| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is flgG [H]
Identifier: 134300226
GI number: 134300226
Start: 2609407
End: 2610180
Strand: Reverse
Name: flgG [H]
Synonym: Dred_2387
Alternate gene names: 134300226
Gene position: 2610180-2609407 (Counterclockwise)
Preceding gene: 134300227
Following gene: 134300225
Centisome position: 72.34
GC content: 44.32
Gene sequence:
>774_bases ATGCTGCGAGGATTATATATCACCATGAACAGCCTGAATGTCCAACAGGCGAAATTAAATAATGTTACCAATAACCTGTC GAACCTCTCGACAACCGGTTATAAGAAAAATAATATGGTGGATAGTCAATTTGCCGAATCCCTGCAGTTGGCTTTGGAAA ACCATGGCCCGGGAGGAAAACGACAACCCATTGGGAAGGGTATTTTAGGGAATATGATTACTCAAGTTCATATCGATTAC GGACAGGGACCCCTTACGGAAACGGGAAAGCTGACGGATATGGCCTTAGAAGGAAACGGTTATTTTGTAGTAGAGGATGA AAATGGCGAACAATTTTTAACCCGGGACGGCTCTTTCCATGTCAATGAGGAGGGGGCCTTATTAACCGGCGACGGCTTCC GGGTACTGGGCGAAGGCGGACCCATTATCCTTGAAAAACCGGAAGATTTTACCCTTAAGGAAGATGGTACCATTATGGTG GGACAGGGTACAGAAGCAGAAGAAATTGATAAACTGCAAATTGTGGAAGTTTCAGAGCCTGCTCTTTTGAAAAAAACCGA TGGTAATTATTTTCAAGATCCCGAGGGAGTTGCAGAAGCGGCTGTTTCAACCACAGTCACCCAAGGCTGGTTAGAAAAGT CCAATGTGGACCCAGTACAAGAAATGATTAATATCATCCCCGTGGCTCGTATTTACGAGTCCAGCCAGAAGTTAATACAA ATCCAAGATGAGCTTTTGGATAAAGCTATCAATCAGGTGGGGCGAGTGAAATAA
Upstream 100 bases:
>100_bases GAAGTTTCCGAATCCAGAGTTTGTCAACTTCATTCCCAGGTGATGAAAAGATTAAAGAAAACCCTGGAAAGTATGTTAAA TAGTTAGTTGGAGGTAAGCA
Downstream 100 bases:
>100_bases AAGTTAAGAAGTCTGATATCAATTCTTAATAAGTGGGTGATTAAATGATTATTAAGACACTGTCCAGTGGAGCCTCGGGC ATGCGGGCTCACCAATTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MLRGLYITMNSLNVQQAKLNNVTNNLSNLSTTGYKKNNMVDSQFAESLQLALENHGPGGKRQPIGKGILGNMITQVHIDY GQGPLTETGKLTDMALEGNGYFVVEDENGEQFLTRDGSFHVNEEGALLTGDGFRVLGEGGPIILEKPEDFTLKEDGTIMV GQGTEAEEIDKLQIVEVSEPALLKKTDGNYFQDPEGVAEAAVSTTVTQGWLEKSNVDPVQEMINIIPVARIYESSQKLIQ IQDELLDKAINQVGRVK
Sequences:
>Translated_257_residues MLRGLYITMNSLNVQQAKLNNVTNNLSNLSTTGYKKNNMVDSQFAESLQLALENHGPGGKRQPIGKGILGNMITQVHIDY GQGPLTETGKLTDMALEGNGYFVVEDENGEQFLTRDGSFHVNEEGALLTGDGFRVLGEGGPIILEKPEDFTLKEDGTIMV GQGTEAEEIDKLQIVEVSEPALLKKTDGNYFQDPEGVAEAAVSTTVTQGWLEKSNVDPVQEMINIIPVARIYESSQKLIQ IQDELLDKAINQVGRVK >Mature_257_residues MLRGLYITMNSLNVQQAKLNNVTNNLSNLSTTGYKKNNMVDSQFAESLQLALENHGPGGKRQPIGKGILGNMITQVHIDY GQGPLTETGKLTDMALEGNGYFVVEDENGEQFLTRDGSFHVNEEGALLTGDGFRVLGEGGPIILEKPEDFTLKEDGTIMV GQGTEAEEIDKLQIVEVSEPALLKKTDGNYFQDPEGVAEAAVSTTVTQGWLEKSNVDPVQEMINIIPVARIYESSQKLIQ IQDELLDKAINQVGRVK
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=264, Percent_Identity=28.7878787878788, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787317, Length=255, Percent_Identity=27.843137254902, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 28096; Mature: 28096
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGLYITMNSLNVQQAKLNNVTNNLSNLSTTGYKKNNMVDSQFAESLQLALENHGPGGK CCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC RQPIGKGILGNMITQVHIDYGQGPLTETGKLTDMALEGNGYFVVEDENGEQFLTRDGSFH CCCCCCCHHHCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEECCCCEE VNEEGALLTGDGFRVLGEGGPIILEKPEDFTLKEDGTIMVGQGTEAEEIDKLQIVEVSEP ECCCCCEEECCCEEEEECCCCEEEECCCCCEEECCCEEEEECCCCHHHCCCEEEEEECCC ALLKKTDGNYFQDPEGVAEAAVSTTVTQGWLEKSNVDPVQEMINIIPVARIYESSQKLIQ CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IQDELLDKAINQVGRVK HHHHHHHHHHHHHCCCC >Mature Secondary Structure MLRGLYITMNSLNVQQAKLNNVTNNLSNLSTTGYKKNNMVDSQFAESLQLALENHGPGGK CCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC RQPIGKGILGNMITQVHIDYGQGPLTETGKLTDMALEGNGYFVVEDENGEQFLTRDGSFH CCCCCCCHHHCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEECCCCEE VNEEGALLTGDGFRVLGEGGPIILEKPEDFTLKEDGTIMVGQGTEAEEIDKLQIVEVSEP ECCCCCEEECCCEEEEECCCCEEEECCCCCEEECCCEEEEECCCCHHHCCCEEEEEECCC ALLKKTDGNYFQDPEGVAEAAVSTTVTQGWLEKSNVDPVQEMINIIPVARIYESSQKLIQ CEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IQDELLDKAINQVGRVK HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]