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The map label for this gene is rimP

Identifier: 134299808

GI number: 134299808

Start: 2151694

End: 2152155

Strand: Reverse

Name: rimP

Synonym: Dred_1961

Alternate gene names: 134299808

Gene position: 2152155-2151694 (Counterclockwise)

Preceding gene: 134299809

Following gene: 134299807

Centisome position: 59.65

GC content: 40.04

Gene sequence:

>462_bases
TTGGCTAAGAGTACCGTAGTAGAGAAAGTAACAGAAGCTGTAGCGCCGATTGTAGAAGAGGCAAAACTGGAATTGGTTGA
TGTTGAGTATGTCAAAGAAGGTGGAAACTGGTATTTAAGGATTTTTATTGACAAACCCGGCGGGATTGAATTGGATGACT
GTCAGGGTGTATCTGAAAAAATCGACACCCTTCTTGATGAAATAGACCCAGTGCCCCAGGCCTATTTTTTAGAAGTATCC
TCACCTGGCATAGAAAGACCGCTGAAGAAACCACAAGATTTTGAAAAATTTAATGGTCATTTGGTGAACATAACCACCTT
TGCCCCTATAAATGGTTCGAAAAATTTTATTGGTAAATTATTAGACTATAATGAAGAGGGAATTCACCTGGAGATTAAAG
GGAAACAGGTTGTATTACCCCATCAACAGGTTGCCACCGCACGTTTGGCAGTAGAAATTTGA

Upstream 100 bases:

>100_bases
TGTATCAATTATTTGTGCTTAGGAGAGGAGTGGGATTTTCCCACTCTTTCGTATTAGTTTAGGTAATTGCGACTTTACTA
AGTTTAAGGGAGGATTATCT

Downstream 100 bases:

>100_bases
TATTATTGGGGGGAGCAAAAAAGTGAACAGTGAGTTCTTAGAAGCCTTGAGAGATTTAGAAAAAGAGAAGGGTATTGCAG
TGGATGTGCTGTTAGAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MAKSTVVEKVTEAVAPIVEEAKLELVDVEYVKEGGNWYLRIFIDKPGGIELDDCQGVSEKIDTLLDEIDPVPQAYFLEVS
SPGIERPLKKPQDFEKFNGHLVNITTFAPINGSKNFIGKLLDYNEEGIHLEIKGKQVVLPHQQVATARLAVEI

Sequences:

>Translated_153_residues
MAKSTVVEKVTEAVAPIVEEAKLELVDVEYVKEGGNWYLRIFIDKPGGIELDDCQGVSEKIDTLLDEIDPVPQAYFLEVS
SPGIERPLKKPQDFEKFNGHLVNITTFAPINGSKNFIGKLLDYNEEGIHLEIKGKQVVLPHQQVATARLAVEI
>Mature_152_residues
AKSTVVEKVTEAVAPIVEEAKLELVDVEYVKEGGNWYLRIFIDKPGGIELDDCQGVSEKIDTLLDEIDPVPQAYFLEVSS
PGIERPLKKPQDFEKFNGHLVNITTFAPINGSKNFIGKLLDYNEEGIHLEIKGKQVVLPHQQVATARLAVEI

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=146, Percent_Identity=34.9315068493151, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_DESRM (A4J5X6)

Other databases:

- EMBL:   CP000612
- RefSeq:   YP_001113304.1
- STRING:   A4J5X6
- GeneID:   4956225
- GenomeReviews:   CP000612_GR
- KEGG:   drm:Dred_1961
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- PhylomeDB:   A4J5X6
- ProtClustDB:   PRK00092
- BioCyc:   DRED349161:DRED_1961-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17030; Mature: 16898

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSTVVEKVTEAVAPIVEEAKLELVDVEYVKEGGNWYLRIFIDKPGGIELDDCQGVSEK
CCCHHHHHHHHHHHHHHHHHHHEEEEEHEEEECCCCEEEEEEEECCCCCCCHHCCCHHHH
IDTLLDEIDPVPQAYFLEVSSPGIERPLKKPQDFEKFNGHLVNITTFAPINGSKNFIGKL
HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCEEEEEEEEECCCCCHHHHHHH
LDYNEEGIHLEIKGKQVVLPHQQVATARLAVEI
HCCCCCCEEEEECCCEEECCHHHHHHEEEEEEC
>Mature Secondary Structure 
AKSTVVEKVTEAVAPIVEEAKLELVDVEYVKEGGNWYLRIFIDKPGGIELDDCQGVSEK
CCHHHHHHHHHHHHHHHHHHHEEEEEHEEEECCCCEEEEEEEECCCCCCCHHCCCHHHH
IDTLLDEIDPVPQAYFLEVSSPGIERPLKKPQDFEKFNGHLVNITTFAPINGSKNFIGKL
HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCEEEEEEEEECCCCCHHHHHHH
LDYNEEGIHLEIKGKQVVLPHQQVATARLAVEI
HCCCCCCEEEEECCCEEECCHHHHHHEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA