| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134299809
Identifier: 134299809
GI number: 134299809
Start: 2152497
End: 2153528
Strand: Reverse
Name: 134299809
Synonym: Dred_1962
Alternate gene names: NA
Gene position: 2153528-2152497 (Counterclockwise)
Preceding gene: 134299810
Following gene: 134299808
Centisome position: 59.69
GC content: 40.89
Gene sequence:
>1032_bases ATGATTTATCAGTATTCCGGTGTTGTGCATATTCATTCATTTTATTCGGATGGTTCTGCTGACTTTAAAGGAATAGCCAA AGCGGCTTCAAAGGCAGGAGCCAAATTTATTCTAATAAATGATCACGATACCTTGGCGGGGTTGCACCGGGAAGGTGAGC AATACCTACATGGAGTGTTGGTTCTGGTGGGATCTGAAGTGACCCCAAAGAAGAACCATTTTTTATGCTACGATATTAAC TCTGTGCCCAGTAACAAGCTGTTGCCCCACCAATACGTTAGTCAGGTCTATGAGCAAGGCGGCTTTGGATTTTTAGCTCA TCCTGATCATAAAGAAAACCCTATGTTTCCAGGTAAAATGAACTGGGAGGACTGGGATCTGGATAATGCAGTCGGTTTAG AAATTTGGAATTACTTTTCACAATGGATGGCTAGTTTTAAGAATAAAAAGGGTCTGTTAAAAAGTTTTCTGTTTCCAAAG GCAACCCTTAGCCCCCCTCGTTCAGAGACCTTATTAAAATGGGATCGCTTGGGGAAACAAAGGCCGGTACCTGCCATAGC AGGGGTTGATGCCCATGGCGGAAGGCAGTTGAGTTGGATACCTAATATACTTAGTAGTTATAAGTATCAATTTAAGACAT TCAGAACCCATATACTTGCCAAGGAACCCTTAAAGGGTATTGTGCATAGGGATCGACATATTATTTTATCTGCCATAAAA AGCGGCAGGAGTTATCTTGTTAATCATTGTGCTGGAAGAGTGGAGCATTTTCAATTTTATCTCCAGCACTTAAACAACCA ATGGCATATGGGAGAAGAGGTGAAACAACGACCCAATATGTCACTAAACGTAATACTTCCGACGAAGGCCCATATGAAAG TAATAAAGGACGGTAAATTATTATTACAAAGAAAAACGAATTTTCTTCGACTGCCTAACCCTGATCCCGGAGTCTACAGG GTGGAAGTATATAAAGGTCATGTCAGACCTCGTCCCTGGATATTCTCAAATCATATTTATATAAGGAATTGA
Upstream 100 bases:
>100_bases AAGTAGATTCGCTTAGATACAAGATATTACCTTTATACATATTCATGCATTTGCTTTAAAATATTGTTGTACCATGCAAA CTAATTAACTGAGGTGCAAC
Downstream 100 bases:
>100_bases ACTCAATTTCAAGATTCTAAAGTAGCTTCGAATCACATAATCCTTTGTCAAAAAGAAGTGACTAATATTCCAGAGGGGAT GTATAGATTTTATACTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: PHP Domain Protein; Phosphoesterase PHP-Like Protein
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MIYQYSGVVHIHSFYSDGSADFKGIAKAASKAGAKFILINDHDTLAGLHREGEQYLHGVLVLVGSEVTPKKNHFLCYDIN SVPSNKLLPHQYVSQVYEQGGFGFLAHPDHKENPMFPGKMNWEDWDLDNAVGLEIWNYFSQWMASFKNKKGLLKSFLFPK ATLSPPRSETLLKWDRLGKQRPVPAIAGVDAHGGRQLSWIPNILSSYKYQFKTFRTHILAKEPLKGIVHRDRHIILSAIK SGRSYLVNHCAGRVEHFQFYLQHLNNQWHMGEEVKQRPNMSLNVILPTKAHMKVIKDGKLLLQRKTNFLRLPNPDPGVYR VEVYKGHVRPRPWIFSNHIYIRN
Sequences:
>Translated_343_residues MIYQYSGVVHIHSFYSDGSADFKGIAKAASKAGAKFILINDHDTLAGLHREGEQYLHGVLVLVGSEVTPKKNHFLCYDIN SVPSNKLLPHQYVSQVYEQGGFGFLAHPDHKENPMFPGKMNWEDWDLDNAVGLEIWNYFSQWMASFKNKKGLLKSFLFPK ATLSPPRSETLLKWDRLGKQRPVPAIAGVDAHGGRQLSWIPNILSSYKYQFKTFRTHILAKEPLKGIVHRDRHIILSAIK SGRSYLVNHCAGRVEHFQFYLQHLNNQWHMGEEVKQRPNMSLNVILPTKAHMKVIKDGKLLLQRKTNFLRLPNPDPGVYR VEVYKGHVRPRPWIFSNHIYIRN >Mature_343_residues MIYQYSGVVHIHSFYSDGSADFKGIAKAASKAGAKFILINDHDTLAGLHREGEQYLHGVLVLVGSEVTPKKNHFLCYDIN SVPSNKLLPHQYVSQVYEQGGFGFLAHPDHKENPMFPGKMNWEDWDLDNAVGLEIWNYFSQWMASFKNKKGLLKSFLFPK ATLSPPRSETLLKWDRLGKQRPVPAIAGVDAHGGRQLSWIPNILSSYKYQFKTFRTHILAKEPLKGIVHRDRHIILSAIK SGRSYLVNHCAGRVEHFQFYLQHLNNQWHMGEEVKQRPNMSLNVILPTKAHMKVIKDGKLLLQRKTNFLRLPNPDPGVYR VEVYKGHVRPRPWIFSNHIYIRN
Specific function: Unknown
COG id: COG0613
COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39485; Mature: 39485
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYQYSGVVHIHSFYSDGSADFKGIAKAASKAGAKFILINDHDTLAGLHREGEQYLHGVL CEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH VLVGSEVTPKKNHFLCYDINSVPSNKLLPHQYVSQVYEQGGFGFLAHPDHKENPMFPGKM HEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC NWEDWDLDNAVGLEIWNYFSQWMASFKNKKGLLKSFLFPKATLSPPRSETLLKWDRLGKQ CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC RPVPAIAGVDAHGGRQLSWIPNILSSYKYQFKTFRTHILAKEPLKGIVHRDRHIILSAIK CCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SGRSYLVNHCAGRVEHFQFYLQHLNNQWHMGEEVKQRPNMSLNVILPTKAHMKVIKDGKL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHCCCCE LLQRKTNFLRLPNPDPGVYRVEVYKGHVRPRPWIFSNHIYIRN EEEECCCEEECCCCCCCEEEEEEEECCCCCCCEEEECCEEEEC >Mature Secondary Structure MIYQYSGVVHIHSFYSDGSADFKGIAKAASKAGAKFILINDHDTLAGLHREGEQYLHGVL CEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHH VLVGSEVTPKKNHFLCYDINSVPSNKLLPHQYVSQVYEQGGFGFLAHPDHKENPMFPGKM HEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC NWEDWDLDNAVGLEIWNYFSQWMASFKNKKGLLKSFLFPKATLSPPRSETLLKWDRLGKQ CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC RPVPAIAGVDAHGGRQLSWIPNILSSYKYQFKTFRTHILAKEPLKGIVHRDRHIILSAIK CCCCEEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH SGRSYLVNHCAGRVEHFQFYLQHLNNQWHMGEEVKQRPNMSLNVILPTKAHMKVIKDGKL CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEEEECCHHHHHHHCCCCE LLQRKTNFLRLPNPDPGVYRVEVYKGHVRPRPWIFSNHIYIRN EEEECCCEEECCCCCCCEEEEEEEECCCCCCCEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA