| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is flgG [H]
Identifier: 134300225
GI number: 134300225
Start: 2608562
End: 2609362
Strand: Reverse
Name: flgG [H]
Synonym: Dred_2386
Alternate gene names: 134300225
Gene position: 2609362-2608562 (Counterclockwise)
Preceding gene: 134300226
Following gene: 134300224
Centisome position: 72.32
GC content: 45.69
Gene sequence:
>801_bases ATGATTATTAAGACACTGTCCAGTGGAGCCTCGGGCATGCGGGCTCACCAATTAAAACTAGATACCATCGGTAACAACAT TGCTAACATTAACACCACTGCCTTTAAAAAAAATAGGACTGATTTTGGTGAAATTGTCCGACAAGCCATTGGAGAAGATG GGATACCAGCCGCCAACGATCCCAGGCCGGAAGGTGGATCTGGGGTCAGAATCGTATCGCTGGCCAGAGTTATTGACCAG GGTGATTTAATTCAAACTGGTCGTGACCTTGATTTAGCCATAGAAGGACAGGGCTTTTTTAAAGTGACCCCTGCCACCGG GGATGATGACATAGAATACTATACGCGGGATGGGTCTTTTTACATCACAACCATTGATGATGAAACGGTTTTAGTCAACT CCAGTGGTTATAAGCTGGTTTGGGATGGAGAACTGGATGCTGAAACCTATAAAGCATACTCTGTGGATGAAAAGGGAACG GTATGGGGGCAAAGGATTGAAGACGGTAAAACTGAGGAAGTAGGGAATATTGAATTGTTCACCTTTCCGGCACCCTCTGG TCTAGTCAGTAAAGGTAGCAACCTATATATGGCCACAGAGGCCAGTGGAGAGGAGACCTCCGGGGTACCAGGGGAGGATG GCATAGGCTCTATTTATTCTGGTTATCTGGAGCGTTCCAATGTTGATTTAGCCACAGAAATGATTGGTATGATTGAAGCC CAGAGGGCTTACGCTGCCAACTCACGCACTATCCAAACTGCCGATGAAATGTGGGATAGAGCCAATAATTTAAGAAAATA A
Upstream 100 bases:
>100_bases AAATCCAAGATGAGCTTTTGGATAAAGCTATCAATCAGGTGGGGCGAGTGAAATAAAAGTTAAGAAGTCTGATATCAATT CTTAATAAGTGGGTGATTAA
Downstream 100 bases:
>100_bases AATAAATCTTGATGATAATATAGCTTAGGGGGGCGGACATGGAGCTAGCAAAGGGAAATGCGGAAATACAGGTCGGGATA GCCGACTACAAGGTCGCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MIIKTLSSGASGMRAHQLKLDTIGNNIANINTTAFKKNRTDFGEIVRQAIGEDGIPAANDPRPEGGSGVRIVSLARVIDQ GDLIQTGRDLDLAIEGQGFFKVTPATGDDDIEYYTRDGSFYITTIDDETVLVNSSGYKLVWDGELDAETYKAYSVDEKGT VWGQRIEDGKTEEVGNIELFTFPAPSGLVSKGSNLYMATEASGEETSGVPGEDGIGSIYSGYLERSNVDLATEMIGMIEA QRAYAANSRTIQTADEMWDRANNLRK
Sequences:
>Translated_266_residues MIIKTLSSGASGMRAHQLKLDTIGNNIANINTTAFKKNRTDFGEIVRQAIGEDGIPAANDPRPEGGSGVRIVSLARVIDQ GDLIQTGRDLDLAIEGQGFFKVTPATGDDDIEYYTRDGSFYITTIDDETVLVNSSGYKLVWDGELDAETYKAYSVDEKGT VWGQRIEDGKTEEVGNIELFTFPAPSGLVSKGSNLYMATEASGEETSGVPGEDGIGSIYSGYLERSNVDLATEMIGMIEA QRAYAANSRTIQTADEMWDRANNLRK >Mature_266_residues MIIKTLSSGASGMRAHQLKLDTIGNNIANINTTAFKKNRTDFGEIVRQAIGEDGIPAANDPRPEGGSGVRIVSLARVIDQ GDLIQTGRDLDLAIEGQGFFKVTPATGDDDIEYYTRDGSFYITTIDDETVLVNSSGYKLVWDGELDAETYKAYSVDEKGT VWGQRIEDGKTEEVGNIELFTFPAPSGLVSKGSNLYMATEASGEETSGVPGEDGIGSIYSGYLERSNVDLATEMIGMIEA QRAYAANSRTIQTADEMWDRANNLRK
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=267, Percent_Identity=35.9550561797753, Blast_Score=158, Evalue=4e-40, Organism=Escherichia coli, GI1787316, Length=114, Percent_Identity=39.4736842105263, Blast_Score=84, Evalue=1e-17,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 28845; Mature: 28845
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKTLSSGASGMRAHQLKLDTIGNNIANINTTAFKKNRTDFGEIVRQAIGEDGIPAAND CEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCC PRPEGGSGVRIVSLARVIDQGDLIQTGRDLDLAIEGQGFFKVTPATGDDDIEYYTRDGSF CCCCCCCCEEHEEHHHHHCCCCEEECCCCEEEEEECCCEEEECCCCCCCCCEEEEECCCE YITTIDDETVLVNSSGYKLVWDGELDAETYKAYSVDEKGTVWGQRIEDGKTEEVGNIELF EEEEECCCEEEEECCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE TFPAPSGLVSKGSNLYMATEASGEETSGVPGEDGIGSIYSGYLERSNVDLATEMIGMIEA EECCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH QRAYAANSRTIQTADEMWDRANNLRK HHHHHCCCCEEECHHHHHHHHHHCCC >Mature Secondary Structure MIIKTLSSGASGMRAHQLKLDTIGNNIANINTTAFKKNRTDFGEIVRQAIGEDGIPAAND CEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCC PRPEGGSGVRIVSLARVIDQGDLIQTGRDLDLAIEGQGFFKVTPATGDDDIEYYTRDGSF CCCCCCCCEEHEEHHHHHCCCCEEECCCCEEEEEECCCEEEECCCCCCCCCEEEEECCCE YITTIDDETVLVNSSGYKLVWDGELDAETYKAYSVDEKGTVWGQRIEDGKTEEVGNIELF EEEEECCCEEEEECCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE TFPAPSGLVSKGSNLYMATEASGEETSGVPGEDGIGSIYSGYLERSNVDLATEMIGMIEA EECCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH QRAYAANSRTIQTADEMWDRANNLRK HHHHHCCCCEEECHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]