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The map label for this gene is 134298737

Identifier: 134298737

GI number: 134298737

Start: 929836

End: 930657

Strand: Reverse

Name: 134298737

Synonym: Dred_0871

Alternate gene names: NA

Gene position: 930657-929836 (Counterclockwise)

Preceding gene: 134298738

Following gene: 134298736

Centisome position: 25.79

GC content: 29.93

Gene sequence:

>822_bases
ATGTTTAAAAAGTATATAAGCAATTCATACTTGAAAAAGTTTTCTTTTTTAACAATTCTATGGTTAGCCCTTACGGCCTC
AGGTGTGGTATTACTTTTTTATGGAGCAATTTCTATTCTTTCATTCTTATTCTCTAGTAACCATTCCTTACTAGAATTAA
TTGTAACTAGTTCCTTAGCATTTATAGGATTACCTCTTGGTTGGTTTCATTTTCATATAGCAAAACACCTTAAAAAATAC
ATTTCTACTCAAAAGAAAGGGTGGGAAGGAGAACAGTTATTCTATAAACTAGATTCATTAAATATAAAACATAAAAGACT
TACGGATCTTGATTTAATCACACCAGATGGTGAAAAATCACAAATTGATGCATTAATCATTCTCCCAAAGGTAGTTATCT
GTGTTGAAATTAAAAACCGGGCTTCTTATTATGTTGATAAAGATGGAAAATGGTACTCACTTAAATTTAAGAAATGGGTA
AACACAAGGAGTCCAATCGCCCAGAATGAATATCATTGCAAATTCATTAAAAGTTTATTATATAATAATGGTTTTTCTAC
AGATGTTTGGTCCTTAGTGGTACTTACGGATCCAAGAGGAGAGTATCGTTTAGAAAACCTAAAAGTACCACATAAAACTA
AGCTAATTACCCTTGATGAAGTAGGAAAGACAATTTATGAAATATCGTCATCATCTAAAGTAGATACCTTCTTAAATTTA
GATTCTATTGAAAACACTATCCTAAAGTATCAGGAGCCATTTGATTTTGAAAAAACCATTAAGAAAGAACTAGGGTATTT
TATAAAATATCTAATTGAGTAA

Upstream 100 bases:

>100_bases
AAAACTGAAACATCTCTGTTGTTCACTTAAGTGAACGCCTTCAACCATCAATAGGAGTTAATTTTTTATCTTTAATATTA
AATAATAATGGAGGAATTAA

Downstream 100 bases:

>100_bases
ATGATTTGGTTACACCATGTTATTTTTTCAGTTAATTTCCTGGTACCAGATAAAGAATTTAAAGAATTGATAAATAATTA
TCAGTTAACAAACAAAGAGC

Product: NERD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MFKKYISNSYLKKFSFLTILWLALTASGVVLLFYGAISILSFLFSSNHSLLELIVTSSLAFIGLPLGWFHFHIAKHLKKY
ISTQKKGWEGEQLFYKLDSLNIKHKRLTDLDLITPDGEKSQIDALIILPKVVICVEIKNRASYYVDKDGKWYSLKFKKWV
NTRSPIAQNEYHCKFIKSLLYNNGFSTDVWSLVVLTDPRGEYRLENLKVPHKTKLITLDEVGKTIYEISSSSKVDTFLNL
DSIENTILKYQEPFDFEKTIKKELGYFIKYLIE

Sequences:

>Translated_273_residues
MFKKYISNSYLKKFSFLTILWLALTASGVVLLFYGAISILSFLFSSNHSLLELIVTSSLAFIGLPLGWFHFHIAKHLKKY
ISTQKKGWEGEQLFYKLDSLNIKHKRLTDLDLITPDGEKSQIDALIILPKVVICVEIKNRASYYVDKDGKWYSLKFKKWV
NTRSPIAQNEYHCKFIKSLLYNNGFSTDVWSLVVLTDPRGEYRLENLKVPHKTKLITLDEVGKTIYEISSSSKVDTFLNL
DSIENTILKYQEPFDFEKTIKKELGYFIKYLIE
>Mature_273_residues
MFKKYISNSYLKKFSFLTILWLALTASGVVLLFYGAISILSFLFSSNHSLLELIVTSSLAFIGLPLGWFHFHIAKHLKKY
ISTQKKGWEGEQLFYKLDSLNIKHKRLTDLDLITPDGEKSQIDALIILPKVVICVEIKNRASYYVDKDGKWYSLKFKKWV
NTRSPIAQNEYHCKFIKSLLYNNGFSTDVWSLVVLTDPRGEYRLENLKVPHKTKLITLDEVGKTIYEISSSSKVDTFLNL
DSIENTILKYQEPFDFEKTIKKELGYFIKYLIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31737; Mature: 31737

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50965 NERD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKYISNSYLKKFSFLTILWLALTASGVVLLFYGAISILSFLFSSNHSLLELIVTSSLA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FIGLPLGWFHFHIAKHLKKYISTQKKGWEGEQLFYKLDSLNIKHKRLTDLDLITPDGEKS
HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCHHCCCCCEEECCCCCCH
QIDALIILPKVVICVEIKNRASYYVDKDGKWYSLKFKKWVNTRSPIAQNEYHCKFIKSLL
HHHEEEEECEEEEEEEECCCCCEEECCCCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHH
YNNGFSTDVWSLVVLTDPRGEYRLENLKVPHKTKLITLDEVGKTIYEISSSSKVDTFLNL
HCCCCCCCCEEEEEEECCCCCEECCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHEEEH
DSIENTILKYQEPFDFEKTIKKELGYFIKYLIE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFKKYISNSYLKKFSFLTILWLALTASGVVLLFYGAISILSFLFSSNHSLLELIVTSSLA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FIGLPLGWFHFHIAKHLKKYISTQKKGWEGEQLFYKLDSLNIKHKRLTDLDLITPDGEKS
HHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCHHCCCCCEEECCCCCCH
QIDALIILPKVVICVEIKNRASYYVDKDGKWYSLKFKKWVNTRSPIAQNEYHCKFIKSLL
HHHEEEEECEEEEEEEECCCCCEEECCCCCEEEEEEHHHCCCCCCCCCCCHHHHHHHHHH
YNNGFSTDVWSLVVLTDPRGEYRLENLKVPHKTKLITLDEVGKTIYEISSSSKVDTFLNL
HCCCCCCCCEEEEEEECCCCCEECCCCCCCCCEEEEEHHHHHHHHHHHCCCCCCHHEEEH
DSIENTILKYQEPFDFEKTIKKELGYFIKYLIE
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA