| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is mod [H]
Identifier: 134298735
GI number: 134298735
Start: 926154
End: 927671
Strand: Reverse
Name: mod [H]
Synonym: Dred_0869
Alternate gene names: 134298735
Gene position: 927671-926154 (Counterclockwise)
Preceding gene: 134298736
Following gene: 134298734
Centisome position: 25.71
GC content: 41.37
Gene sequence:
>1518_bases ATGCCAATATTACATTGGCTTGATCGTGACAAAACATTAACGATTGCTAATAAAATACCCTTTAGACTGTTGGAGGAGGA TCAGCAATACAGCTACGGAGATAATACACCAAATATGATAATTCAAGGGGACAACTTAGAGGCTCTCAAGGCCTTGTTAC CCTATTTTGCAGGTCAAGTTAAGTGTATATACATTGACCCGCCGTATAACATAGGAGCAGCCTTTGAACATTATGACGAC AACCTCGAACACTCACAATGGTTACAACTGATATACCCCCGGTTGGAATTGCTAAGAGAATTTTTAAGTCAAGACGGCAG TATCTGGGTGTCTATTGACGATAGCGAAGCCGCATATTTAAAGGTTATTATGGATGAAATTTTTGGTCGAAAGAGATTTA TTGCGTGTAATGTTTGGCAAAAACGTTATTCCCGTGAAAATCGAGAGGCTATTGGCGATGTTCATGAATATATTTTTACT TATGCAAAGAATCCAGATTTATTCAAAAAAACAAGGAACATGGTTCCGATTACTGAAAAGCAAGCAAAGGTGTACAGGAA TCCAAATAATGATCCATTAGGGCGTTGGAGACCAGTTCCAATGACTGCACAGGAAGGCCATGCAACTCCAGAACAATACT ATGAGGTAATTACACCAACAGGAAAAGTACATAAGCCACCAAAAGGACGATGCTGGGGAATTTCAAAAGCTACCTATGAA GACTTGCTTGCAAAAGGCCGCATTTATTTTGGGAAAACTGGAAATAGCCAGCCTAACATCATAAGATACATCTGGCAAGT GCCTGGTGTAGCCCCCTGGACATGGTGGCCTTCGGAAGAAGTTGGTCATACAGATGAGGCAAAAAAAGAGATTCATGCAC TTTTTGGTAAGATCAAGGCCTTTGACACACCAAAGCCTGAACGACTTATTCAAAGAATAATTCACATCGCAACAAACCCT GGGGATCTTATAATGGATTCATTTTTAGGATCTGGAACTACTGCAGCTGTTGCTCACAAAATGGGGCGGCGATATATTGG CGTGGAAATGGGAGAACAAGCAGTCACGCACGTAGTACCTCGACTCCAAAAAGTAGTAGAGGGAGAACAAGGGGGTATTT CTAATCCTGTAGATTGGCAAGGTGGTGGCGGTTTCCGTTTTTACCGCCTCGGTGAGCCAGTCTTTGACAGTGATGGCCAT TTGAACTCTTCTGTTAAGTTCCAGGCCCTTGCCGCCCATATATGGTTCACTGAAACTAAAATACCTTATCAAGGGCAGGC TGATTTACCACTTCTAGGAATTCATAATAATGTAGCTTATTATCTTCTATACAACGGCATACTTGGAGATAAACGTCCCA ATGGTGGTAACGTACTAACTAACAAACTTTTAGCTATTCTACCTCCCTATGATGGTGAGAAAGTTATATTTGGTGAAGCT ACACGTTTAGGTGAAGCTCGCCTACGTGAATTAGGGATTACATTTAAGCAAACACCCTACGATTTAAAGATGCGTTAG
Upstream 100 bases:
>100_bases TACGTAGAAATTCACTGTTAAATACAAATTACGTTAGAACTTATTTCTCATCTAAATAACTATGACCATACTCTACTGTA AGGTGATTGGAGGAATTTTA
Downstream 100 bases:
>100_bases GAGTAGATATAAATGCTTAAGTTAAAAAACTATCAAAGTCGTACTTTAACTAAACTCACTGAATTTCTTGAAAAATCTTG GATATTTTCTCCACAACAAG
Product: DNA methylase N-4/N-6 domain-containing protein
Products: NA
Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MPILHWLDRDKTLTIANKIPFRLLEEDQQYSYGDNTPNMIIQGDNLEALKALLPYFAGQVKCIYIDPPYNIGAAFEHYDD NLEHSQWLQLIYPRLELLREFLSQDGSIWVSIDDSEAAYLKVIMDEIFGRKRFIACNVWQKRYSRENREAIGDVHEYIFT YAKNPDLFKKTRNMVPITEKQAKVYRNPNNDPLGRWRPVPMTAQEGHATPEQYYEVITPTGKVHKPPKGRCWGISKATYE DLLAKGRIYFGKTGNSQPNIIRYIWQVPGVAPWTWWPSEEVGHTDEAKKEIHALFGKIKAFDTPKPERLIQRIIHIATNP GDLIMDSFLGSGTTAAVAHKMGRRYIGVEMGEQAVTHVVPRLQKVVEGEQGGISNPVDWQGGGGFRFYRLGEPVFDSDGH LNSSVKFQALAAHIWFTETKIPYQGQADLPLLGIHNNVAYYLLYNGILGDKRPNGGNVLTNKLLAILPPYDGEKVIFGEA TRLGEARLRELGITFKQTPYDLKMR
Sequences:
>Translated_505_residues MPILHWLDRDKTLTIANKIPFRLLEEDQQYSYGDNTPNMIIQGDNLEALKALLPYFAGQVKCIYIDPPYNIGAAFEHYDD NLEHSQWLQLIYPRLELLREFLSQDGSIWVSIDDSEAAYLKVIMDEIFGRKRFIACNVWQKRYSRENREAIGDVHEYIFT YAKNPDLFKKTRNMVPITEKQAKVYRNPNNDPLGRWRPVPMTAQEGHATPEQYYEVITPTGKVHKPPKGRCWGISKATYE DLLAKGRIYFGKTGNSQPNIIRYIWQVPGVAPWTWWPSEEVGHTDEAKKEIHALFGKIKAFDTPKPERLIQRIIHIATNP GDLIMDSFLGSGTTAAVAHKMGRRYIGVEMGEQAVTHVVPRLQKVVEGEQGGISNPVDWQGGGGFRFYRLGEPVFDSDGH LNSSVKFQALAAHIWFTETKIPYQGQADLPLLGIHNNVAYYLLYNGILGDKRPNGGNVLTNKLLAILPPYDGEKVIFGEA TRLGEARLRELGITFKQTPYDLKMR >Mature_504_residues PILHWLDRDKTLTIANKIPFRLLEEDQQYSYGDNTPNMIIQGDNLEALKALLPYFAGQVKCIYIDPPYNIGAAFEHYDDN LEHSQWLQLIYPRLELLREFLSQDGSIWVSIDDSEAAYLKVIMDEIFGRKRFIACNVWQKRYSRENREAIGDVHEYIFTY AKNPDLFKKTRNMVPITEKQAKVYRNPNNDPLGRWRPVPMTAQEGHATPEQYYEVITPTGKVHKPPKGRCWGISKATYED LLAKGRIYFGKTGNSQPNIIRYIWQVPGVAPWTWWPSEEVGHTDEAKKEIHALFGKIKAFDTPKPERLIQRIIHIATNPG DLIMDSFLGSGTTAAVAHKMGRRYIGVEMGEQAVTHVVPRLQKVVEGEQGGISNPVDWQGGGGFRFYRLGEPVFDSDGHL NSSVKFQALAAHIWFTETKIPYQGQADLPLLGIHNNVAYYLLYNGILGDKRPNGGNVLTNKLLAILPPYDGEKVIFGEAT RLGEARLRELGITFKQTPYDLKMR
Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 57591; Mature: 57460
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILHWLDRDKTLTIANKIPFRLLEEDQQYSYGDNTPNMIIQGDNLEALKALLPYFAGQV CCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCE KCIYIDPPYNIGAAFEHYDDNLEHSQWLQLIYPRLELLREFLSQDGSIWVSIDDSEAAYL EEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH KVIMDEIFGRKRFIACNVWQKRYSRENREAIGDVHEYIFTYAKNPDLFKKTRNMVPITEK HHHHHHHHCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHH QAKVYRNPNNDPLGRWRPVPMTAQEGHATPEQYYEVITPTGKVHKPPKGRCWGISKATYE HHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCEECCCHHHHH DLLAKGRIYFGKTGNSQPNIIRYIWQVPGVAPWTWWPSEEVGHTDEAKKEIHALFGKIKA HHHHCCCEEEECCCCCCCHHHHHEECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHC FDTPKPERLIQRIIHIATNPGDLIMDSFLGSGTTAAVAHKMGRRYIGVEMGEQAVTHVVP CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCEEECHHHHHHHHHHHHH RLQKVVEGEQGGISNPVDWQGGGGFRFYRLGEPVFDSDGHLNSSVKFQALAAHIWFTETK HHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECC IPYQGQADLPLLGIHNNVAYYLLYNGILGDKRPNGGNVLTNKLLAILPPYDGEKVIFGEA CCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCHHHCCEEEEECCCCCCEEEECCC TRLGEARLRELGITFKQTPYDLKMR HHHHHHHHHHHCCEEECCCCCCCCC >Mature Secondary Structure PILHWLDRDKTLTIANKIPFRLLEEDQQYSYGDNTPNMIIQGDNLEALKALLPYFAGQV CCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCE KCIYIDPPYNIGAAFEHYDDNLEHSQWLQLIYPRLELLREFLSQDGSIWVSIDDSEAAYL EEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH KVIMDEIFGRKRFIACNVWQKRYSRENREAIGDVHEYIFTYAKNPDLFKKTRNMVPITEK HHHHHHHHCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHH QAKVYRNPNNDPLGRWRPVPMTAQEGHATPEQYYEVITPTGKVHKPPKGRCWGISKATYE HHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCEECCCHHHHH DLLAKGRIYFGKTGNSQPNIIRYIWQVPGVAPWTWWPSEEVGHTDEAKKEIHALFGKIKA HHHHCCCEEEECCCCCCCHHHHHEECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHC FDTPKPERLIQRIIHIATNPGDLIMDSFLGSGTTAAVAHKMGRRYIGVEMGEQAVTHVVP CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCEEECHHHHHHHHHHHHH RLQKVVEGEQGGISNPVDWQGGGGFRFYRLGEPVFDSDGHLNSSVKFQALAAHIWFTETK HHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECC IPYQGQADLPLLGIHNNVAYYLLYNGILGDKRPNGGNVLTNKLLAILPPYDGEKVIFGEA CCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCHHHCCEEEEECCCCCCEEEECCC TRLGEARLRELGITFKQTPYDLKMR HHHHHHHHHHHCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387444; 11677609 [H]