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The map label for this gene is 134299810

Identifier: 134299810

GI number: 134299810

Start: 2153688

End: 2154479

Strand: Reverse

Name: 134299810

Synonym: Dred_1963

Alternate gene names: NA

Gene position: 2154479-2153688 (Counterclockwise)

Preceding gene: 134299812

Following gene: 134299809

Centisome position: 59.71

GC content: 40.66

Gene sequence:

>792_bases
ATGGATGACAAAGAAAATAAAAAGACCGTTGAAAAAGATACTAATCAGGATAAACACCAAAGTACTGTAAAACCGCAAAA
ACCAAAGGAGGTAGTTTCCTCAACCTATGCCAATGAAAAGATGGGTTGGTATTATAAGCCCAATAAAGAGCATCAATTAC
CGGAGGTAAACAACCGTGGCAAAGAGTCACTGGCAAAATATCGCGGTATTTACCATGGAGATATTAGTGGCAAGAATTTG
TACCTGACCTTTGATGAAGGCTATGAAAATGGATATACTTCAAAAATTTTAGATACTCTAAGGGATGCCAATGTTAAGGT
GACATTTTTCATTACAGGTGATTACCTTCGGAGAAACCCTGAACTGGTCAAACGAATGGTAAGAGAAGGACACATTGTGG
GCAATCATACAGATAATCATCCCAGTCTACCTACGGTCAGTGATGCTACTTTGCAAAAAGAGATTAATTCTTTAAGCGAT
GCATTTACCAAGGAAACCGGAGCAACAATGCAATATTTGCGCCCGCCCATGGGAGAATACAGTGAAAGAACGTTAAAGTT
GACTTATGAAATGGGCTACAGAAATGTCTTTTGGTCTGTTGCCATGGTGGACTGGCGACCGGATGCAGGGACCCCGGAGC
AAAATAAGAACACAGTAAAAGAACGTCTGCATAACGGAGCAGTTATCTTGCTTCATGCTGTTAACAAGGCAAATGCTGAT
ATGCTTGGTAGCTTAATTCAAGAATGCAGGGATGAGGGCTACCGTTTTTGTGGCCTGGAAGAAATACAATAA

Upstream 100 bases:

>100_bases
GGTGTTGGTTTATAAAAGTACAACTACCAATTCGGTTGAAAAACAAATTGTACAAGAGTCTACCATGACAACGGAAACAC
CCCCAAAAATTGACCCCACC

Downstream 100 bases:

>100_bases
TCTTGCACTCTAAAGCCCGGTCTATGACCGGGCTTAAACAATAGTATCATGTTGTACTAAAGTAGATTCGCTTAGATACA
AGATATTACCTTTATACATA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MDDKENKKTVEKDTNQDKHQSTVKPQKPKEVVSSTYANEKMGWYYKPNKEHQLPEVNNRGKESLAKYRGIYHGDISGKNL
YLTFDEGYENGYTSKILDTLRDANVKVTFFITGDYLRRNPELVKRMVREGHIVGNHTDNHPSLPTVSDATLQKEINSLSD
AFTKETGATMQYLRPPMGEYSERTLKLTYEMGYRNVFWSVAMVDWRPDAGTPEQNKNTVKERLHNGAVILLHAVNKANAD
MLGSLIQECRDEGYRFCGLEEIQ

Sequences:

>Translated_263_residues
MDDKENKKTVEKDTNQDKHQSTVKPQKPKEVVSSTYANEKMGWYYKPNKEHQLPEVNNRGKESLAKYRGIYHGDISGKNL
YLTFDEGYENGYTSKILDTLRDANVKVTFFITGDYLRRNPELVKRMVREGHIVGNHTDNHPSLPTVSDATLQKEINSLSD
AFTKETGATMQYLRPPMGEYSERTLKLTYEMGYRNVFWSVAMVDWRPDAGTPEQNKNTVKERLHNGAVILLHAVNKANAD
MLGSLIQECRDEGYRFCGLEEIQ
>Mature_263_residues
MDDKENKKTVEKDTNQDKHQSTVKPQKPKEVVSSTYANEKMGWYYKPNKEHQLPEVNNRGKESLAKYRGIYHGDISGKNL
YLTFDEGYENGYTSKILDTLRDANVKVTFFITGDYLRRNPELVKRMVREGHIVGNHTDNHPSLPTVSDATLQKEINSLSD
AFTKETGATMQYLRPPMGEYSERTLKLTYEMGYRNVFWSVAMVDWRPDAGTPEQNKNTVKERLHNGAVILLHAVNKANAD
MLGSLIQECRDEGYRFCGLEEIQ

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=189, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014235 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 30203; Mature: 30203

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKENKKTVEKDTNQDKHQSTVKPQKPKEVVSSTYANEKMGWYYKPNKEHQLPEVNNRG
CCCCCHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
KESLAKYRGIYHGDISGKNLYLTFDEGYENGYTSKILDTLRDANVKVTFFITGDYLRRNP
HHHHHHHCCCEECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEECHHHHCCH
ELVKRMVREGHIVGNHTDNHPSLPTVSDATLQKEINSLSDAFTKETGATMQYLRPPMGEY
HHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCC
SERTLKLTYEMGYRNVFWSVAMVDWRPDAGTPEQNKNTVKERLHNGAVILLHAVNKANAD
CCCEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCHH
MLGSLIQECRDEGYRFCGLEEIQ
HHHHHHHHHHHCCCEECCHHCCC
>Mature Secondary Structure
MDDKENKKTVEKDTNQDKHQSTVKPQKPKEVVSSTYANEKMGWYYKPNKEHQLPEVNNRG
CCCCCHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCC
KESLAKYRGIYHGDISGKNLYLTFDEGYENGYTSKILDTLRDANVKVTFFITGDYLRRNP
HHHHHHHCCCEECCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEECHHHHCCH
ELVKRMVREGHIVGNHTDNHPSLPTVSDATLQKEINSLSDAFTKETGATMQYLRPPMGEY
HHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCC
SERTLKLTYEMGYRNVFWSVAMVDWRPDAGTPEQNKNTVKERLHNGAVILLHAVNKANAD
CCCEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCHH
MLGSLIQECRDEGYRFCGLEEIQ
HHHHHHHHHHHCCCEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8473853 [H]