| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126696170
Identifier: 126696170
GI number: 126696170
Start: 723688
End: 724236
Strand: Direct
Name: 126696170
Synonym: P9301_08321
Alternate gene names: NA
Gene position: 723688-724236 (Clockwise)
Preceding gene: 126696169
Following gene: 126696171
Centisome position: 44.08
GC content: 30.24
Gene sequence:
>549_bases ATGAGTAAGAAAAAATTTTTATTTCAGAAAAAAGAGTTCGATGGTTGGAAAACATTAAATGATACTGTTATGGGCGGATC AAGTTCAGCTTTTTGTGAAATTTCAAATTCGGGTTTGATATTAAAGGGTAATATTGTCGAGAAAGCAGGAGGATTTGTTA GCTGTAGATCGTCTATATATAAACCTTCTTTAAATGTATCTGAGTATTCATCCTTTGAATTAAATATTGATGGACAAGGA AGAACTTTTAAATTTGCTGTCGCTTGTGAAGATGATCTACTAGGACTAACTGAATTTATTCCGGGTGGACTTAGATGGAT TAAATCATTCCCAACAAAAAAATTCGGGACAACAAATGTTCAAATTCCTTATAGTGATTTAAAACCTTCAGTAAGAGCTA ATAAAGTACGTTTTCCATTTAAATTTAAGCCATCTAAAATTAAAAGATTGCAACTACTACACTCTAAGTTCGGTGATGAT GGATTACTTAATAATGAGTTTAAACAGGGTTCTATAAAAGTTTTAATTAAATCAATAAGTGTTATTTGA
Upstream 100 bases:
>100_bases ATTAATAAAATCTATTAATCAAATTTCAATATTTTGTGATCTGGAATCAGCAAAAGAATTAGAAATTTAGTTAAAGTCTA GTAATAATTAAAAATATTCA
Downstream 100 bases:
>100_bases AAATCCACCAAAAAATATAGAGAGCTTAATCGCTAAGTCAGCAGATTTAACAAATAAACCTTTTGTTCATTCTGTAGTAA AAATAAATGGTGAATACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSKKKFLFQKKEFDGWKTLNDTVMGGSSSAFCEISNSGLILKGNIVEKAGGFVSCRSSIYKPSLNVSEYSSFELNIDGQG RTFKFAVACEDDLLGLTEFIPGGLRWIKSFPTKKFGTTNVQIPYSDLKPSVRANKVRFPFKFKPSKIKRLQLLHSKFGDD GLLNNEFKQGSIKVLIKSISVI
Sequences:
>Translated_182_residues MSKKKFLFQKKEFDGWKTLNDTVMGGSSSAFCEISNSGLILKGNIVEKAGGFVSCRSSIYKPSLNVSEYSSFELNIDGQG RTFKFAVACEDDLLGLTEFIPGGLRWIKSFPTKKFGTTNVQIPYSDLKPSVRANKVRFPFKFKPSKIKRLQLLHSKFGDD GLLNNEFKQGSIKVLIKSISVI >Mature_181_residues SKKKFLFQKKEFDGWKTLNDTVMGGSSSAFCEISNSGLILKGNIVEKAGGFVSCRSSIYKPSLNVSEYSSFELNIDGQGR TFKFAVACEDDLLGLTEFIPGGLRWIKSFPTKKFGTTNVQIPYSDLKPSVRANKVRFPFKFKPSKIKRLQLLHSKFGDDG LLNNEFKQGSIKVLIKSISVI
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20321; Mature: 20190
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKKFLFQKKEFDGWKTLNDTVMGGSSSAFCEISNSGLILKGNIVEKAGGFVSCRSSIY CCCCCCEEECCCCCCCCCCCCEEECCCCCEEEEECCCCEEEECCCHHHCCCEEEEHHHHC KPSLNVSEYSSFELNIDGQGRTFKFAVACEDDLLGLTEFIPGGLRWIKSFPTKKFGTTNV CCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHCCHHHHHHHHCCCCCCCCCEE QIPYSDLKPSVRANKVRFPFKFKPSKIKRLQLLHSKFGDDGLLNNEFKQGSIKVLIKSIS EEEHHHCCCCCCCCEEECCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEHHH VI CC >Mature Secondary Structure SKKKFLFQKKEFDGWKTLNDTVMGGSSSAFCEISNSGLILKGNIVEKAGGFVSCRSSIY CCCCCEEECCCCCCCCCCCCEEECCCCCEEEEECCCCEEEECCCHHHCCCEEEEHHHHC KPSLNVSEYSSFELNIDGQGRTFKFAVACEDDLLGLTEFIPGGLRWIKSFPTKKFGTTNV CCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHCCHHHHHHHHCCCCCCCCCEE QIPYSDLKPSVRANKVRFPFKFKPSKIKRLQLLHSKFGDDGLLNNEFKQGSIKVLIKSIS EEEHHHCCCCCCCCEEECCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEEEHHH VI CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA