Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is 126695394

Identifier: 126695394

GI number: 126695394

Start: 62819

End: 63253

Strand: Reverse

Name: 126695394

Synonym: P9301_00561

Alternate gene names: NA

Gene position: 63253-62819 (Counterclockwise)

Preceding gene: 126695397

Following gene: 126695393

Centisome position: 3.85

GC content: 25.29

Gene sequence:

>435_bases
TTGATATGCCTGGATACGAAGAAAAAAGTTGTTAAATCGGTTAAATCTAAACAAGTCAATTTTTATATTATGGATCGAAA
AACTGCAATGCCAACTGAAATAGAACTTGAATTAAAAAAATTCGAACTTAAAATTTCCAAACTAAACAAAGAAGAAATGT
TTAAGGAACTAATGCTTCTTAAATTTGATTCTGAAAATAATTTTTATTTTATAAAGAAGTATTTAAGCAAACATGGTATG
AAAATATCCAGACAAATCATTCAAAAGCACAATACAGATCATGTAGTGATCGCTTTTGGATATTTATCCGAAAAAATGCA
TAAATTATTTAAAAAGACTATTTTCCCTGAGGTTAAACTTGAATCCCAAAGATTAATCGATCTAATAATAAATAATCGAT
CTACTAAAAAAATAAGAATTCATGAAAAAAATTAG

Upstream 100 bases:

>100_bases
CTCAAATTCTTTTCTTTGTAAAGGATGAACCAACATTAAAAAATATTCAATATTTATTTTTTAAAAGTAATAAAATTAAT
TTTTTAGAACAGTAAATATT

Downstream 100 bases:

>100_bases
ACCAATTTTTCTTCTATCTTCCTTAATATTTTTACTTTCGGTACCTTATGAAATATTTGCATTAAATGGTAAGAATGTCC
TGGATTTAGAAAGATCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MICLDTKKKVVKSVKSKQVNFYIMDRKTAMPTEIELELKKFELKISKLNKEEMFKELMLLKFDSENNFYFIKKYLSKHGM
KISRQIIQKHNTDHVVIAFGYLSEKMHKLFKKTIFPEVKLESQRLIDLIINNRSTKKIRIHEKN

Sequences:

>Translated_144_residues
MICLDTKKKVVKSVKSKQVNFYIMDRKTAMPTEIELELKKFELKISKLNKEEMFKELMLLKFDSENNFYFIKKYLSKHGM
KISRQIIQKHNTDHVVIAFGYLSEKMHKLFKKTIFPEVKLESQRLIDLIINNRSTKKIRIHEKN
>Mature_144_residues
MICLDTKKKVVKSVKSKQVNFYIMDRKTAMPTEIELELKKFELKISKLNKEEMFKELMLLKFDSENNFYFIKKYLSKHGM
KISRQIIQKHNTDHVVIAFGYLSEKMHKLFKKTIFPEVKLESQRLIDLIINNRSTKKIRIHEKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17311; Mature: 17311

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICLDTKKKVVKSVKSKQVNFYIMDRKTAMPTEIELELKKFELKISKLNKEEMFKELMLL
CEEECCHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHHHHE
KFDSENNFYFIKKYLSKHGMKISRQIIQKHNTDHVVIAFGYLSEKMHKLFKKTIFPEVKL
EECCCCCEEHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCEE
ESQRLIDLIINNRSTKKIRIHEKN
CHHHHHHHEECCCCCEEEEEEECC
>Mature Secondary Structure
MICLDTKKKVVKSVKSKQVNFYIMDRKTAMPTEIELELKKFELKISKLNKEEMFKELMLL
CEEECCHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHHHHE
KFDSENNFYFIKKYLSKHGMKISRQIIQKHNTDHVVIAFGYLSEKMHKLFKKTIFPEVKL
EECCCCCEEHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCEE
ESQRLIDLIINNRSTKKIRIHEKN
CHHHHHHHEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA