| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is pgl [H]
Identifier: 126696169
GI number: 126696169
Start: 722920
End: 723657
Strand: Direct
Name: pgl [H]
Synonym: P9301_08311
Alternate gene names: 126696169
Gene position: 722920-723657 (Clockwise)
Preceding gene: 126696168
Following gene: 126696170
Centisome position: 44.03
GC content: 28.59
Gene sequence:
>738_bases ATGGATGAAATGATTGAAAAGGTCAAAAATGGATACACCATAAATTTATACAAAGACAAATTAGAACTATCAACAGCTGT TTTTAAGTTTATTGAAAGTCATATTATCCATACTTTAAAAAAGAAAGACAGGTTCAAATTTTGTGTAAGTGGAGGTTCAA CTCCTAAATCTGTTTATAAGCTTTTATCAAAAAGTGATCTTAGATGGGATATGGTTGATGTCTTTTTAGGGGATGAAAGA TGTGTTGATCCAAATTCAGAATTGAGTAACTCGTTAATGTTGAAGAATTCATTGTTAAAAAATTTTGGATCGAAAGCTTT TTTTTATGAAATTTTCAATGATTTAAATGCTGATGATGAAGCTACAAAGAATCAATTTGTTTCTAAATTATTTGAAAAAT GCGGATCAAACCCTCCAACTTTTGATTTAACATTATTAGGTCTCGGAGACGATGGTCATACAGCCTCACTATTTCCTTAT CAAAAAAATAATAATGTAGATGATTTTGTTATTTTTAATGATGGTAAAGGTTTAAAAAGAATTTCACTAACTCCAAAGGT TCTATCAGCCTCATCAAAGATTGTATTTTTAGTAAGTGGAGCTTCTAAAAGAATTGCTCTTGAGAGGTTATTAGATGAAA AAGAGTCACCAGATAGAACACCATCAAAATTAATAAAATCTATTAATCAAATTTCAATATTTTGTGATCTGGAATCAGCA AAAGAATTAGAAATTTAG
Upstream 100 bases:
>100_bases GAACCAATAGACTTCCTCAGAATCTCGTTCAGGCAATGAGAGACTGTTTTGGCTCTCATACATATGAAAGAATTGATAAG AAAGGTAGTTTTCATACTGA
Downstream 100 bases:
>100_bases TTAAAGTCTAGTAATAATTAAAAATATTCAATGAGTAAGAAAAAATTTTTATTTCAGAAAAAAGAGTTCGATGGTTGGAA AACATTAAATGATACTGTTA
Product: putative 6-phosphogluconolactonase (DevB, Pgl)
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MDEMIEKVKNGYTINLYKDKLELSTAVFKFIESHIIHTLKKKDRFKFCVSGGSTPKSVYKLLSKSDLRWDMVDVFLGDER CVDPNSELSNSLMLKNSLLKNFGSKAFFYEIFNDLNADDEATKNQFVSKLFEKCGSNPPTFDLTLLGLGDDGHTASLFPY QKNNNVDDFVIFNDGKGLKRISLTPKVLSASSKIVFLVSGASKRIALERLLDEKESPDRTPSKLIKSINQISIFCDLESA KELEI
Sequences:
>Translated_245_residues MDEMIEKVKNGYTINLYKDKLELSTAVFKFIESHIIHTLKKKDRFKFCVSGGSTPKSVYKLLSKSDLRWDMVDVFLGDER CVDPNSELSNSLMLKNSLLKNFGSKAFFYEIFNDLNADDEATKNQFVSKLFEKCGSNPPTFDLTLLGLGDDGHTASLFPY QKNNNVDDFVIFNDGKGLKRISLTPKVLSASSKIVFLVSGASKRIALERLLDEKESPDRTPSKLIKSINQISIFCDLESA KELEI >Mature_245_residues MDEMIEKVKNGYTINLYKDKLELSTAVFKFIESHIIHTLKKKDRFKFCVSGGSTPKSVYKLLSKSDLRWDMVDVFLGDER CVDPNSELSNSLMLKNSLLKNFGSKAFFYEIFNDLNADDEATKNQFVSKLFEKCGSNPPTFDLTLLGLGDDGHTASLFPY QKNNNVDDFVIFNDGKGLKRISLTPKVLSASSKIVFLVSGASKRIALERLLDEKESPDRTPSKLIKSINQISIFCDLESA KELEI
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=196, Percent_Identity=28.0612244897959, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115533058, Length=242, Percent_Identity=26.0330578512397, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115533060, Length=242, Percent_Identity=26.0330578512397, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321957, Length=230, Percent_Identity=27.8260869565217, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6319918, Length=209, Percent_Identity=30.1435406698565, Blast_Score=76, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6324362, Length=216, Percent_Identity=28.7037037037037, Blast_Score=76, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6321687, Length=219, Percent_Identity=30.5936073059361, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 27645; Mature: 27645
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEMIEKVKNGYTINLYKDKLELSTAVFKFIESHIIHTLKKKDRFKFCVSGGSTPKSVYK CCHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH LLSKSDLRWDMVDVFLGDERCVDPNSELSNSLMLKNSLLKNFGSKAFFYEIFNDLNADDE HHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCH ATKNQFVSKLFEKCGSNPPTFDLTLLGLGDDGHTASLFPYQKNNNVDDFVIFNDGKGLKR HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCEE ISLTPKVLSASSKIVFLVSGASKRIALERLLDEKESPDRTPSKLIKSINQISIFCDLESA EECCHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEEECCCC KELEI CCCCC >Mature Secondary Structure MDEMIEKVKNGYTINLYKDKLELSTAVFKFIESHIIHTLKKKDRFKFCVSGGSTPKSVYK CCHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH LLSKSDLRWDMVDVFLGDERCVDPNSELSNSLMLKNSLLKNFGSKAFFYEIFNDLNADDE HHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCH ATKNQFVSKLFEKCGSNPPTFDLTLLGLGDDGHTASLFPYQKNNNVDDFVIFNDGKGLKR HHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCCEE ISLTPKVLSASSKIVFLVSGASKRIALERLLDEKESPDRTPSKLIKSINQISIFCDLESA EECCHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEEEEECCCC KELEI CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]