gene sequence:

>1104_bases
TTGGAATCGAGCAAAATCAACGTGCGCCAGTTATTTGTGTTAATTGTGCTATTCGAGCACGGCAGTGCCGTCGTCATTCC
ACTTGGTGTGAGCGCCAAGCAAGATGTATGGATTTCCATTTTGCTTAGCTTGGCGATCGGACTGCTGTTATTTTTCGTTT
ATCGCCGTTTGTTTGAGTATTATCCCGATCAGCCGCTGACTGCTTATCTGCCACAAATTGTCGGAGCACCGCTCGGCAAG
CTGCTAGCTATTGTCTATATTACATATTTTCTTTATATTGCCGCCCGTGTGCTGCGCGACTTTGGCGAACTGTTGTTGAC
GTTTGCCTATCCGGAGACGCCGTTGTTTGTGTTAAATGCGATTATGGCGGTGACTGTGATGTATGGCGTCTATAAAGGAA
TTGAAGTATTGGCGCGCACTGGTGAACTGTTTTTGATAGTGCTTTACTTTTTGGCAATCATCGGATTTGTCCTTGTTTTT
GTTTCTGGGATCGTTGACGTGACCCAACTGCAGCCGATGTTGGAAGAAGGATGGAGGCGGGTATGGAAAACGGTGTTTAC
CGAAACGTTATATGTTCCGTTTGGTGAGATGATCGTGTTTACGATGCTGTTTCCCTATATCAATACTCCGACAAAAGTAG
GACGAGCCGGGGTGGTCGGCATGGTGCTGAGCGGGATCAATTTGGCGCTCATTATGGCGATCAATGTGGCTGTCCTCGGA
CCCGACACGGTATCGCGCTCGTCGTTTCCGCTTTTGGATACGATCCGTCGCGTGCAAGTAGCTGATTTTTTAGAGCGTCT
CGACGTCTTTTTTATGATTACCTTGATCACCGGCGGCTTTTTTAAAATCTCTATCTTTTTTTACGCCGGGATCGTTGGGG
CGGCCAACTTGTTTGGTATTTCGAGCTACCGGCGGCTCGTCTATCCACTCGGTCTGCTTATTCTCATTTTGTCCGTTGTT
ATTGCCAGCAATTATGCGGAACATATTCAAGAAGGATTGAAAATCGTCACCTTTTACTTGCATGTTCCGCTCCAAGTCAT
TATTCCGGTGTTGCTGCTCATCATTGCGGCGATTCGTCGGCGGTTTAACCAGCCGGCAAAATAA

Upstream 100 bases:

>100_bases
TCCGTCGCACGAGAATGTGGGATAAGCCGTATTAATAATCAATCGTCGCCGGCACAGCCGGCACGTGGGGATGTGGACTA
GGCAAAGGCGGTGAATACGA

Downstream 100 bases:

>100_bases
GAAAAACGGACTAGATGGTTTTTGGCGAAAAAAGAAGGAAAATGAATGAAAAAGAGCGAATGAAACAATAGCATTGTTTT
TATTTCGAAACAAATGGGTG

Product: spore germination protein GerKB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MESSKINVRQLFVLIVLFEHGSAVVIPLGVSAKQDVWISILLSLAIGLLLFFVYRRLFEYYPDQPLTAYLPQIVGAPLGK
LLAIVYITYFLYIAARVLRDFGELLLTFAYPETPLFVLNAIMAVTVMYGVYKGIEVLARTGELFLIVLYFLAIIGFVLVF
VSGIVDVTQLQPMLEEGWRRVWKTVFTETLYVPFGEMIVFTMLFPYINTPTKVGRAGVVGMVLSGINLALIMAINVAVLG
PDTVSRSSFPLLDTIRRVQVADFLERLDVFFMITLITGGFFKISIFFYAGIVGAANLFGISSYRRLVYPLGLLILILSVV
IASNYAEHIQEGLKIVTFYLHVPLQVIIPVLLLIIAAIRRRFNQPAK

Sequences:

>Translated_367_residues
MESSKINVRQLFVLIVLFEHGSAVVIPLGVSAKQDVWISILLSLAIGLLLFFVYRRLFEYYPDQPLTAYLPQIVGAPLGK
LLAIVYITYFLYIAARVLRDFGELLLTFAYPETPLFVLNAIMAVTVMYGVYKGIEVLARTGELFLIVLYFLAIIGFVLVF
VSGIVDVTQLQPMLEEGWRRVWKTVFTETLYVPFGEMIVFTMLFPYINTPTKVGRAGVVGMVLSGINLALIMAINVAVLG
PDTVSRSSFPLLDTIRRVQVADFLERLDVFFMITLITGGFFKISIFFYAGIVGAANLFGISSYRRLVYPLGLLILILSVV
IASNYAEHIQEGLKIVTFYLHVPLQVIIPVLLLIIAAIRRRFNQPAK
>Mature_367_residues
MESSKINVRQLFVLIVLFEHGSAVVIPLGVSAKQDVWISILLSLAIGLLLFFVYRRLFEYYPDQPLTAYLPQIVGAPLGK
LLAIVYITYFLYIAARVLRDFGELLLTFAYPETPLFVLNAIMAVTVMYGVYKGIEVLARTGELFLIVLYFLAIIGFVLVF
VSGIVDVTQLQPMLEEGWRRVWKTVFTETLYVPFGEMIVFTMLFPYINTPTKVGRAGVVGMVLSGINLALIMAINVAVLG
PDTVSRSSFPLLDTIRRVQVADFLERLDVFFMITLITGGFFKISIFFYAGIVGAANLFGISSYRRLVYPLGLLILILSVV
IASNYAEHIQEGLKIVTFYLHVPLQVIIPVLLLIIAAIRRRFNQPAK

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004761 [H]

Pfam domain/function: PF03845 Spore_permease [H]

EC number: NA

Molecular weight: Translated: 41139; Mature: 41139

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSKINVRQLFVLIVLFEHGSAVVIPLGVSAKQDVWISILLSLAIGLLLFFVYRRLFEY
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPDQPLTAYLPQIVGAPLGKLLAIVYITYFLYIAARVLRDFGELLLTFAYPETPLFVLNA
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IMAVTVMYGVYKGIEVLARTGELFLIVLYFLAIIGFVLVFVSGIVDVTQLQPMLEEGWRR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWKTVFTETLYVPFGEMIVFTMLFPYINTPTKVGRAGVVGMVLSGINLALIMAINVAVLG
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHEEC
PDTVSRSSFPLLDTIRRVQVADFLERLDVFFMITLITGGFFKISIFFYAGIVGAANLFGI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SSYRRLVYPLGLLILILSVVIASNYAEHIQEGLKIVTFYLHVPLQVIIPVLLLIIAAIRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFNQPAK
HCCCCCC
>Mature Secondary Structure
MESSKINVRQLFVLIVLFEHGSAVVIPLGVSAKQDVWISILLSLAIGLLLFFVYRRLFEY
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPDQPLTAYLPQIVGAPLGKLLAIVYITYFLYIAARVLRDFGELLLTFAYPETPLFVLNA
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
IMAVTVMYGVYKGIEVLARTGELFLIVLYFLAIIGFVLVFVSGIVDVTQLQPMLEEGWRR
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWKTVFTETLYVPFGEMIVFTMLFPYINTPTKVGRAGVVGMVLSGINLALIMAINVAVLG
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHEEC
PDTVSRSSFPLLDTIRRVQVADFLERLDVFFMITLITGGFFKISIFFYAGIVGAANLFGI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SSYRRLVYPLGLLILILSVVIASNYAEHIQEGLKIVTFYLHVPLQVIIPVLLLIIAAIRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFNQPAK
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]