| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is cinA [C]
Identifier: 126695618
GI number: 126695618
Start: 256302
End: 257576
Strand: Reverse
Name: cinA [C]
Synonym: P9301_02801
Alternate gene names: 126695618
Gene position: 257576-256302 (Counterclockwise)
Preceding gene: 126695619
Following gene: 126695617
Centisome position: 15.69
GC content: 33.1
Gene sequence:
>1275_bases ATGAGTCCTAACTCCAAGGGAGTTGAAATTCTTTCTATTGGAACAGAGCTACTCTTAGGAAATATCATAAATACAAATGC TCAATGGATTTCTGAACAGTTATCTCAATTAGGCTTAAATCACTTTAGGCAATCAACTGTAGGTGATAATTGTGATCGAA TTGTAAGAGTAATTCAAGAAATATCGAAAAGAAGTAATCTTCTAATTACAACTGGTGGCTTAGGACCCACCCCAGATGAC TTAACTACTGAAGCAATAGCCAAATCTTTTAATGTAACTCTTTTTGAAAGACCGCACTTATGGGACGAAATTAAACAAAA ATTGCCAAACTCAAAGCTCCATGAAGATTCCTCTAGCTTAAGGAAACAATGTTTTTTCCCAAAAAATGCTCAAATAATTA ATAACCCTAGGGGCACTGCCCCAGGAATGATATGGGAACCAATAAAAGGATTTACTATTCTTACATTCCCTGGAGTACCT AGTGAAATGAAAACTATGTGGGAAGAAACGGCGTATGATTTCATTCAAACCAAATTTTCAGATACTTATTCCTTTTTTTC AAATACCCTTAAATTTGCAGGTATTGGAGAATCTAGTGTTGCAGAAAAAATTAACGATCTATTAAATCTTAAAAACCCGA CAGTTGCTCCATATGCCAACTTAGGAGAAGTTAAACTCAGAATCACAGCCAGAGCAAAGAATGAAGTTGAAGCAAAGAAT ATTATTAAACCAATAAAAGAAAAATTAAAACAAGAGTTTTCTAAATTTATTTTTGGAGAAGATAATGATACTCTTCCAAG TATTTTAATAAAAGAATTAACCAAGAGGAAACAAACTATTGTTTTTGCTGAATCCTGTACCGGAGGCCTGTTATCTGCAT CACTAACATCAATATCAGGCTCATCTCAAGTTTTTCAAGGTAGTATTGTTTCCTATAGTAATGAGCTAAAACATTTATTA TTAGATATTTCTGAAGAAAAGCTTGCAAAATATGGAGCTGTTTCTGAAGAAGTTTGTGAGGCTATGGCAATTAATGTCAA AAAGAAATTAAGAGCAGATTGGGCAATATCAATTAGTGGAATAGCTGGTCCTAACGGAGGCAGTCAAAATAAACCAGTTG GACTTGTCTATATCTCAATTTCAGGACCGAATAATTATATAACTACTATAAAAAAACAATTTAATTCAACCCGAAATAGA CTTGAAATTCAAACACTAAGTGTAAATGTGTGTTTAAACAGCCTCAGATTAATCCTATTATCGGATAGTAAGTAA
Upstream 100 bases:
>100_bases ACCCAGACGATTCACTGATTGAAAGTCAATGTAAAGAAAGAGTATTAACCCTATGTAATCGTTTTCCTCTTTATGAAAGC AAACTTGAAGCATCAATTAA
Downstream 100 bases:
>100_bases CTTTTTTACAAATTGAGTAAAGATACCTTATTTGATAAAGTTTGGGATTTACACAAAGTTTCCAGTCTCCCTGGTGGCTC AGATCAAATTTTTATTGGTC
Product: molybdenum cofactor biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSPNSKGVEILSIGTELLLGNIINTNAQWISEQLSQLGLNHFRQSTVGDNCDRIVRVIQEISKRSNLLITTGGLGPTPDD LTTEAIAKSFNVTLFERPHLWDEIKQKLPNSKLHEDSSSLRKQCFFPKNAQIINNPRGTAPGMIWEPIKGFTILTFPGVP SEMKTMWEETAYDFIQTKFSDTYSFFSNTLKFAGIGESSVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKNEVEAKN IIKPIKEKLKQEFSKFIFGEDNDTLPSILIKELTKRKQTIVFAESCTGGLLSASLTSISGSSQVFQGSIVSYSNELKHLL LDISEEKLAKYGAVSEEVCEAMAINVKKKLRADWAISISGIAGPNGGSQNKPVGLVYISISGPNNYITTIKKQFNSTRNR LEIQTLSVNVCLNSLRLILLSDSK
Sequences:
>Translated_424_residues MSPNSKGVEILSIGTELLLGNIINTNAQWISEQLSQLGLNHFRQSTVGDNCDRIVRVIQEISKRSNLLITTGGLGPTPDD LTTEAIAKSFNVTLFERPHLWDEIKQKLPNSKLHEDSSSLRKQCFFPKNAQIINNPRGTAPGMIWEPIKGFTILTFPGVP SEMKTMWEETAYDFIQTKFSDTYSFFSNTLKFAGIGESSVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKNEVEAKN IIKPIKEKLKQEFSKFIFGEDNDTLPSILIKELTKRKQTIVFAESCTGGLLSASLTSISGSSQVFQGSIVSYSNELKHLL LDISEEKLAKYGAVSEEVCEAMAINVKKKLRADWAISISGIAGPNGGSQNKPVGLVYISISGPNNYITTIKKQFNSTRNR LEIQTLSVNVCLNSLRLILLSDSK >Mature_423_residues SPNSKGVEILSIGTELLLGNIINTNAQWISEQLSQLGLNHFRQSTVGDNCDRIVRVIQEISKRSNLLITTGGLGPTPDDL TTEAIAKSFNVTLFERPHLWDEIKQKLPNSKLHEDSSSLRKQCFFPKNAQIINNPRGTAPGMIWEPIKGFTILTFPGVPS EMKTMWEETAYDFIQTKFSDTYSFFSNTLKFAGIGESSVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKNEVEAKNI IKPIKEKLKQEFSKFIFGEDNDTLPSILIKELTKRKQTIVFAESCTGGLLSASLTSISGSSQVFQGSIVSYSNELKHLLL DISEEKLAKYGAVSEEVCEAMAINVKKKLRADWAISISGIAGPNGGSQNKPVGLVYISISGPNNYITTIKKQFNSTRNRL EIQTLSVNVCLNSLRLILLSDSK
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family
Homologues:
Organism=Escherichia coli, GI1788583, Length=291, Percent_Identity=32.6460481099656, Blast_Score=135, Evalue=7e-33, Organism=Escherichia coli, GI1789052, Length=137, Percent_Identity=43.7956204379562, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1787818, Length=129, Percent_Identity=34.1085271317829, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71993974, Length=279, Percent_Identity=26.5232974910394, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71993966, Length=279, Percent_Identity=26.5232974910394, Blast_Score=75, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323832, Length=167, Percent_Identity=28.7425149700599, Blast_Score=76, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CINAL_PROM0 (A3PAX8)
Other databases:
- EMBL: CP000576 - RefSeq: YP_001090504.1 - ProteinModelPortal: A3PAX8 - SMR: A3PAX8 - STRING: A3PAX8 - GeneID: 4912777 - GenomeReviews: CP000576_GR - KEGG: pmg:P9301_02801 - eggNOG: COG1058 - HOGENOM: HBG449871 - OMA: NPTVAPY - ProtClustDB: CLSK921788 - BioCyc: PMAR167546:P9301ORF_0283-MONOMER - HAMAP: MF_00226_B - InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 - Gene3D: G3DSA:3.40.980.10 - PIRSF: PIRSF006728 - SMART: SM00852 - TIGRFAMs: TIGR00199 - TIGRFAMs: TIGR00200
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth; SSF53218 MoCF_biosynth
EC number: NA
Molecular weight: Translated: 46878; Mature: 46747
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPNSKGVEILSIGTELLLGNIINTNAQWISEQLSQLGLNHFRQSTVGDNCDRIVRVIQE CCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ISKRSNLLITTGGLGPTPDDLTTEAIAKSFNVTLFERPHLWDEIKQKLPNSKLHEDSSSL HHHCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCCCCCHHHH RKQCFFPKNAQIINNPRGTAPGMIWEPIKGFTILTFPGVPSEMKTMWEETAYDFIQTKFS HHHHCCCCCCEEECCCCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH DTYSFFSNTLKFAGIGESSVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKNEVEAKN HHHHHHHHCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHH IIKPIKEKLKQEFSKFIFGEDNDTLPSILIKELTKRKQTIVFAESCTGGLLSASLTSISG HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHCCC SSQVFQGSIVSYSNELKHLLLDISEEKLAKYGAVSEEVCEAMAINVKKKLRADWAISISG CCHHHHCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEC IAGPNGGSQNKPVGLVYISISGPNNYITTIKKQFNSTRNRLEIQTLSVNVCLNSLRLILL CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCHHHEEEEEEEEHHHHHCCEEEEEE SDSK ECCC >Mature Secondary Structure SPNSKGVEILSIGTELLLGNIINTNAQWISEQLSQLGLNHFRQSTVGDNCDRIVRVIQE CCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH ISKRSNLLITTGGLGPTPDDLTTEAIAKSFNVTLFERPHLWDEIKQKLPNSKLHEDSSSL HHHCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHHCCCCCCCCCHHHH RKQCFFPKNAQIINNPRGTAPGMIWEPIKGFTILTFPGVPSEMKTMWEETAYDFIQTKFS HHHHCCCCCCEEECCCCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH DTYSFFSNTLKFAGIGESSVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKNEVEAKN HHHHHHHHCCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHH IIKPIKEKLKQEFSKFIFGEDNDTLPSILIKELTKRKQTIVFAESCTGGLLSASLTSISG HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHCCC SSQVFQGSIVSYSNELKHLLLDISEEKLAKYGAVSEEVCEAMAINVKKKLRADWAISISG CCHHHHCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEC IAGPNGGSQNKPVGLVYISISGPNNYITTIKKQFNSTRNRLEIQTLSVNVCLNSLRLILL CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHCCHHHEEEEEEEEHHHHHCCEEEEEE SDSK ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA