| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134298736
Identifier: 134298736
GI number: 134298736
Start: 927853
End: 929628
Strand: Reverse
Name: 134298736
Synonym: Dred_0870
Alternate gene names: NA
Gene position: 929628-927853 (Counterclockwise)
Preceding gene: 134298737
Following gene: 134298735
Centisome position: 25.77
GC content: 37.11
Gene sequence:
>1776_bases ATGAAACTATCAAAAGTAGAGATTAAAAATTTCAGAAGGGTAGAACATGCTGAAATAAACCTTAGCCCTGCATCATTTAT CATTGGGCCAAATAATTACGGGAAAAGCTCAATTTTACGCGCTATCGATGCATTACTCTCATTAAAGGAAGATGTTATTA AGCCGGATGATTTTAGACTCCTCCCTGATGGCAACAGGTGCCAAACAATAGAAATATGCGGCTGGTTTAGTGATATTGAC CCAGAAACTGCCAATAGCCGAGGATTTAAAGGTAGAGTAATTAACGGCCAATTTTTTTATAAAAAGACGTATACCCTTTC AAATACAACAAAACCAGTCATAGAAACCTTTTTATATCCTTATCAAATAGTAGAACCATTTGACAAAGTTAAAACCTACA CAGATCTCCTAGGGGTTGGCTTAACCGAGGAACAAATCCAAGAATCACTAGGAGTAAAAAAAGTAGAAAACAAAAAATTA CCCAATGAATGGGAATTTAAAATTGAAGGAGCAATTGAATGGGATATGGAAGCAGAACCACAACTGTTCAAAAATCCTGG CGGGGCACCCTCAAACGTGAATTCAAAACTACCGAGATTATTGTATATTCCTTCTTACGCCAATTCTGATGACGTAGGAA AAGCCGATAGCAACAAAACTCTTCTAGGTGAGTGCCTTGGTTATATTTTTGAGGATATACTCGCAGATAACCAGCTCGCT AAAGATATTCAAGAAAACCTTAATGAACTTCAGAAGCAAATGTCTCCAGATACAGATGAATCACTTATTAAAGTTCTTTG CTCTGAAGTTAATAATATAATTGGAGACGTTTTCCCTAACTGTGGCATTCATATAAATCCTTCTTTACAGGGCCTAACGG AGATACTTAAACCAAAATACTCTGTAGAAATGTATTCAAATGTTAACACTGATGCCACTAGACAAGGTACTGGTCTCATA AGAACGGCAATCTTCTCAATGCTTAAATATCATGCAAAATTGAAAGCAAAAAAAGAGACTAGGACAAAGCCCTTAATTAT TGCCTTTGAAGAGCCAGAAATTTACCTTCACCCATCAGCTGCTAACATGTTGCGAGACACAATTTATAGCCTTGGTCTGT CAAACCAAATAATTAGTACAACCCATTCTCCATGGATGATTGATCTTTCAAAGGAATGGCAAAGCCTTACAAAGGTTTAT TTAAACAAAAATGGCTTCATGTCAACCATTAATTATGGCGTTTCGGAAGCCCTCAAGAATCTAGAAGAAGATGAAAAGCA ACATGTAAAAATGATAAAAACATTTGACGATGAACTTTCCAGGGTATTCTTTGCGGAGAAATGCCTAATTGTAGAGGGTG ACTCTGAACAAATAGCAATTAAGAATACTCTTAATCTCTTGCCAGAAGATGTCCAGAAGGAAATTAAATCTACCTTTCAA ATTACAAAGGCAAGGGGTAAAGCCGCCATTATTTCTCTAGTTAAATACCTTCAGGCTCTCTCAATTAACCCAATTGTAAT GCATGATTTAGATAGCCAAACAGAAGGTGCGGCAAAAATGAATAAACATATTGAAGCAGCTGTTGGAGATACATCCAGGG TATTCCCACTCCAGGACTGTTTAGAGGATTGTTTGAATTACAAAGTACCAACATCGGACAAACCCTACAGGGCATTTGTA GAAACTTCTAAATGGGCTTCGTGGGATGACGTACCCCCTGTTTGGGCCGCTATTATCAGAAGCATATTTGAAATTAATGC TCTTGAGGTTAGTTAA
Upstream 100 bases:
>100_bases TTATTTCTTAGTTACAGAGGAGTTCAAGAACTCAAATGGCAGTTGCTTTAAGAAGCTGTTTTCACTTAAGTGAACGTTAA CAGTTTACGGAGGTTAAATA
Downstream 100 bases:
>100_bases TTGGCAACCCTATTCACTTAAATAAACAAGTCCCCTCCAGAATCAACTAGCCAGGATAGGATTAACCTACCTGACTAGTT TTACGTAGAAATTCACTGTT
Product: ATP-dependent OLD family endonuclease
Products: NA
Alternate protein names: ATP-Dependent Endonuclease Of OLD Family-Like Protein; Overcoming Lysogenization Defect Protein; OLD Protein; ATP-Dependent Endonuclease Of OLD Family; ATP Dependent Endonuclease; ATP-Dependent Endonuclease; SMC Domain Protein; OLD Family ATP-Dependent Endonuclease-Like Protein
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MKLSKVEIKNFRRVEHAEINLSPASFIIGPNNYGKSSILRAIDALLSLKEDVIKPDDFRLLPDGNRCQTIEICGWFSDID PETANSRGFKGRVINGQFFYKKTYTLSNTTKPVIETFLYPYQIVEPFDKVKTYTDLLGVGLTEEQIQESLGVKKVENKKL PNEWEFKIEGAIEWDMEAEPQLFKNPGGAPSNVNSKLPRLLYIPSYANSDDVGKADSNKTLLGECLGYIFEDILADNQLA KDIQENLNELQKQMSPDTDESLIKVLCSEVNNIIGDVFPNCGIHINPSLQGLTEILKPKYSVEMYSNVNTDATRQGTGLI RTAIFSMLKYHAKLKAKKETRTKPLIIAFEEPEIYLHPSAANMLRDTIYSLGLSNQIISTTHSPWMIDLSKEWQSLTKVY LNKNGFMSTINYGVSEALKNLEEDEKQHVKMIKTFDDELSRVFFAEKCLIVEGDSEQIAIKNTLNLLPEDVQKEIKSTFQ ITKARGKAAIISLVKYLQALSINPIVMHDLDSQTEGAAKMNKHIEAAVGDTSRVFPLQDCLEDCLNYKVPTSDKPYRAFV ETSKWASWDDVPPVWAAIIRSIFEINALEVS
Sequences:
>Translated_591_residues MKLSKVEIKNFRRVEHAEINLSPASFIIGPNNYGKSSILRAIDALLSLKEDVIKPDDFRLLPDGNRCQTIEICGWFSDID PETANSRGFKGRVINGQFFYKKTYTLSNTTKPVIETFLYPYQIVEPFDKVKTYTDLLGVGLTEEQIQESLGVKKVENKKL PNEWEFKIEGAIEWDMEAEPQLFKNPGGAPSNVNSKLPRLLYIPSYANSDDVGKADSNKTLLGECLGYIFEDILADNQLA KDIQENLNELQKQMSPDTDESLIKVLCSEVNNIIGDVFPNCGIHINPSLQGLTEILKPKYSVEMYSNVNTDATRQGTGLI RTAIFSMLKYHAKLKAKKETRTKPLIIAFEEPEIYLHPSAANMLRDTIYSLGLSNQIISTTHSPWMIDLSKEWQSLTKVY LNKNGFMSTINYGVSEALKNLEEDEKQHVKMIKTFDDELSRVFFAEKCLIVEGDSEQIAIKNTLNLLPEDVQKEIKSTFQ ITKARGKAAIISLVKYLQALSINPIVMHDLDSQTEGAAKMNKHIEAAVGDTSRVFPLQDCLEDCLNYKVPTSDKPYRAFV ETSKWASWDDVPPVWAAIIRSIFEINALEVS >Mature_591_residues MKLSKVEIKNFRRVEHAEINLSPASFIIGPNNYGKSSILRAIDALLSLKEDVIKPDDFRLLPDGNRCQTIEICGWFSDID PETANSRGFKGRVINGQFFYKKTYTLSNTTKPVIETFLYPYQIVEPFDKVKTYTDLLGVGLTEEQIQESLGVKKVENKKL PNEWEFKIEGAIEWDMEAEPQLFKNPGGAPSNVNSKLPRLLYIPSYANSDDVGKADSNKTLLGECLGYIFEDILADNQLA KDIQENLNELQKQMSPDTDESLIKVLCSEVNNIIGDVFPNCGIHINPSLQGLTEILKPKYSVEMYSNVNTDATRQGTGLI RTAIFSMLKYHAKLKAKKETRTKPLIIAFEEPEIYLHPSAANMLRDTIYSLGLSNQIISTTHSPWMIDLSKEWQSLTKVY LNKNGFMSTINYGVSEALKNLEEDEKQHVKMIKTFDDELSRVFFAEKCLIVEGDSEQIAIKNTLNLLPEDVQKEIKSTFQ ITKARGKAAIISLVKYLQALSINPIVMHDLDSQTEGAAKMNKHIEAAVGDTSRVFPLQDCLEDCLNYKVPTSDKPYRAFV ETSKWASWDDVPPVWAAIIRSIFEINALEVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66721; Mature: 66721
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSKVEIKNFRRVEHAEINLSPASFIIGPNNYGKSSILRAIDALLSLKEDVIKPDDFRL CCCCHHHHHHHHHHHHCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE LPDGNRCQTIEICGWFSDIDPETANSRGFKGRVINGQFFYKKTYTLSNTTKPVIETFLYP CCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEEEEEECCCCHHHHHHHHCH YQIVEPFDKVKTYTDLLGVGLTEEQIQESLGVKKVENKKLPNEWEFKIEGAIEWDMEAEP HHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCEECCCCCCCCCCEEEEECEEEECCCCCC QLFKNPGGAPSNVNSKLPRLLYIPSYANSDDVGKADSNKTLLGECLGYIFEDILADNQLA HHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH KDIQENLNELQKQMSPDTDESLIKVLCSEVNNIIGDVFPNCGIHINPSLQGLTEILKPKY HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCC SVEMYSNVNTDATRQGTGLIRTAIFSMLKYHAKLKAKKETRTKPLIIAFEEPEIYLHPSA EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCH ANMLRDTIYSLGLSNQIISTTHSPWMIDLSKEWQSLTKVYLNKNGFMSTINYGVSEALKN HHHHHHHHHHHCCCCCHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LEEDEKQHVKMIKTFDDELSRVFFAEKCLIVEGDSEQIAIKNTLNLLPEDVQKEIKSTFQ HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEHHHHHCCCHHHHHHHHHHHH ITKARGKAAIISLVKYLQALSINPIVMHDLDSQTEGAAKMNKHIEAAVGDTSRVFPLQDC HHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH LEDCLNYKVPTSDKPYRAFVETSKWASWDDVPPVWAAIIRSIFEINALEVS HHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEECC >Mature Secondary Structure MKLSKVEIKNFRRVEHAEINLSPASFIIGPNNYGKSSILRAIDALLSLKEDVIKPDDFRL CCCCHHHHHHHHHHHHCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE LPDGNRCQTIEICGWFSDIDPETANSRGFKGRVINGQFFYKKTYTLSNTTKPVIETFLYP CCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEEEEEECCCCHHHHHHHHCH YQIVEPFDKVKTYTDLLGVGLTEEQIQESLGVKKVENKKLPNEWEFKIEGAIEWDMEAEP HHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCEECCCCCCCCCCEEEEECEEEECCCCCC QLFKNPGGAPSNVNSKLPRLLYIPSYANSDDVGKADSNKTLLGECLGYIFEDILADNQLA HHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH KDIQENLNELQKQMSPDTDESLIKVLCSEVNNIIGDVFPNCGIHINPSLQGLTEILKPKY HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCC SVEMYSNVNTDATRQGTGLIRTAIFSMLKYHAKLKAKKETRTKPLIIAFEEPEIYLHPSA EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCH ANMLRDTIYSLGLSNQIISTTHSPWMIDLSKEWQSLTKVYLNKNGFMSTINYGVSEALKN HHHHHHHHHHHCCCCCHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH LEEDEKQHVKMIKTFDDELSRVFFAEKCLIVEGDSEQIAIKNTLNLLPEDVQKEIKSTFQ HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEHHHHHCCCHHHHHHHHHHHH ITKARGKAAIISLVKYLQALSINPIVMHDLDSQTEGAAKMNKHIEAAVGDTSRVFPLQDC HHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH LEDCLNYKVPTSDKPYRAFVETSKWASWDDVPPVWAAIIRSIFEINALEVS HHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA