| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is cheY [H]
Identifier: 134300221
GI number: 134300221
Start: 2606210
End: 2606578
Strand: Reverse
Name: cheY [H]
Synonym: Dred_2382
Alternate gene names: 134300221
Gene position: 2606578-2606210 (Counterclockwise)
Preceding gene: 134300222
Following gene: 134300220
Centisome position: 72.24
GC content: 43.63
Gene sequence:
>369_bases ATGGGTAAGCGTATTTTGATTGTGGATGATGCAGCATTTATGCGGATGATGATTAAAAATATATTAACCAAGAATGGTTA TGAAGTTGTAGGAGAGGCAGAGAACGGTGCCGTAGCTTTACAAATGTTTAAGGAGTTAAAACCAGATTTAGTCACAATGG ATATTACCATGCCTGAAATGGATGGGATTCAAGGTGTTAAGGCTATTCGTGCCGTAGATCCCGGAGCTAATATTATTATG TGCAGTGCCATGGGACAGCAGGCCATGGTAATGGAAGCCATACAAGCCGGCGCCAAGGACTTTATTGTCAAGCCCTTCCA GCAGGATCGTATTCTGCAAGCCATTGAACGTGTTCTTTCCCGTGCCTAG
Upstream 100 bases:
>100_bases AAATTAGGGGACATTTCTTTATGATAACAGAGCAAGGTTCTTTGCAAACATTATTTGGTTCACTAGGCATGACAATTTAA TTTTAGGAGGAGTAGTAAAC
Downstream 100 bases:
>100_bases TCAAATATTTTTTTAGGATGGTATCGTAAAGGGGTGTAAAGGTTGTCCAAGGAAGTTCTGAGCCAAGGGGAAATAGACTC ACTTTTGGCAGCATTGATGT
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MGKRILIVDDAAFMRMMIKNILTKNGYEVVGEAENGAVALQMFKELKPDLVTMDITMPEMDGIQGVKAIRAVDPGANIIM CSAMGQQAMVMEAIQAGAKDFIVKPFQQDRILQAIERVLSRA
Sequences:
>Translated_122_residues MGKRILIVDDAAFMRMMIKNILTKNGYEVVGEAENGAVALQMFKELKPDLVTMDITMPEMDGIQGVKAIRAVDPGANIIM CSAMGQQAMVMEAIQAGAKDFIVKPFQQDRILQAIERVLSRA >Mature_121_residues GKRILIVDDAAFMRMMIKNILTKNGYEVVGEAENGAVALQMFKELKPDLVTMDITMPEMDGIQGVKAIRAVDPGANIIMC SAMGQQAMVMEAIQAGAKDFIVKPFQQDRILQAIERVLSRA
Specific function: Has a central controlling role in chemotaxis. Although it is homologous to the CheY protein of other bacteria, it is thought to function in a different manner [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788550, Length=117, Percent_Identity=38.4615384615385, Blast_Score=91, Evalue=2e-20, Organism=Escherichia coli, GI1786599, Length=123, Percent_Identity=32.520325203252, Blast_Score=73, Evalue=5e-15, Organism=Escherichia coli, GI1788191, Length=122, Percent_Identity=32.7868852459016, Blast_Score=71, Evalue=2e-14, Organism=Escherichia coli, GI1788905, Length=119, Percent_Identity=36.9747899159664, Blast_Score=70, Evalue=4e-14, Organism=Escherichia coli, GI1790437, Length=117, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=7e-14, Organism=Escherichia coli, GI1788192, Length=104, Percent_Identity=33.6538461538462, Blast_Score=65, Evalue=9e-13, Organism=Escherichia coli, GI1788712, Length=111, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=2e-12, Organism=Escherichia coli, GI1790299, Length=116, Percent_Identity=31.8965517241379, Blast_Score=63, Evalue=7e-12, Organism=Escherichia coli, GI1787375, Length=118, Percent_Identity=27.1186440677966, Blast_Score=62, Evalue=8e-12, Organism=Escherichia coli, GI1786747, Length=117, Percent_Identity=28.2051282051282, Blast_Score=59, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13416; Mature: 13285
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 9.8 %Met (Translated Protein) 10.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 9.1 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRILIVDDAAFMRMMIKNILTKNGYEVVGEAENGAVALQMFKELKPDLVTMDITMPEM CCCEEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCC DGIQGVKAIRAVDPGANIIMCSAMGQQAMVMEAIQAGAKDFIVKPFQQDRILQAIERVLS CCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHH RA CC >Mature Secondary Structure GKRILIVDDAAFMRMMIKNILTKNGYEVVGEAENGAVALQMFKELKPDLVTMDITMPEM CCEEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCC DGIQGVKAIRAVDPGANIIMCSAMGQQAMVMEAIQAGAKDFIVKPFQQDRILQAIERVLS CCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHH RA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1905718; 9384377; 1447979; 1597417; 8755892 [H]