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The map label for this gene is sufC [C]

Identifier: 126695421

GI number: 126695421

Start: 86889

End: 87674

Strand: Reverse

Name: sufC [C]

Synonym: P9301_00831

Alternate gene names: 126695421

Gene position: 87674-86889 (Counterclockwise)

Preceding gene: 126695422

Following gene: 126695420

Centisome position: 5.34

GC content: 33.97

Gene sequence:

>786_bases
ATGCAAAGTAAAATGAATGAATCAGATCCAATTTTAGAAGTTAAAAATCTCTCTGCATCTACTGATAATCTTCCAATTTT
AAAAGGGGTTTCACTTACTGTCTATCCTGGAGAAATCCATGCCATTATGGGGAGAAATGGATGTGGTAAAAGTACTCTTT
CAAAAATCATTGCAGGACACCCCTCATATAATATTACGAATGGCGACATAAAATTTTTAGGCGAAAACATCAACTCTCTA
GAACCTGAAGCGAGATCTCAATCAGGAATTTTTCTTGGTTTTCAATATCCAATTGAGATTCCAGGTGTTAGTAATCTTGA
ATTTCTTAGAGTTTCAACTAATGCTAGAAGGAAATTCCTCAACAAAGAAGAATTGGATACTTTTGATTTTGAAGAATTAG
TTAAAGAAAAGTTAGAAATTGTGAAAATGGATCAGGCATTCCTTTCAAGGAGTGTAAATCAAGGCTTTTCCGGAGGTGAA
AAAAAAAGAAATGAGATTCTACAAATGGCTTTACTTGAGCCCAAGATAGCAATATTAGATGAGACCGATTCTGGTCTAGA
TATCGATGCTCTAAGAATAGTGGCATCAGGAATTAAAAAAATATCTAATGCACAAACTGGAATTATACTCATTACCCACT
ATCAAAGATTATTAGATGAGATTAAACCAAATTATGTCCATGTTATGTCAGACGGACAAATCATAAAAACTGGTGAGAGC
GATCTTGCTCTAGAGCTTGAGAAGAAAGGGTATGAATGGACTGATAACTTTATAAAAGAGACCTAA

Upstream 100 bases:

>100_bases
ATGTATTTAATCAATTACCTATGGAATTTGCTGCTGAAGCAGATAAGTTACTGGCACTTAAACTTGAGGGATCAGTAGGT
TAATTAATTTCTAAACTGAA

Downstream 100 bases:

>100_bases
ATAAATGGAAATTATTGAAAAAATAAAAACCAAAAAATCGATTGATAATCAAACAGAAATACAAAAAATCTGTCTAGATA
AATTACAATCGAGTCCCCTC

Product: ABC transporter, ATP binding component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MQSKMNESDPILEVKNLSASTDNLPILKGVSLTVYPGEIHAIMGRNGCGKSTLSKIIAGHPSYNITNGDIKFLGENINSL
EPEARSQSGIFLGFQYPIEIPGVSNLEFLRVSTNARRKFLNKEELDTFDFEELVKEKLEIVKMDQAFLSRSVNQGFSGGE
KKRNEILQMALLEPKIAILDETDSGLDIDALRIVASGIKKISNAQTGIILITHYQRLLDEIKPNYVHVMSDGQIIKTGES
DLALELEKKGYEWTDNFIKET

Sequences:

>Translated_261_residues
MQSKMNESDPILEVKNLSASTDNLPILKGVSLTVYPGEIHAIMGRNGCGKSTLSKIIAGHPSYNITNGDIKFLGENINSL
EPEARSQSGIFLGFQYPIEIPGVSNLEFLRVSTNARRKFLNKEELDTFDFEELVKEKLEIVKMDQAFLSRSVNQGFSGGE
KKRNEILQMALLEPKIAILDETDSGLDIDALRIVASGIKKISNAQTGIILITHYQRLLDEIKPNYVHVMSDGQIIKTGES
DLALELEKKGYEWTDNFIKET
>Mature_261_residues
MQSKMNESDPILEVKNLSASTDNLPILKGVSLTVYPGEIHAIMGRNGCGKSTLSKIIAGHPSYNITNGDIKFLGENINSL
EPEARSQSGIFLGFQYPIEIPGVSNLEFLRVSTNARRKFLNKEELDTFDFEELVKEKLEIVKMDQAFLSRSVNQGFSGGE
KKRNEILQMALLEPKIAILDETDSGLDIDALRIVASGIKKISNAQTGIILITHYQRLLDEIKPNYVHVMSDGQIIKTGES
DLALELEKKGYEWTDNFIKET

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI156105685, Length=229, Percent_Identity=27.0742358078603, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI42741659, Length=239, Percent_Identity=28.8702928870293, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI9961252, Length=236, Percent_Identity=30.5084745762712, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI9961250, Length=236, Percent_Identity=30.5084745762712, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI4505771, Length=236, Percent_Identity=30.5084745762712, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1787972, Length=243, Percent_Identity=53.9094650205761, Blast_Score=290, Evalue=8e-80,
Organism=Escherichia coli, GI87081791, Length=235, Percent_Identity=28.0851063829787, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787792, Length=242, Percent_Identity=28.099173553719, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789891, Length=217, Percent_Identity=32.7188940092166, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790525, Length=235, Percent_Identity=28.5106382978723, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790190, Length=231, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787500, Length=224, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788761, Length=231, Percent_Identity=26.4069264069264, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1790467, Length=183, Percent_Identity=27.8688524590164, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787370, Length=232, Percent_Identity=25, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1786654, Length=267, Percent_Identity=25.4681647940075, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786345, Length=240, Percent_Identity=25, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789864, Length=241, Percent_Identity=26.1410788381743, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786319, Length=188, Percent_Identity=27.6595744680851, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789593, Length=231, Percent_Identity=27.7056277056277, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI87081709, Length=232, Percent_Identity=27.1551724137931, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1787759, Length=261, Percent_Identity=24.904214559387, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787712, Length=206, Percent_Identity=26.6990291262136, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1789672, Length=243, Percent_Identity=24.2798353909465, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI87082267, Length=177, Percent_Identity=28.8135593220339, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI25146777, Length=241, Percent_Identity=27.3858921161826, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=237, Percent_Identity=29.535864978903, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=220, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=237, Percent_Identity=27.4261603375527, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=245, Percent_Identity=28.1632653061224, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=245, Percent_Identity=28.1632653061224, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=245, Percent_Identity=28.1632653061224, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=235, Percent_Identity=25.9574468085106, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=235, Percent_Identity=25.9574468085106, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=235, Percent_Identity=25.9574468085106, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=266, Percent_Identity=27.0676691729323, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24641565, Length=221, Percent_Identity=28.5067873303167, Blast_Score=67, Evalue=9e-12,
Organism=Drosophila melanogaster, GI85726357, Length=250, Percent_Identity=27.2, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 29105; Mature: 29105

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKMNESDPILEVKNLSASTDNLPILKGVSLTVYPGEIHAIMGRNGCGKSTLSKIIAGH
CCCCCCCCCCEEEEECCCCCCCCCCEEECCEEEEECCEEEEEECCCCCCHHHHHHHHHCC
PSYNITNGDIKFLGENINSLEPEARSQSGIFLGFQYPIEIPGVSNLEFLRVSTNARRKFL
CCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCEEEEECCHHHHHHC
NKEELDTFDFEELVKEKLEIVKMDQAFLSRSVNQGFSGGEKKRNEILQMALLEPKIAILD
CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEE
ETDSGLDIDALRIVASGIKKISNAQTGIILITHYQRLLDEIKPNYVHVMSDGQIIKTGES
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCEEEEECCCEEEEECCC
DLALELEKKGYEWTDNFIKET
CEEEEEECCCCCHHHHHHCCC
>Mature Secondary Structure
MQSKMNESDPILEVKNLSASTDNLPILKGVSLTVYPGEIHAIMGRNGCGKSTLSKIIAGH
CCCCCCCCCCEEEEECCCCCCCCCCEEECCEEEEECCEEEEEECCCCCCHHHHHHHHHCC
PSYNITNGDIKFLGENINSLEPEARSQSGIFLGFQYPIEIPGVSNLEFLRVSTNARRKFL
CCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCEECCCCCCCEEEEECCHHHHHHC
NKEELDTFDFEELVKEKLEIVKMDQAFLSRSVNQGFSGGEKKRNEILQMALLEPKIAILD
CHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEE
ETDSGLDIDALRIVASGIKKISNAQTGIILITHYQRLLDEIKPNYVHVMSDGQIIKTGES
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCEEEEECCCEEEEECCC
DLALELEKKGYEWTDNFIKET
CEEEEEECCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]