Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134298736

Identifier: 134298736

GI number: 134298736

Start: 927853

End: 929628

Strand: Reverse

Name: 134298736

Synonym: Dred_0870

Alternate gene names: NA

Gene position: 929628-927853 (Counterclockwise)

Preceding gene: 134298737

Following gene: 134298735

Centisome position: 25.77

GC content: 37.11

Gene sequence:

>1776_bases
ATGAAACTATCAAAAGTAGAGATTAAAAATTTCAGAAGGGTAGAACATGCTGAAATAAACCTTAGCCCTGCATCATTTAT
CATTGGGCCAAATAATTACGGGAAAAGCTCAATTTTACGCGCTATCGATGCATTACTCTCATTAAAGGAAGATGTTATTA
AGCCGGATGATTTTAGACTCCTCCCTGATGGCAACAGGTGCCAAACAATAGAAATATGCGGCTGGTTTAGTGATATTGAC
CCAGAAACTGCCAATAGCCGAGGATTTAAAGGTAGAGTAATTAACGGCCAATTTTTTTATAAAAAGACGTATACCCTTTC
AAATACAACAAAACCAGTCATAGAAACCTTTTTATATCCTTATCAAATAGTAGAACCATTTGACAAAGTTAAAACCTACA
CAGATCTCCTAGGGGTTGGCTTAACCGAGGAACAAATCCAAGAATCACTAGGAGTAAAAAAAGTAGAAAACAAAAAATTA
CCCAATGAATGGGAATTTAAAATTGAAGGAGCAATTGAATGGGATATGGAAGCAGAACCACAACTGTTCAAAAATCCTGG
CGGGGCACCCTCAAACGTGAATTCAAAACTACCGAGATTATTGTATATTCCTTCTTACGCCAATTCTGATGACGTAGGAA
AAGCCGATAGCAACAAAACTCTTCTAGGTGAGTGCCTTGGTTATATTTTTGAGGATATACTCGCAGATAACCAGCTCGCT
AAAGATATTCAAGAAAACCTTAATGAACTTCAGAAGCAAATGTCTCCAGATACAGATGAATCACTTATTAAAGTTCTTTG
CTCTGAAGTTAATAATATAATTGGAGACGTTTTCCCTAACTGTGGCATTCATATAAATCCTTCTTTACAGGGCCTAACGG
AGATACTTAAACCAAAATACTCTGTAGAAATGTATTCAAATGTTAACACTGATGCCACTAGACAAGGTACTGGTCTCATA
AGAACGGCAATCTTCTCAATGCTTAAATATCATGCAAAATTGAAAGCAAAAAAAGAGACTAGGACAAAGCCCTTAATTAT
TGCCTTTGAAGAGCCAGAAATTTACCTTCACCCATCAGCTGCTAACATGTTGCGAGACACAATTTATAGCCTTGGTCTGT
CAAACCAAATAATTAGTACAACCCATTCTCCATGGATGATTGATCTTTCAAAGGAATGGCAAAGCCTTACAAAGGTTTAT
TTAAACAAAAATGGCTTCATGTCAACCATTAATTATGGCGTTTCGGAAGCCCTCAAGAATCTAGAAGAAGATGAAAAGCA
ACATGTAAAAATGATAAAAACATTTGACGATGAACTTTCCAGGGTATTCTTTGCGGAGAAATGCCTAATTGTAGAGGGTG
ACTCTGAACAAATAGCAATTAAGAATACTCTTAATCTCTTGCCAGAAGATGTCCAGAAGGAAATTAAATCTACCTTTCAA
ATTACAAAGGCAAGGGGTAAAGCCGCCATTATTTCTCTAGTTAAATACCTTCAGGCTCTCTCAATTAACCCAATTGTAAT
GCATGATTTAGATAGCCAAACAGAAGGTGCGGCAAAAATGAATAAACATATTGAAGCAGCTGTTGGAGATACATCCAGGG
TATTCCCACTCCAGGACTGTTTAGAGGATTGTTTGAATTACAAAGTACCAACATCGGACAAACCCTACAGGGCATTTGTA
GAAACTTCTAAATGGGCTTCGTGGGATGACGTACCCCCTGTTTGGGCCGCTATTATCAGAAGCATATTTGAAATTAATGC
TCTTGAGGTTAGTTAA

Upstream 100 bases:

>100_bases
TTATTTCTTAGTTACAGAGGAGTTCAAGAACTCAAATGGCAGTTGCTTTAAGAAGCTGTTTTCACTTAAGTGAACGTTAA
CAGTTTACGGAGGTTAAATA

Downstream 100 bases:

>100_bases
TTGGCAACCCTATTCACTTAAATAAACAAGTCCCCTCCAGAATCAACTAGCCAGGATAGGATTAACCTACCTGACTAGTT
TTACGTAGAAATTCACTGTT

Product: ATP-dependent OLD family endonuclease

Products: NA

Alternate protein names: ATP-Dependent Endonuclease Of OLD Family-Like Protein; Overcoming Lysogenization Defect Protein; OLD Protein; ATP-Dependent Endonuclease Of OLD Family; ATP Dependent Endonuclease; ATP-Dependent Endonuclease; SMC Domain Protein; OLD Family ATP-Dependent Endonuclease-Like Protein

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MKLSKVEIKNFRRVEHAEINLSPASFIIGPNNYGKSSILRAIDALLSLKEDVIKPDDFRLLPDGNRCQTIEICGWFSDID
PETANSRGFKGRVINGQFFYKKTYTLSNTTKPVIETFLYPYQIVEPFDKVKTYTDLLGVGLTEEQIQESLGVKKVENKKL
PNEWEFKIEGAIEWDMEAEPQLFKNPGGAPSNVNSKLPRLLYIPSYANSDDVGKADSNKTLLGECLGYIFEDILADNQLA
KDIQENLNELQKQMSPDTDESLIKVLCSEVNNIIGDVFPNCGIHINPSLQGLTEILKPKYSVEMYSNVNTDATRQGTGLI
RTAIFSMLKYHAKLKAKKETRTKPLIIAFEEPEIYLHPSAANMLRDTIYSLGLSNQIISTTHSPWMIDLSKEWQSLTKVY
LNKNGFMSTINYGVSEALKNLEEDEKQHVKMIKTFDDELSRVFFAEKCLIVEGDSEQIAIKNTLNLLPEDVQKEIKSTFQ
ITKARGKAAIISLVKYLQALSINPIVMHDLDSQTEGAAKMNKHIEAAVGDTSRVFPLQDCLEDCLNYKVPTSDKPYRAFV
ETSKWASWDDVPPVWAAIIRSIFEINALEVS

Sequences:

>Translated_591_residues
MKLSKVEIKNFRRVEHAEINLSPASFIIGPNNYGKSSILRAIDALLSLKEDVIKPDDFRLLPDGNRCQTIEICGWFSDID
PETANSRGFKGRVINGQFFYKKTYTLSNTTKPVIETFLYPYQIVEPFDKVKTYTDLLGVGLTEEQIQESLGVKKVENKKL
PNEWEFKIEGAIEWDMEAEPQLFKNPGGAPSNVNSKLPRLLYIPSYANSDDVGKADSNKTLLGECLGYIFEDILADNQLA
KDIQENLNELQKQMSPDTDESLIKVLCSEVNNIIGDVFPNCGIHINPSLQGLTEILKPKYSVEMYSNVNTDATRQGTGLI
RTAIFSMLKYHAKLKAKKETRTKPLIIAFEEPEIYLHPSAANMLRDTIYSLGLSNQIISTTHSPWMIDLSKEWQSLTKVY
LNKNGFMSTINYGVSEALKNLEEDEKQHVKMIKTFDDELSRVFFAEKCLIVEGDSEQIAIKNTLNLLPEDVQKEIKSTFQ
ITKARGKAAIISLVKYLQALSINPIVMHDLDSQTEGAAKMNKHIEAAVGDTSRVFPLQDCLEDCLNYKVPTSDKPYRAFV
ETSKWASWDDVPPVWAAIIRSIFEINALEVS
>Mature_591_residues
MKLSKVEIKNFRRVEHAEINLSPASFIIGPNNYGKSSILRAIDALLSLKEDVIKPDDFRLLPDGNRCQTIEICGWFSDID
PETANSRGFKGRVINGQFFYKKTYTLSNTTKPVIETFLYPYQIVEPFDKVKTYTDLLGVGLTEEQIQESLGVKKVENKKL
PNEWEFKIEGAIEWDMEAEPQLFKNPGGAPSNVNSKLPRLLYIPSYANSDDVGKADSNKTLLGECLGYIFEDILADNQLA
KDIQENLNELQKQMSPDTDESLIKVLCSEVNNIIGDVFPNCGIHINPSLQGLTEILKPKYSVEMYSNVNTDATRQGTGLI
RTAIFSMLKYHAKLKAKKETRTKPLIIAFEEPEIYLHPSAANMLRDTIYSLGLSNQIISTTHSPWMIDLSKEWQSLTKVY
LNKNGFMSTINYGVSEALKNLEEDEKQHVKMIKTFDDELSRVFFAEKCLIVEGDSEQIAIKNTLNLLPEDVQKEIKSTFQ
ITKARGKAAIISLVKYLQALSINPIVMHDLDSQTEGAAKMNKHIEAAVGDTSRVFPLQDCLEDCLNYKVPTSDKPYRAFV
ETSKWASWDDVPPVWAAIIRSIFEINALEVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66721; Mature: 66721

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSKVEIKNFRRVEHAEINLSPASFIIGPNNYGKSSILRAIDALLSLKEDVIKPDDFRL
CCCCHHHHHHHHHHHHCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
LPDGNRCQTIEICGWFSDIDPETANSRGFKGRVINGQFFYKKTYTLSNTTKPVIETFLYP
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEEEEEECCCCHHHHHHHHCH
YQIVEPFDKVKTYTDLLGVGLTEEQIQESLGVKKVENKKLPNEWEFKIEGAIEWDMEAEP
HHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCEECCCCCCCCCCEEEEECEEEECCCCCC
QLFKNPGGAPSNVNSKLPRLLYIPSYANSDDVGKADSNKTLLGECLGYIFEDILADNQLA
HHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH
KDIQENLNELQKQMSPDTDESLIKVLCSEVNNIIGDVFPNCGIHINPSLQGLTEILKPKY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCC
SVEMYSNVNTDATRQGTGLIRTAIFSMLKYHAKLKAKKETRTKPLIIAFEEPEIYLHPSA
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCH
ANMLRDTIYSLGLSNQIISTTHSPWMIDLSKEWQSLTKVYLNKNGFMSTINYGVSEALKN
HHHHHHHHHHHCCCCCHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LEEDEKQHVKMIKTFDDELSRVFFAEKCLIVEGDSEQIAIKNTLNLLPEDVQKEIKSTFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEHHHHHCCCHHHHHHHHHHHH
ITKARGKAAIISLVKYLQALSINPIVMHDLDSQTEGAAKMNKHIEAAVGDTSRVFPLQDC
HHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH
LEDCLNYKVPTSDKPYRAFVETSKWASWDDVPPVWAAIIRSIFEINALEVS
HHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MKLSKVEIKNFRRVEHAEINLSPASFIIGPNNYGKSSILRAIDALLSLKEDVIKPDDFRL
CCCCHHHHHHHHHHHHCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
LPDGNRCQTIEICGWFSDIDPETANSRGFKGRVINGQFFYKKTYTLSNTTKPVIETFLYP
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCEEEEEEEEEECCCCHHHHHHHHCH
YQIVEPFDKVKTYTDLLGVGLTEEQIQESLGVKKVENKKLPNEWEFKIEGAIEWDMEAEP
HHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCEECCCCCCCCCCEEEEECEEEECCCCCC
QLFKNPGGAPSNVNSKLPRLLYIPSYANSDDVGKADSNKTLLGECLGYIFEDILADNQLA
HHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH
KDIQENLNELQKQMSPDTDESLIKVLCSEVNNIIGDVFPNCGIHINPSLQGLTEILKPKY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCC
SVEMYSNVNTDATRQGTGLIRTAIFSMLKYHAKLKAKKETRTKPLIIAFEEPEIYLHPSA
EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCH
ANMLRDTIYSLGLSNQIISTTHSPWMIDLSKEWQSLTKVYLNKNGFMSTINYGVSEALKN
HHHHHHHHHHHCCCCCHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LEEDEKQHVKMIKTFDDELSRVFFAEKCLIVEGDSEQIAIKNTLNLLPEDVQKEIKSTFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEHHHHHCCCHHHHHHHHHHHH
ITKARGKAAIISLVKYLQALSINPIVMHDLDSQTEGAAKMNKHIEAAVGDTSRVFPLQDC
HHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH
LEDCLNYKVPTSDKPYRAFVETSKWASWDDVPPVWAAIIRSIFEINALEVS
HHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA