Click here to switch to the map view.

The map label for this gene is sufB [C]

Identifier: 126695422

GI number: 126695422

Start: 87692

End: 89194

Strand: Reverse

Name: sufB [C]

Synonym: P9301_00841

Alternate gene names: 126695422

Gene position: 89194-87692 (Counterclockwise)

Preceding gene: 126695428

Following gene: 126695421

Centisome position: 5.43

GC content: 34.4

Gene sequence:

>1503_bases
TTGGGGATATCTTTCGTTAAAGTATATAAAGCTAATTGTAATAAGTTATTTTTGGATAACATGGTCAACGAAAATTTAGT
TAAAGATGTAGTAAACGAAACTTACAAATATGGGTTCGTTACTGATATTGAAACTGAAAAAATAGAAAAAGGTTTAAATG
AAGATATTATAAAATTAATTTCACAGAAAAAAGAAGAGCCAAGATTTCTTCTCGATTTTAGATTAAAAGCCTTTAAAAAA
TGGCAAAAAATGAAAGAGCCTGATTGGGCAGCATTAGGATATGAAAAAATTGATTATCAAGATATTATTTATTACTCTGC
TCCTAAGCAAAAAGAAAAAATTTCTAGCTTAGATGAAGTTGATCCCAAACTTCTTGAGACTTTTGACAAATTAGGAATAC
CCCTCACGGAGCAAAAAAAACTCACAAATGTAGCAGTAGATGCTGTCTTTGATAGTGTTTCCATAGCAACAACTTTTAGA
GAAGAACTTGCTGAGCATGGAGTTATATTTTGCTCAATTAGTGAAGCAGTAAAAAATCACGCGGATTTGATTGAAAAATA
TTTAGGTACAGTTGTTCCAGCTAGTGATAATTATTTTGCAGCACTAAATTCTGCAGTTTTTAGTGATGGTTCTTTTGTTT
ATATCCCAAAAGGTGTTACCTGCCCTATGGATCTATCTTCCTACTTCAGAATTAATAGTGGAGATTCGGGACAATTCGAA
AGAACACTAATCATTGCTGAAGAATCAAGTTCTGTAAGTTATCTAGAAGGTTGTACGGCTCCGATGTTTGATACAAATAC
CCTGCATGCAGCAGTTGTAGAGCTTATAGCATTAGACGATGCCTCAATAAAATATTCAACAGTGCAAAATTGGTATGCTG
GTGATGAAGAAGGTATTGGCGGAATTTTTAACTTTGTCACCAAGAGAGGAAAATGTTTAGGTAAGAGAAGTAAAATTAGC
TGGTCTCAAGTTGAAACAGGGTCTGCAATTACATGGAAATATCCTAGCTGTCTTCTTTTAGGAGAAGAATCTGTAGGGGA
ATTTTATTCAGTTGCTCTCACCAATAATCTTCAGCAAGCAGATACCGGTACAAAAATGATCCATATTGGTCCTAAGACCA
AATCAACTATTGTTAGCAAAGGTATTAGTGCAGGTAACTCAAAAAATAGCTATAGAGGTCTTGTCAAAATGGGAACAAAA
GCTACAGGATCAAGAAATTACAGTCAATGTGATTCAATGTTAATAGGGGATCAAGCTTCTGCAAATACATTCCCTTACAT
CAAATCTCAACAACCCAATTCTGAAATTGAGCATGAAGCAAGTACATGCAGAATTTCAGAAGAGCAACTTTTTTATCTCC
AAAGCAGAGGTATAGAATTTGAGGAGGCAGTATCTATGATGGTCAGCGGTTTTTGCAGAGATGTATTTAATCAATTACCT
ATGGAATTTGCTGCTGAAGCAGATAAGTTACTGGCACTTAAACTTGAGGGATCAGTAGGTTAA

Upstream 100 bases:

>100_bases
TATCAATTTCTTGAATAGTTTCTATGTTTAATGGGTTAGACAAGGGATCAAGATGATTAGACATTAATTTTTAGTTTTAA
TAAAGGGAAAAAACTCAATA

Downstream 100 bases:

>100_bases
TTAATTTCTAAACTGAAATGCAAAGTAAAATGAATGAATCAGATCCAATTTTAGAAGTTAAAAATCTCTCTGCATCTACT
GATAATCTTCCAATTTTAAA

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MGISFVKVYKANCNKLFLDNMVNENLVKDVVNETYKYGFVTDIETEKIEKGLNEDIIKLISQKKEEPRFLLDFRLKAFKK
WQKMKEPDWAALGYEKIDYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFR
EELAEHGVIFCSISEAVKNHADLIEKYLGTVVPASDNYFAALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFE
RTLIIAEESSSVSYLEGCTAPMFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKIS
WSQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSKNSYRGLVKMGTK
ATGSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEASTCRISEEQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLP
MEFAAEADKLLALKLEGSVG

Sequences:

>Translated_500_residues
MGISFVKVYKANCNKLFLDNMVNENLVKDVVNETYKYGFVTDIETEKIEKGLNEDIIKLISQKKEEPRFLLDFRLKAFKK
WQKMKEPDWAALGYEKIDYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFR
EELAEHGVIFCSISEAVKNHADLIEKYLGTVVPASDNYFAALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFE
RTLIIAEESSSVSYLEGCTAPMFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKIS
WSQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSKNSYRGLVKMGTK
ATGSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEASTCRISEEQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLP
MEFAAEADKLLALKLEGSVG
>Mature_499_residues
GISFVKVYKANCNKLFLDNMVNENLVKDVVNETYKYGFVTDIETEKIEKGLNEDIIKLISQKKEEPRFLLDFRLKAFKKW
QKMKEPDWAALGYEKIDYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFRE
ELAEHGVIFCSISEAVKNHADLIEKYLGTVVPASDNYFAALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFER
TLIIAEESSSVSYLEGCTAPMFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKISW
SQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSKNSYRGLVKMGTKA
TGSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEASTCRISEEQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPM
EFAAEADKLLALKLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=57.4112734864301, Blast_Score=592, Evalue=1e-170,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 55609; Mature: 55477

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGISFVKVYKANCNKLFLDNMVNENLVKDVVNETYKYGFVTDIETEKIEKGLNEDIIKLI
CCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHCCCCHHHHHHH
SQKKEEPRFLLDFRLKAFKKWQKMKEPDWAALGYEKIDYQDIIYYSAPKQKEKISSLDEV
HCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEEEEECCCCHHHHHHHHHHC
DPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNH
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHH
ADLIEKYLGTVVPASDNYFAALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFE
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHEEECCCCCCCEE
RTLIIAEESSSVSYLEGCTAPMFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIG
EEEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCC
GIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQA
HHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEECCCEEEECCCCCCHHEEEHHHCCCHHC
DTGTKMIHIGPKTKSTIVSKGISAGNSKNSYRGLVKMGTKATGSRNYSQCDSMLIGDQAS
CCCCEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHEEECCCCC
ANTFPYIKSQQPNSEIEHEASTCRISEEQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLP
CCCCCCCCCCCCCCHHHHCHHHEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
MEFAAEADKLLALKLEGSVG
HHHHCCCCEEEEEEECCCCC
>Mature Secondary Structure 
GISFVKVYKANCNKLFLDNMVNENLVKDVVNETYKYGFVTDIETEKIEKGLNEDIIKLI
CCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHCCCCHHHHHHH
SQKKEEPRFLLDFRLKAFKKWQKMKEPDWAALGYEKIDYQDIIYYSAPKQKEKISSLDEV
HCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEEEEECCCCHHHHHHHHHHC
DPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNH
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHH
ADLIEKYLGTVVPASDNYFAALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFE
HHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHEEECCCCCCCEE
RTLIIAEESSSVSYLEGCTAPMFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIG
EEEEEEECCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHCCCCCCCCCC
GIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQA
HHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEECCCEEEECCCCCCHHEEEHHHCCCHHC
DTGTKMIHIGPKTKSTIVSKGISAGNSKNSYRGLVKMGTKATGSRNYSQCDSMLIGDQAS
CCCCEEEEECCCCHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHEEECCCCC
ANTFPYIKSQQPNSEIEHEASTCRISEEQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLP
CCCCCCCCCCCCCCHHHHCHHHEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
MEFAAEADKLLALKLEGSVG
HHHHCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]