| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is pabC [C]
Identifier: 126697222
GI number: 126697222
Start: 1611400
End: 1612227
Strand: Direct
Name: pabC [C]
Synonym: P9301_18841
Alternate gene names: 126697222
Gene position: 1611400-1612227 (Clockwise)
Preceding gene: 126697221
Following gene: 126697224
Centisome position: 98.14
GC content: 28.14
Gene sequence:
>828_bases ATGATTGATACATTAGGCTGGTACAAGGATCAATGGTTGGATATTGATAGAATATTTATTGCTGCTAATAATAGAGGATT AAAATTTGCTGATGGTATATTTGAAACCATTTTGATAAAAGAAAATAAACCTATTCTTTTAGATGACCATCTGAAAAGGT TAGAAAAAAGTAGCAAGATTTTAAATATTAATCTCAAAATAAATAAATTAACTTTGAGACAACTTATTAACGATGGAATT AGAAAGTTATCGCTTAAAAATGATCAATTTGCTTCAGTAAGAATAAACTATAGTCGAGGAACTAATAAAGGTAGAACACT AACAATTGATAGCACTTCAAAGACAAAAGATTTGGATAATTTATGGCTTGAGTTCTATAAAATAGAGCCAAATTTTAATC CGATAAGTGTTTGCATTAGTCAAAGGGAAAAAATAAATGAATTTAGTCTTATAAGTAAATGCAAAACATTTTCATATAAT CAGGCAATACAAGTTTTGACAGAAGCTCATGAAAAATCATTTGATGATTCTATCCTTTTGAATACGTCAGGTGAACTTTG TTGTGGAAGTACATTTAATCTTCTAATTAAAAGAAATAATCAATGGATAACTCCTAGAAAAGAGAGCGGCTGTTTAGAGG GGATTATGGTTTCTAAAGCTTTAAGATTGAAAATTGTCAAAGAAGAATTAATTGTTCCAGAATTTCAAAATGATGACATA ATATTTGCAATTAATAGCTTATCTTGCAGACAAATTTATCAAGTCAATGATTTAAAGCTTTACCCTAAACTCGATCCAAT TTACTTTTGGGACTTATTGTATAGTTGA
Upstream 100 bases:
>100_bases TCAGTATATATGCTGGTTGCGGAATAGTTATTGACTCAAACCTTGAAGAGGAAACTAATGAACTAAAGTGGAAACTTTTA CCGTTAATTGATTCACTAAA
Downstream 100 bases:
>100_bases ACTTTATTAATATCTGGTAAATCGACATCAGATACTTTCGTTATATCGTTATTAACCTTAAATTCAACAATTTTTCCAAT AATGATAATCGATGGAGATA
Product: aminotransferases class-IV
Products: p-aminobenzoate; L-glutamate; pyruvate; p-aminobenzoate [C]
Alternate protein names: Aminotransferases Class-IV; Aminotransferase; Aminotransferase Class-IV; 4-Amino-4-Deoxychorismate Lyase; Branched-Chain Amino Acid Aminotransferase; Class IV Aminotransferase; Aminodeoxychorismate Lyase
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MIDTLGWYKDQWLDIDRIFIAANNRGLKFADGIFETILIKENKPILLDDHLKRLEKSSKILNINLKINKLTLRQLINDGI RKLSLKNDQFASVRINYSRGTNKGRTLTIDSTSKTKDLDNLWLEFYKIEPNFNPISVCISQREKINEFSLISKCKTFSYN QAIQVLTEAHEKSFDDSILLNTSGELCCGSTFNLLIKRNNQWITPRKESGCLEGIMVSKALRLKIVKEELIVPEFQNDDI IFAINSLSCRQIYQVNDLKLYPKLDPIYFWDLLYS
Sequences:
>Translated_275_residues MIDTLGWYKDQWLDIDRIFIAANNRGLKFADGIFETILIKENKPILLDDHLKRLEKSSKILNINLKINKLTLRQLINDGI RKLSLKNDQFASVRINYSRGTNKGRTLTIDSTSKTKDLDNLWLEFYKIEPNFNPISVCISQREKINEFSLISKCKTFSYN QAIQVLTEAHEKSFDDSILLNTSGELCCGSTFNLLIKRNNQWITPRKESGCLEGIMVSKALRLKIVKEELIVPEFQNDDI IFAINSLSCRQIYQVNDLKLYPKLDPIYFWDLLYS >Mature_275_residues MIDTLGWYKDQWLDIDRIFIAANNRGLKFADGIFETILIKENKPILLDDHLKRLEKSSKILNINLKINKLTLRQLINDGI RKLSLKNDQFASVRINYSRGTNKGRTLTIDSTSKTKDLDNLWLEFYKIEPNFNPISVCISQREKINEFSLISKCKTFSYN QAIQVLTEAHEKSFDDSILLNTSGELCCGSTFNLLIKRNNQWITPRKESGCLEGIMVSKALRLKIVKEELIVPEFQNDDI IFAINSLSCRQIYQVNDLKLYPKLDPIYFWDLLYS
Specific function: Converts 4-Amino-4-Deoxychorismate Into 4-Aminobenzoate (Paba) And Pyruvate. [C]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.3.38 [C]
Molecular weight: Translated: 31952; Mature: 31952
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTLGWYKDQWLDIDRIFIAANNRGLKFADGIFETILIKENKPILLDDHLKRLEKSSKI CCCCCCCCCCCCCCEEEEEEEECCCCCCHHHCCEEEEEEECCCCEEEHHHHHHHHCCCCE LNINLKINKLTLRQLINDGIRKLSLKNDQFASVRINYSRGTNKGRTLTIDSTSKTKDLDN EEEEEEEEHHHHHHHHHHHHHEEECCCCCEEEEEEEECCCCCCCCEEEEECCCCCCHHHH LWLEFYKIEPNFNPISVCISQREKINEFSLISKCKTFSYNQAIQVLTEAHEKSFDDSILL EEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEE NTSGELCCGSTFNLLIKRNNQWITPRKESGCLEGIMVSKALRLKIVKEELIVPEFQNDDI ECCCCEEECCCEEEEEEECCCEECCCCCCCCHHHHHHHHHHHEEEEHHHHCCCCCCCCCE IFAINSLSCRQIYQVNDLKLYPKLDPIYFWDLLYS EEEECCCCCEEEEEECCEEECCCCCCEEEEEECCC >Mature Secondary Structure MIDTLGWYKDQWLDIDRIFIAANNRGLKFADGIFETILIKENKPILLDDHLKRLEKSSKI CCCCCCCCCCCCCCEEEEEEEECCCCCCHHHCCEEEEEEECCCCEEEHHHHHHHHCCCCE LNINLKINKLTLRQLINDGIRKLSLKNDQFASVRINYSRGTNKGRTLTIDSTSKTKDLDN EEEEEEEEHHHHHHHHHHHHHEEECCCCCEEEEEEEECCCCCCCCEEEEECCCCCCHHHH LWLEFYKIEPNFNPISVCISQREKINEFSLISKCKTFSYNQAIQVLTEAHEKSFDDSILL EEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEE NTSGELCCGSTFNLLIKRNNQWITPRKESGCLEGIMVSKALRLKIVKEELIVPEFQNDDI ECCCCEEECCCEEEEEEECCCEECCCCCCCCHHHHHHHHHHHEEEEHHHHCCCCCCCCCE IFAINSLSCRQIYQVNDLKLYPKLDPIYFWDLLYS EEEECCCCCEEEEEECCEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamine; chorismate; 4-amino-4-deoxychorismate [C]
Specific reaction: L-glutamine + chorismate = p-aminobenzoate + L-glutamate + pyruvate 4-amino-4-deoxychorismate = p-aminobenzoate + pyruvate [C]
General reaction: Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA