Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is mod [H]

Identifier: 134298735

GI number: 134298735

Start: 926154

End: 927671

Strand: Reverse

Name: mod [H]

Synonym: Dred_0869

Alternate gene names: 134298735

Gene position: 927671-926154 (Counterclockwise)

Preceding gene: 134298736

Following gene: 134298734

Centisome position: 25.71

GC content: 41.37

Gene sequence:

>1518_bases
ATGCCAATATTACATTGGCTTGATCGTGACAAAACATTAACGATTGCTAATAAAATACCCTTTAGACTGTTGGAGGAGGA
TCAGCAATACAGCTACGGAGATAATACACCAAATATGATAATTCAAGGGGACAACTTAGAGGCTCTCAAGGCCTTGTTAC
CCTATTTTGCAGGTCAAGTTAAGTGTATATACATTGACCCGCCGTATAACATAGGAGCAGCCTTTGAACATTATGACGAC
AACCTCGAACACTCACAATGGTTACAACTGATATACCCCCGGTTGGAATTGCTAAGAGAATTTTTAAGTCAAGACGGCAG
TATCTGGGTGTCTATTGACGATAGCGAAGCCGCATATTTAAAGGTTATTATGGATGAAATTTTTGGTCGAAAGAGATTTA
TTGCGTGTAATGTTTGGCAAAAACGTTATTCCCGTGAAAATCGAGAGGCTATTGGCGATGTTCATGAATATATTTTTACT
TATGCAAAGAATCCAGATTTATTCAAAAAAACAAGGAACATGGTTCCGATTACTGAAAAGCAAGCAAAGGTGTACAGGAA
TCCAAATAATGATCCATTAGGGCGTTGGAGACCAGTTCCAATGACTGCACAGGAAGGCCATGCAACTCCAGAACAATACT
ATGAGGTAATTACACCAACAGGAAAAGTACATAAGCCACCAAAAGGACGATGCTGGGGAATTTCAAAAGCTACCTATGAA
GACTTGCTTGCAAAAGGCCGCATTTATTTTGGGAAAACTGGAAATAGCCAGCCTAACATCATAAGATACATCTGGCAAGT
GCCTGGTGTAGCCCCCTGGACATGGTGGCCTTCGGAAGAAGTTGGTCATACAGATGAGGCAAAAAAAGAGATTCATGCAC
TTTTTGGTAAGATCAAGGCCTTTGACACACCAAAGCCTGAACGACTTATTCAAAGAATAATTCACATCGCAACAAACCCT
GGGGATCTTATAATGGATTCATTTTTAGGATCTGGAACTACTGCAGCTGTTGCTCACAAAATGGGGCGGCGATATATTGG
CGTGGAAATGGGAGAACAAGCAGTCACGCACGTAGTACCTCGACTCCAAAAAGTAGTAGAGGGAGAACAAGGGGGTATTT
CTAATCCTGTAGATTGGCAAGGTGGTGGCGGTTTCCGTTTTTACCGCCTCGGTGAGCCAGTCTTTGACAGTGATGGCCAT
TTGAACTCTTCTGTTAAGTTCCAGGCCCTTGCCGCCCATATATGGTTCACTGAAACTAAAATACCTTATCAAGGGCAGGC
TGATTTACCACTTCTAGGAATTCATAATAATGTAGCTTATTATCTTCTATACAACGGCATACTTGGAGATAAACGTCCCA
ATGGTGGTAACGTACTAACTAACAAACTTTTAGCTATTCTACCTCCCTATGATGGTGAGAAAGTTATATTTGGTGAAGCT
ACACGTTTAGGTGAAGCTCGCCTACGTGAATTAGGGATTACATTTAAGCAAACACCCTACGATTTAAAGATGCGTTAG

Upstream 100 bases:

>100_bases
TACGTAGAAATTCACTGTTAAATACAAATTACGTTAGAACTTATTTCTCATCTAAATAACTATGACCATACTCTACTGTA
AGGTGATTGGAGGAATTTTA

Downstream 100 bases:

>100_bases
GAGTAGATATAAATGCTTAAGTTAAAAAACTATCAAAGTCGTACTTTAACTAAACTCACTGAATTTCTTGAAAAATCTTG
GATATTTTCTCCACAACAAG

Product: DNA methylase N-4/N-6 domain-containing protein

Products: NA

Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MPILHWLDRDKTLTIANKIPFRLLEEDQQYSYGDNTPNMIIQGDNLEALKALLPYFAGQVKCIYIDPPYNIGAAFEHYDD
NLEHSQWLQLIYPRLELLREFLSQDGSIWVSIDDSEAAYLKVIMDEIFGRKRFIACNVWQKRYSRENREAIGDVHEYIFT
YAKNPDLFKKTRNMVPITEKQAKVYRNPNNDPLGRWRPVPMTAQEGHATPEQYYEVITPTGKVHKPPKGRCWGISKATYE
DLLAKGRIYFGKTGNSQPNIIRYIWQVPGVAPWTWWPSEEVGHTDEAKKEIHALFGKIKAFDTPKPERLIQRIIHIATNP
GDLIMDSFLGSGTTAAVAHKMGRRYIGVEMGEQAVTHVVPRLQKVVEGEQGGISNPVDWQGGGGFRFYRLGEPVFDSDGH
LNSSVKFQALAAHIWFTETKIPYQGQADLPLLGIHNNVAYYLLYNGILGDKRPNGGNVLTNKLLAILPPYDGEKVIFGEA
TRLGEARLRELGITFKQTPYDLKMR

Sequences:

>Translated_505_residues
MPILHWLDRDKTLTIANKIPFRLLEEDQQYSYGDNTPNMIIQGDNLEALKALLPYFAGQVKCIYIDPPYNIGAAFEHYDD
NLEHSQWLQLIYPRLELLREFLSQDGSIWVSIDDSEAAYLKVIMDEIFGRKRFIACNVWQKRYSRENREAIGDVHEYIFT
YAKNPDLFKKTRNMVPITEKQAKVYRNPNNDPLGRWRPVPMTAQEGHATPEQYYEVITPTGKVHKPPKGRCWGISKATYE
DLLAKGRIYFGKTGNSQPNIIRYIWQVPGVAPWTWWPSEEVGHTDEAKKEIHALFGKIKAFDTPKPERLIQRIIHIATNP
GDLIMDSFLGSGTTAAVAHKMGRRYIGVEMGEQAVTHVVPRLQKVVEGEQGGISNPVDWQGGGGFRFYRLGEPVFDSDGH
LNSSVKFQALAAHIWFTETKIPYQGQADLPLLGIHNNVAYYLLYNGILGDKRPNGGNVLTNKLLAILPPYDGEKVIFGEA
TRLGEARLRELGITFKQTPYDLKMR
>Mature_504_residues
PILHWLDRDKTLTIANKIPFRLLEEDQQYSYGDNTPNMIIQGDNLEALKALLPYFAGQVKCIYIDPPYNIGAAFEHYDDN
LEHSQWLQLIYPRLELLREFLSQDGSIWVSIDDSEAAYLKVIMDEIFGRKRFIACNVWQKRYSRENREAIGDVHEYIFTY
AKNPDLFKKTRNMVPITEKQAKVYRNPNNDPLGRWRPVPMTAQEGHATPEQYYEVITPTGKVHKPPKGRCWGISKATYED
LLAKGRIYFGKTGNSQPNIIRYIWQVPGVAPWTWWPSEEVGHTDEAKKEIHALFGKIKAFDTPKPERLIQRIIHIATNPG
DLIMDSFLGSGTTAAVAHKMGRRYIGVEMGEQAVTHVVPRLQKVVEGEQGGISNPVDWQGGGGFRFYRLGEPVFDSDGHL
NSSVKFQALAAHIWFTETKIPYQGQADLPLLGIHNNVAYYLLYNGILGDKRPNGGNVLTNKLLAILPPYDGEKVIFGEAT
RLGEARLRELGITFKQTPYDLKMR

Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]

COG id: COG2189

COG function: function code L; Adenine specific DNA methylase Mod

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002295
- InterPro:   IPR002941
- InterPro:   IPR002052 [H]

Pfam domain/function: PF01555 N6_N4_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 57591; Mature: 57460

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILHWLDRDKTLTIANKIPFRLLEEDQQYSYGDNTPNMIIQGDNLEALKALLPYFAGQV
CCCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCE
KCIYIDPPYNIGAAFEHYDDNLEHSQWLQLIYPRLELLREFLSQDGSIWVSIDDSEAAYL
EEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
KVIMDEIFGRKRFIACNVWQKRYSRENREAIGDVHEYIFTYAKNPDLFKKTRNMVPITEK
HHHHHHHHCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHH
QAKVYRNPNNDPLGRWRPVPMTAQEGHATPEQYYEVITPTGKVHKPPKGRCWGISKATYE
HHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCEECCCHHHHH
DLLAKGRIYFGKTGNSQPNIIRYIWQVPGVAPWTWWPSEEVGHTDEAKKEIHALFGKIKA
HHHHCCCEEEECCCCCCCHHHHHEECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHC
FDTPKPERLIQRIIHIATNPGDLIMDSFLGSGTTAAVAHKMGRRYIGVEMGEQAVTHVVP
CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCEEECHHHHHHHHHHHHH
RLQKVVEGEQGGISNPVDWQGGGGFRFYRLGEPVFDSDGHLNSSVKFQALAAHIWFTETK
HHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECC
IPYQGQADLPLLGIHNNVAYYLLYNGILGDKRPNGGNVLTNKLLAILPPYDGEKVIFGEA
CCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCHHHCCEEEEECCCCCCEEEECCC
TRLGEARLRELGITFKQTPYDLKMR
HHHHHHHHHHHCCEEECCCCCCCCC
>Mature Secondary Structure 
PILHWLDRDKTLTIANKIPFRLLEEDQQYSYGDNTPNMIIQGDNLEALKALLPYFAGQV
CCCCCCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCE
KCIYIDPPYNIGAAFEHYDDNLEHSQWLQLIYPRLELLREFLSQDGSIWVSIDDSEAAYL
EEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
KVIMDEIFGRKRFIACNVWQKRYSRENREAIGDVHEYIFTYAKNPDLFKKTRNMVPITEK
HHHHHHHHCCCEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHH
QAKVYRNPNNDPLGRWRPVPMTAQEGHATPEQYYEVITPTGKVHKPPKGRCWGISKATYE
HHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCEECCCHHHHH
DLLAKGRIYFGKTGNSQPNIIRYIWQVPGVAPWTWWPSEEVGHTDEAKKEIHALFGKIKA
HHHHCCCEEEECCCCCCCHHHHHEECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHC
FDTPKPERLIQRIIHIATNPGDLIMDSFLGSGTTAAVAHKMGRRYIGVEMGEQAVTHVVP
CCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHCCEEECHHHHHHHHHHHHH
RLQKVVEGEQGGISNPVDWQGGGGFRFYRLGEPVFDSDGHLNSSVKFQALAAHIWFTETK
HHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECC
IPYQGQADLPLLGIHNNVAYYLLYNGILGDKRPNGGNVLTNKLLAILPPYDGEKVIFGEA
CCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCHHHCCEEEEECCCCCCEEEECCC
TRLGEARLRELGITFKQTPYDLKMR
HHHHHHHHHHHCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387444; 11677609 [H]