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The map label for this gene is psbO [H]

Identifier: 126695588

GI number: 126695588

Start: 233907

End: 234746

Strand: Reverse

Name: psbO [H]

Synonym: P9301_02501

Alternate gene names: 126695588

Gene position: 234746-233907 (Counterclockwise)

Preceding gene: 126695589

Following gene: 126695587

Centisome position: 14.3

GC content: 35.95

Gene sequence:

>840_bases
ATGACCTTTAATCTATCGTCACAGAACTTTACTGCAACTTTAATTATGAGAATTCGTTCTTTCTTAGCTTTTGTTATTTC
AATTTGTATAACTTTTGCTTTCGTACCTGTTAAAACATTTGCTTTTTCTGAAAGAGGAAATGCACAATTCACAGATGTTG
TTAATACTGGAAAAGCTAATGATTGCCCTACATTAGACTCATCTCTTATCGGATCAATATCTCTAAGTAATGGAGATAGC
CTCAAAGGAATATGCATGCATCCAACAGAAGTTTATGTAAAAGTGCCAGGGACAAAACGAAAAGCTGCAGAATTTGTTTC
TACAAAAATTATTAGTCCTAGAAATAACACCACAGTGACAGAAGTTTATGGAGATATAGATTCAGGAACTTTCACCGAAA
AAGGTGGTATTGATTTTCAACTTATTACTGTATTAACCCCTGGTGGTTTAGAGGTACCATTTGCATTCTCAGCAAAAGAT
CTTACTGCTGATTTACCCTCATCAATTCAGCCAGGCACTGAGGTTAGTGGCTCAACATTTACACCTAACTACAGAACAGG
TGATTTTCTAGATCCTAAGGCAAGAGCTAAAAATACTGGTGTTGAATATGCTCAAGGTTTAGTTGCATTAGGAGGAGATG
ACGAAGAACTTGCTAAAGAAAATATCAAAGTTGATGTAAACGGCACTGGCGTTATTACTCTTTCAATTAACAATGTAGAT
TCTGACACAGACGAATTTGCTGGTACTTTTGAAGCTATCCAACCTTCAGATACAGACATGGGATCAAAAGATCCACTCGA
TGTAAAAATAATAGGAGAGCTTTACGGAAGAAAGGCATAA

Upstream 100 bases:

>100_bases
CAGTTTTTCAAAATCTAAAAAGCTACGGGTTGTTTCGAGGATTTAAAAGTCCTTTCTTTTATGGTCCTTTCCCTTGTAAT
ATCCGTACTGAACTATTTAG

Downstream 100 bases:

>100_bases
ATCCTAATTAATAAATAAAAGGGGGTTCCACCCCTCTTTTTTTTTTCAAAATTTTTATTTATCAATTCAAAAAATGGAAT
TACAACAAAAAACAAAAACT

Product: photosystem II manganese-stabilizing protein

Products: NA

Alternate protein names: MSP [H]

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTFNLSSQNFTATLIMRIRSFLAFVISICITFAFVPVKTFAFSERGNAQFTDVVNTGKANDCPTLDSSLIGSISLSNGDS
LKGICMHPTEVYVKVPGTKRKAAEFVSTKIISPRNNTTVTEVYGDIDSGTFTEKGGIDFQLITVLTPGGLEVPFAFSAKD
LTADLPSSIQPGTEVSGSTFTPNYRTGDFLDPKARAKNTGVEYAQGLVALGGDDEELAKENIKVDVNGTGVITLSINNVD
SDTDEFAGTFEAIQPSDTDMGSKDPLDVKIIGELYGRKA

Sequences:

>Translated_279_residues
MTFNLSSQNFTATLIMRIRSFLAFVISICITFAFVPVKTFAFSERGNAQFTDVVNTGKANDCPTLDSSLIGSISLSNGDS
LKGICMHPTEVYVKVPGTKRKAAEFVSTKIISPRNNTTVTEVYGDIDSGTFTEKGGIDFQLITVLTPGGLEVPFAFSAKD
LTADLPSSIQPGTEVSGSTFTPNYRTGDFLDPKARAKNTGVEYAQGLVALGGDDEELAKENIKVDVNGTGVITLSINNVD
SDTDEFAGTFEAIQPSDTDMGSKDPLDVKIIGELYGRKA
>Mature_278_residues
TFNLSSQNFTATLIMRIRSFLAFVISICITFAFVPVKTFAFSERGNAQFTDVVNTGKANDCPTLDSSLIGSISLSNGDSL
KGICMHPTEVYVKVPGTKRKAAEFVSTKIISPRNNTTVTEVYGDIDSGTFTEKGGIDFQLITVLTPGGLEVPFAFSAKDL
TADLPSSIQPGTEVSGSTFTPNYRTGDFLDPKARAKNTGVEYAQGLVALGGDDEELAKENIKVDVNGTGVITLSINNVDS
DTDEFAGTFEAIQPSDTDMGSKDPLDVKIIGELYGRKA

Specific function: MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Lumenal side. Note=Lumenal surface of thylakoid membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002628 [H]

Pfam domain/function: PF01716 MSP [H]

EC number: NA

Molecular weight: Translated: 29815; Mature: 29684

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFNLSSQNFTATLIMRIRSFLAFVISICITFAFVPVKTFAFSERGNAQFTDVVNTGKAN
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEHCCCCCCC
DCPTLDSSLIGSISLSNGDSLKGICMHPTEVYVKVPGTKRKAAEFVSTKIISPRNNTTVT
CCCCCCHHHEEEEEECCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHEEECCCCCCEEE
EVYGDIDSGTFTEKGGIDFQLITVLTPGGLEVPFAFSAKDLTADLPSSIQPGTEVSGSTF
EEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCHHCCCCCCCCCCCCCCCCCEE
TPNYRTGDFLDPKARAKNTGVEYAQGLVALGGDDEELAKENIKVDVNGTGVITLSINNVD
CCCCCCCCCCCCHHHCCCCCHHHHCCEEEECCCHHHHHHCCCEEEECCCEEEEEEECCCC
SDTDEFAGTFEAIQPSDTDMGSKDPLDVKIIGELYGRKA
CCHHHHCCHHHCCCCCCCCCCCCCCCCEEEEEHHCCCCC
>Mature Secondary Structure 
TFNLSSQNFTATLIMRIRSFLAFVISICITFAFVPVKTFAFSERGNAQFTDVVNTGKAN
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEHCCCCCCC
DCPTLDSSLIGSISLSNGDSLKGICMHPTEVYVKVPGTKRKAAEFVSTKIISPRNNTTVT
CCCCCCHHHEEEEEECCCCCCCEEEECCCEEEEECCCCHHHHHHHHHHEEECCCCCCEEE
EVYGDIDSGTFTEKGGIDFQLITVLTPGGLEVPFAFSAKDLTADLPSSIQPGTEVSGSTF
EEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCHHCCCCCCCCCCCCCCCCCEE
TPNYRTGDFLDPKARAKNTGVEYAQGLVALGGDDEELAKENIKVDVNGTGVITLSINNVD
CCCCCCCCCCCCHHHCCCCCHHHHCCEEEECCCHHHHHHCCCEEEECCCEEEEEEECCCC
SDTDEFAGTFEAIQPSDTDMGSKDPLDVKIIGELYGRKA
CCHHHHCCHHHCCCCCCCCCCCCCCCCEEEEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3120187; 2689172 [H]