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The map label for this gene is sufD [C]

Identifier: 126695420

GI number: 126695420

Start: 85667

End: 86884

Strand: Reverse

Name: sufD [C]

Synonym: P9301_00821

Alternate gene names: 126695420

Gene position: 86884-85667 (Counterclockwise)

Preceding gene: 126695421

Following gene: 126695419

Centisome position: 5.29

GC content: 27.59

Gene sequence:

>1218_bases
ATGGAAATTATTGAAAAAATAAAAACCAAAAAATCGATTGATAATCAAACAGAAATACAAAAAATCTGTCTAGATAAATT
ACAATCGAGTCCCCTCCCCAATCCTAGAAGTGAACAATGGAGACTTTCAAATAAATCAAAATTATCAAACTTTTTACATT
ACTCAGTTAATGAAAACAATTCAAAATTTGATATACCATATCCGAAAAATTCTCAAAGTACTATTAGGTTAATAATTGGT
GAGAATTACCAAATTAAACTAATAGAGAAAAATTATTCAATACAACAATTAAGTGAGGATGAATTACAAAAATATATCAA
GGAACAGATATCTTTTTTTAATCAAAACGAAAATTGGAGTGACCTACTAAATCTATCTTTAAGTTGTAAAAATAATATTT
TGGGATTAAAAATAAATGGATCAAAAATTCCTCCTATTGAAGTCTTTAGTCATGCATCAAGTAATTCTTTAAACGCAAAA
ACCCTAATAATATTTTTAGAAAAGAATTGTAATGTTGAATTATTACAAGTAAATCTTGGTGAAGACAACTCTTCATTATC
TCAATCGACTTTCTTTTCTTTAGAAGAAAATAGTTCCCTAAACCATGGTGTTGTTTCTTACGGTGTAAACGAATCAAATC
TATTAAATTCTCTCAATGTAATTCAACAAAAAAATAGCGAATACAATTTAGGATCTCTACATTCTAAATTTAATTATGCA
AGATTTGAAATTCGTATTAAACAATCTGAAGGAAACGCTAAAACCAATATCAAAGGTATGCAAATAACAAAGAAAGATGA
GCAAATTTCTACTTATACAAAAATAGACTTTGATGGGCCAAATGGATTTCTGGATCAAATAAATAAATCACTCGCTGACG
ATAAATCACATGCAATATTTGAAGGTTCAATAATAGTTCCGAAAATTGCCCAGAAAACTGATGCTTCTCAATTAAGCAGA
AATTTACTTTTATCAAATCTCGCACAAATAGATACCAAACCTCAATTAGAAATAATTGCTGATGATGTCAAATGCAAACA
TGGGGCTACAATTTCACAACTAAATGAAGAAGAACTTTTTTATATGCGAACAAGAGGAATCACATTAACAGAAGCAAGTA
AACTACAATTAACTTCTTACTTTCAAGAAATAATTTCATTTATTCCCGTTTCAAAAGATAGATGGGATTTGCTTGATAAA
CTTTTAAATGAAAATTAA

Upstream 100 bases:

>100_bases
GACGGACAAATCATAAAAACTGGTGAGAGCGATCTTGCTCTAGAGCTTGAGAAGAAAGGGTATGAATGGACTGATAACTT
TATAAAAGAGACCTAAATAA

Downstream 100 bases:

>100_bases
TGGATACAATTCAAAATTTTCCTGAAATAACAAAGAAGGACTTTCCCCTTTTAAATAAGAACTTAAAAAGTAGTGAGCAA
ATTATTTATTTAGACCATGC

Product: ABC transporter, membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MEIIEKIKTKKSIDNQTEIQKICLDKLQSSPLPNPRSEQWRLSNKSKLSNFLHYSVNENNSKFDIPYPKNSQSTIRLIIG
ENYQIKLIEKNYSIQQLSEDELQKYIKEQISFFNQNENWSDLLNLSLSCKNNILGLKINGSKIPPIEVFSHASSNSLNAK
TLIIFLEKNCNVELLQVNLGEDNSSLSQSTFFSLEENSSLNHGVVSYGVNESNLLNSLNVIQQKNSEYNLGSLHSKFNYA
RFEIRIKQSEGNAKTNIKGMQITKKDEQISTYTKIDFDGPNGFLDQINKSLADDKSHAIFEGSIIVPKIAQKTDASQLSR
NLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEEELFYMRTRGITLTEASKLQLTSYFQEIISFIPVSKDRWDLLDK
LLNEN

Sequences:

>Translated_405_residues
MEIIEKIKTKKSIDNQTEIQKICLDKLQSSPLPNPRSEQWRLSNKSKLSNFLHYSVNENNSKFDIPYPKNSQSTIRLIIG
ENYQIKLIEKNYSIQQLSEDELQKYIKEQISFFNQNENWSDLLNLSLSCKNNILGLKINGSKIPPIEVFSHASSNSLNAK
TLIIFLEKNCNVELLQVNLGEDNSSLSQSTFFSLEENSSLNHGVVSYGVNESNLLNSLNVIQQKNSEYNLGSLHSKFNYA
RFEIRIKQSEGNAKTNIKGMQITKKDEQISTYTKIDFDGPNGFLDQINKSLADDKSHAIFEGSIIVPKIAQKTDASQLSR
NLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEEELFYMRTRGITLTEASKLQLTSYFQEIISFIPVSKDRWDLLDK
LLNEN
>Mature_405_residues
MEIIEKIKTKKSIDNQTEIQKICLDKLQSSPLPNPRSEQWRLSNKSKLSNFLHYSVNENNSKFDIPYPKNSQSTIRLIIG
ENYQIKLIEKNYSIQQLSEDELQKYIKEQISFFNQNENWSDLLNLSLSCKNNILGLKINGSKIPPIEVFSHASSNSLNAK
TLIIFLEKNCNVELLQVNLGEDNSSLSQSTFFSLEENSSLNHGVVSYGVNESNLLNSLNVIQQKNSEYNLGSLHSKFNYA
RFEIRIKQSEGNAKTNIKGMQITKKDEQISTYTKIDFDGPNGFLDQINKSLADDKSHAIFEGSIIVPKIAQKTDASQLSR
NLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEEELFYMRTRGITLTEASKLQLTSYFQEIISFIPVSKDRWDLLDK
LLNEN

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=135, Percent_Identity=39.2592592592593, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 46140; Mature: 46140

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIEKIKTKKSIDNQTEIQKICLDKLQSSPLPNPRSEQWRLSNKSKLSNFLHYSVNENN
CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHEEEEECCCC
SKFDIPYPKNSQSTIRLIIGENYQIKLIEKNYSIQQLSEDELQKYIKEQISFFNQNENWS
CEEECCCCCCCCCEEEEEECCCEEEEEEECCCCHHHCCHHHHHHHHHHHHHHCCCCCCHH
DLLNLSLSCKNNILGLKINGSKIPPIEVFSHASSNSLNAKTLIIFLEKNCNVELLQVNLG
HHHEEEEECCCCEEEEEECCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEEEC
EDNSSLSQSTFFSLEENSSLNHGVVSYGVNESNLLNSLNVIQQKNSEYNLGSLHSKFNYA
CCCCCCCHHHEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCEE
RFEIRIKQSEGNAKTNIKGMQITKKDEQISTYTKIDFDGPNGFLDQINKSLADDKSHAIF
EEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEE
EGSIIVPKIAQKTDASQLSRNLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEEELF
ECCEEECCHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCCEE
YMRTRGITLTEASKLQLTSYFQEIISFIPVSKDRWDLLDKLLNEN
EEEECCEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MEIIEKIKTKKSIDNQTEIQKICLDKLQSSPLPNPRSEQWRLSNKSKLSNFLHYSVNENN
CCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECCCHHHHHHHEEEEECCCC
SKFDIPYPKNSQSTIRLIIGENYQIKLIEKNYSIQQLSEDELQKYIKEQISFFNQNENWS
CEEECCCCCCCCCEEEEEECCCEEEEEEECCCCHHHCCHHHHHHHHHHHHHHCCCCCCHH
DLLNLSLSCKNNILGLKINGSKIPPIEVFSHASSNSLNAKTLIIFLEKNCNVELLQVNLG
HHHEEEEECCCCEEEEEECCCCCCHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEEEC
EDNSSLSQSTFFSLEENSSLNHGVVSYGVNESNLLNSLNVIQQKNSEYNLGSLHSKFNYA
CCCCCCCHHHEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCEE
RFEIRIKQSEGNAKTNIKGMQITKKDEQISTYTKIDFDGPNGFLDQINKSLADDKSHAIF
EEEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEE
EGSIIVPKIAQKTDASQLSRNLLLSNLAQIDTKPQLEIIADDVKCKHGATISQLNEEELF
ECCEEECCHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCCCEE
YMRTRGITLTEASKLQLTSYFQEIISFIPVSKDRWDLLDKLLNEN
EEEECCEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]