| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695393
Identifier: 126695393
GI number: 126695393
Start: 62086
End: 62832
Strand: Reverse
Name: 126695393
Synonym: P9301_00551
Alternate gene names: NA
Gene position: 62832-62086 (Counterclockwise)
Preceding gene: 126695394
Following gene: 126695392
Centisome position: 3.83
GC content: 29.99
Gene sequence:
>747_bases ATGAAAAAAATTAGACCAATTTTTCTTCTATCTTCCTTAATATTTTTACTTTCGGTACCTTATGAAATATTTGCATTAAA TGGTAAGAATGTCCTGGATTTAGAAAGATCAAGAGAACTCCTATTAGATGGTTATATACAAAGTGACTTTGATAATCATC AATTAGCAATTGAATACTTTACTGAAGCAATCAGACTAAATCCAAATAATTTTTACGCTTTTTTTAGCAGAGCATATTCA AGAAACAAGATTCAAGATATTGCAGGCGCTTGGGATGACCTCAACAGAGTATTAGAAATTGATCCTAATATTGGCGTTGC TTTATATAATCGTGCAATTGTGAATGCCAAACTTGGGCACAAATTTAGTTCAATAAGAGATTATTCAAAAGCAATTAATA AGAATATTGAGTTGAAAAATGCATATGCTTCAAGAGGGATCCTTAAATCAAATATTGGAGATATTCAAGGAGCATGCTTT GATTGGCAAAAAGCAAGCGAAAATAATAATGAAAAAGCAACTTCATGGGTGCAAAAGTACTGTTTACCAAATATTTCTGA AGAATTTCAAAAGAAAGTAAATACAAAAGTTTTTATGGCCAATGCAAGAAGAAAATACTTTGATGGTGAAATCAAAGAAG CATGTAATTATTACGAACAAGCAAAAATAAACGGTTATAAAGCAAATAACTTTAGGGACAAATTAACTCTTATGATTATT ACTAATCCGATGTGCTTTGTCTTTTGA
Upstream 100 bases:
>100_bases AAATTATTTAAAAAGACTATTTTCCCTGAGGTTAAACTTGAATCCCAAAGATTAATCGATCTAATAATAAATAATCGATC TACTAAAAAAATAAGAATTC
Downstream 100 bases:
>100_bases TCCCGCAAGATGGCAACCTTTGATGAATTCTTTTCATCTTTAGATTTAGATGAAGAAGGCAATATAAAACACAATAAAAC AGAGAAAGGTCGCCCTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Tetratricopeptide Tpr_1 Repeat-Containing Protein; TPR Repeat- And Protein Kinase Domain-Containing Protein; Pentapeptide Repeat-Containing Serine/Threonine Kinase; Tfp Pilus Assembly Protein PilF; TPR Repeat-Containing Protein Kinase
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKKIRPIFLLSSLIFLLSVPYEIFALNGKNVLDLERSRELLLDGYIQSDFDNHQLAIEYFTEAIRLNPNNFYAFFSRAYS RNKIQDIAGAWDDLNRVLEIDPNIGVALYNRAIVNAKLGHKFSSIRDYSKAINKNIELKNAYASRGILKSNIGDIQGACF DWQKASENNNEKATSWVQKYCLPNISEEFQKKVNTKVFMANARRKYFDGEIKEACNYYEQAKINGYKANNFRDKLTLMII TNPMCFVF
Sequences:
>Translated_248_residues MKKIRPIFLLSSLIFLLSVPYEIFALNGKNVLDLERSRELLLDGYIQSDFDNHQLAIEYFTEAIRLNPNNFYAFFSRAYS RNKIQDIAGAWDDLNRVLEIDPNIGVALYNRAIVNAKLGHKFSSIRDYSKAINKNIELKNAYASRGILKSNIGDIQGACF DWQKASENNNEKATSWVQKYCLPNISEEFQKKVNTKVFMANARRKYFDGEIKEACNYYEQAKINGYKANNFRDKLTLMII TNPMCFVF >Mature_248_residues MKKIRPIFLLSSLIFLLSVPYEIFALNGKNVLDLERSRELLLDGYIQSDFDNHQLAIEYFTEAIRLNPNNFYAFFSRAYS RNKIQDIAGAWDDLNRVLEIDPNIGVALYNRAIVNAKLGHKFSSIRDYSKAINKNIELKNAYASRGILKSNIGDIQGACF DWQKASENNNEKATSWVQKYCLPNISEEFQKKVNTKVFMANARRKYFDGEIKEACNYYEQAKINGYKANNFRDKLTLMII TNPMCFVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28724; Mature: 28724
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIRPIFLLSSLIFLLSVPYEIFALNGKNVLDLERSRELLLDGYIQSDFDNHQLAIEYF CCCCHHHHHHHHHHHHHHCCHHEEEECCCCEECHHHHHHHHHHHHHHCCCCCCHHHHHHH TEAIRLNPNNFYAFFSRAYSRNKIQDIAGAWDDLNRVLEIDPNIGVALYNRAIVNAKLGH HHHHEECCCHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCEEEHHHHHHHHHHCC KFSSIRDYSKAINKNIELKNAYASRGILKSNIGDIQGACFDWQKASENNNEKATSWVQKY HHHHHHHHHHHHCCCCEEEHHHHHCCCHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHHH CLPNISEEFQKKVNTKVFMANARRKYFDGEIKEACNYYEQAKINGYKANNFRDKLTLMII HCCCHHHHHHHHHCCEEEEECCCHHHCCCHHHHHHHHHHHHCCCCEECCCCCCEEEEEEE TNPMCFVF ECCEEEEC >Mature Secondary Structure MKKIRPIFLLSSLIFLLSVPYEIFALNGKNVLDLERSRELLLDGYIQSDFDNHQLAIEYF CCCCHHHHHHHHHHHHHHCCHHEEEECCCCEECHHHHHHHHHHHHHHCCCCCCHHHHHHH TEAIRLNPNNFYAFFSRAYSRNKIQDIAGAWDDLNRVLEIDPNIGVALYNRAIVNAKLGH HHHHEECCCHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCEEEHHHHHHHHHHCC KFSSIRDYSKAINKNIELKNAYASRGILKSNIGDIQGACFDWQKASENNNEKATSWVQKY HHHHHHHHHHHHCCCCEEEHHHHHCCCHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHHH CLPNISEEFQKKVNTKVFMANARRKYFDGEIKEACNYYEQAKINGYKANNFRDKLTLMII HCCCHHHHHHHHHCCEEEEECCCHHHCCCHHHHHHHHHHHHCCCCEECCCCCCEEEEEEE TNPMCFVF ECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA